MII IG Kerndatensatz-Modul Molekulares Tumorboard, published by Medizininformatik-Initiative. This guide is not an authorized publication; it is the continuous build for version 2026.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/medizininformatik-initiative/kerndatensatzmodul-molekulares-tumorboard/ and changes regularly. See the Directory of published versions
Resource Profile: MII PR MTB Genomic Study Analysis
| Official URL: https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-pr-mtb-genomic-study-analysis | Version: 2026.0.0 | |||
| Active as of 2026-02-09 | Computable Name: MII_PR_MTB_Genomic_Study_Analysis | |||
Die Genomic Study Analysis beschreibt die Methodik einer bestimmten molekulargenetischen Untersuchung.
Usages:
- Refer to this Profile: MII PR MTB Genomic Study
- Examples for this Profile: Procedure/MII-EXA-MTB-GenomicStudyAnalysis-1, Procedure/mii-exa-mtb-kim-musterperson-genomic-study-analysis-1, Procedure/mii-exa-mtb-kim-musterperson-genomic-study-analysis-2 and Procedure/mii-exa-mtb-kim-musterperson-genomic-study-analysis-3
You can also check for usages in the FHIR IG Statistics
Formal Views of Profile Content
Description of Profiles, Differentials, Snapshots and how the different presentations work.
Terminology Bindings
| Path | Status | Usage | ValueSet | Version | Source |
| Procedure.extension:method-type.value[x] | Base | required | MII VS Genomic Analysis Method Type | 📦2026.0.0 | This IG |
| Procedure.status | Base | required | EventStatus | 📍4.0.1 | FHIR Std. |
| Procedure.category | Base | example | Procedure Category Codes (SNOMED CT) | 📦4.0.1 | FHIR Std. |
Constraints
| Id | Grade | Path(s) | Description | Expression |
| dom-2 | error | Procedure | If the resource is contained in another resource, it SHALL NOT contain nested Resources |
contained.contained.empty()
|
| dom-3 | error | Procedure | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource |
contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
|
| dom-4 | error | Procedure | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated |
contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
|
| dom-5 | error | Procedure | If a resource is contained in another resource, it SHALL NOT have a security label |
contained.meta.security.empty()
|
| dom-6 | best practice | Procedure | A resource should have narrative for robust management |
text.`div`.exists()
|
| ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children |
hasValue() or (children().count() > id.count())
|
| ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both |
extension.exists() != value.exists()
|
| ref-1 | error | Procedure.subject, Procedure.focalDevice.manipulated | SHALL have a contained resource if a local reference is provided |
reference.startsWith('#').not() or (reference.substring(1).trace('url') in %rootResource.contained.id.trace('ids'))
|
This structure is derived from MII_PR_MolGen_GenomicStudyAnalysis
| Name | Flags | Card. | Type | Description & Constraints Filter:   |
|---|---|---|---|---|
  Procedure |
0..* | MII_PR_MolGen_GenomicStudyAnalysis | An action that is being or was performed on a patient | |
  meta |
S | 0..1 | Meta | Metadata about the resource |
  profile |
S | 0..* | canonical(StructureDefinition) | Profiles this resource claims to conform to |
  extension |
S | 0..* | Extension | Extension |
 Slices for extension |
Content/Rules for all slices | |||
  extension:method-type |
0..* | GenomicStudyAnalysisMethodType | Analysemethode | |
  value[x] |
0..1 | CodeableConcept | cytogenetics | deletion-duplication-analysis | fish | sequence-analysis-of-the-entire-coding-region | ... (many) Binding: MII VS Genomic Analysis Method Type (required) | |
 extension:qc |
S | 0..1 | (Complex) | MII EX MTB Antrag GenomicsStudyAnalysis Metrics URL: https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc |
| identifier |
S | 0..* | Identifier | GenomicStudy.analysis.identifier |
| status |
S | 1..1 | code | preparation | in-progress | not-done | on-hold | stopped | completed | entered-in-error | unknown |
| category |
S | 1..1 | CodeableConcept | Classification of the procedure |
| performed[x] |
S | 0..1 | dateTime | GenomicStudy.analysis.date |
| Documentation for this format | ||||
Terminology Bindings (Differential)
| Path | Status | Usage | ValueSet | Version | Source |
| Procedure.extension:method-type.value[x] | Base | required | MII VS Genomic Analysis Method Type | 📦2026.0.0 | This IG |
| Name | Flags | Card. | Type | Description & Constraints Filter: | ||||
|---|---|---|---|---|---|---|---|---|
| Procedure |
0..* | MII_PR_MolGen_GenomicStudyAnalysis | An action that is being or was performed on a patient | |||||
 id |
Σ | 0..1 | id | Logical id of this artifact | ||||
 meta |
SΣ | 0..1 | Meta | Metadata about the resource | ||||
| id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url | |||||
| versionId |
Σ | 0..1 | id | Version specific identifier | ||||
| lastUpdated |
Σ | 0..1 | instant | When the resource version last changed | ||||
| source |
Σ | 0..1 | uri | Identifies where the resource comes from | ||||
| profile |
SΣ | 0..* | canonical(StructureDefinition) | Profiles this resource claims to conform to | ||||
| security |
Σ | 0..* | Coding | Security Labels applied to this resource Binding: All Security Labels (extensible): Security Labels from the Healthcare Privacy and Security Classification System. | ||||
| tag |
Σ | 0..* | Coding | Tags applied to this resource Binding: CommonTags (example): Codes that represent various types of tags, commonly workflow-related; e.g. "Needs review by Dr. Jones". | ||||
| implicitRules |
?!Σ | 0..1 | uri | A set of rules under which this content was created | ||||
| language |
0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
| |||||
| text |
0..1 | Narrative | Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements | |||||
| contained |
0..* | Resource | Contained, inline Resources | |||||
| Slices for extension |
S | 0..* | Extension | Extension Slice: Unordered, Open by value:url | ||||
| extension:method-type |
S | 0..* | (Complex) | Analysemethode URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-method-type | ||||
 id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||||||
| url |
1..1 | uri | "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-method-type" | |||||
| value[x] |
0..1 | CodeableConcept | cytogenetics | deletion-duplication-analysis | fish | sequence-analysis-of-the-entire-coding-region | ... (many) Binding: MII VS Genomic Analysis Method Type (required) | |||||
 extension:change-type |
S | 0..* | CodeableConcept | Untersuchte Variationstypen URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-change-type Binding: Genomic Study Change Type ValueSet (preferred) | ||||
| extension:genome-build |
S | 0..1 | CodeableConcept | Referenzgenom-Version URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-genome-build Binding: LOINC Answer List LL1040-6 (extensible) | ||||
| extension:genomic-source-class |
0..1 | CodeableConcept | GenomicStudy.analysis.genomicSourceClass URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-genomic-source-class Binding: LOINC Answer List LL378-1 (extensible) | |||||
| extension:title |
S | 0..1 | string | Bezeichnung der Analyse URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-title | ||||
| extension:focus |
S | 0..* | Reference(Resource) | Fokus der Analyse URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-focus | ||||
| extension:specimen |
S | 0..* | Reference(Specimen) | Untersuchte Probe URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-specimen | ||||
| extension:metrics |
S | 0..1 | (Complex) | Qualitätsmetriken URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-metrics | ||||
| extension:regions |
S | 0..1 | (Complex) | Untersuchte genomische Regionen URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-regions | ||||
| extension:device |
S | 0..* | (Complex) | Verwendetes Analysegerät URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-device | ||||
| extension:protocol-performed |
0..1 | Reference(Procedure | Task) | GenomicStudy.protocolPerformed URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-protocol-performed | |||||
| extension:input |
0..* | (Complex) | GenomicStudy.analysis.input URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-input | |||||
| extension:output |
0..* | (Complex) | GenomicStudy.analysis.output URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-output | |||||
| extension:qc |
S | 0..1 | (Complex) | MII EX MTB Antrag GenomicsStudyAnalysis Metrics URL: https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc | ||||
 modifierExtension |
?! | 0..* | Extension | Extensions that cannot be ignored Slice: Unordered, Open by value:url | ||||
| identifier |
SΣ | 0..* | Identifier | GenomicStudy.analysis.identifier | ||||
| instantiatesCanonical |
Σ | 0..* | canonical(PlanDefinition | ActivityDefinition) | GenomicStudy.analysis.instantiatesCanonical | ||||
| instantiatesUri |
Σ | 0..* | uri | GenomicStudy.analysis.instantiatesUri | ||||
| status |
?!SΣ | 1..1 | code | preparation | in-progress | not-done | on-hold | stopped | completed | entered-in-error | unknown Binding: EventStatus (required): A code specifying the state of the procedure. Required Pattern: completed | ||||
| category |
SΣ | 1..1 | CodeableConcept | Classification of the procedure Binding: ProcedureCategoryCodes(SNOMEDCT) (example): A code that classifies a procedure for searching, sorting and display purposes. | ||||
| id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url | |||||
| coding |
Σ | 1..1 | Coding | Code defined by a terminology system Required Pattern: At least the following | ||||
| id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..* | Extension | Additional content defined by implementations | |||||
 system |
1..1 | uri | Identity of the terminology system Fixed Value: http://terminology.hl7.org/CodeSystem/observation-category | |||||
| version |
0..1 | string | Version of the system - if relevant | |||||
| code |
1..1 | code | Symbol in syntax defined by the system Fixed Value: laboratory | |||||
| display |
0..1 | string | Representation defined by the system | |||||
| userSelected |
0..1 | boolean | If this coding was chosen directly by the user | |||||
| text |
Σ | 0..1 | string | Plain text representation of the concept | ||||
 subject |
ΣC | 1..1 | Reference(Patient | Group) | Who the procedure was performed on Constraints: ref-1 | ||||
| performed[x] |
SΣ | 0..1 | dateTime | GenomicStudy.analysis.date | ||||
| performer |
Σ | 0..* | BackboneElement | The people who performed the procedure | ||||
| id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url | |||||
| modifierExtension |
?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
| function |
Σ | 0..1 | CodeableConcept | GenomicStudy.analysis.performer.role Binding: ProcedurePerformerRoleCodes (example): A code that identifies the role of a performer of the procedure. | ||||
| actor |
ΣC | 1..1 | Reference(Practitioner | PractitionerRole | Organization | Device) | GenomicStudy.analysis.performer.actor Constraints: ref-1 | ||||
| onBehalfOf |
C | 0..1 | Reference(Organization) | Organization the device or practitioner was acting for Constraints: ref-1 | ||||
| note |
0..* | Annotation | GenomicStudy.analysis.note | |||||
| Documentation for this format | ||||||||
Terminology Bindings
| Path | Status | Usage | ValueSet | Version | Source |
| Procedure.meta.security | Base | extensible | SecurityLabels | 📍4.0.1 | FHIR Std. |
| Procedure.meta.tag | Base | example | Common Tags | 📍4.0.1 | FHIR Std. |
| Procedure.language | Base | preferred | Common Languages | 📦4.0.1 | FHIR Std. |
| Procedure.extension:method-type.value[x] | Base | required | MII VS Genomic Analysis Method Type | 📦2026.0.0 | This IG |
| Procedure.status | Base | required | EventStatus | 📍4.0.1 | FHIR Std. |
| Procedure.category | Base | example | Procedure Category Codes (SNOMED CT) | 📦4.0.1 | FHIR Std. |
| Procedure.performer.function | Base | example | Procedure Performer Role Codes | 📦4.0.1 | FHIR Std. |
| Procedure.focalDevice.action | Base | preferred | Procedure Device Action Codes | 📦4.0.1 | FHIR Std. |
Constraints
| Id | Grade | Path(s) | Description | Expression |
| dom-2 | error | Procedure | If the resource is contained in another resource, it SHALL NOT contain nested Resources |
contained.contained.empty()
|
| dom-3 | error | Procedure | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource |
contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
|
| dom-4 | error | Procedure | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated |
contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
|
| dom-5 | error | Procedure | If a resource is contained in another resource, it SHALL NOT have a security label |
contained.meta.security.empty()
|
| dom-6 | best practice | Procedure | A resource should have narrative for robust management |
text.`div`.exists()
|
| ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children |
hasValue() or (children().count() > id.count())
|
| ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both |
extension.exists() != value.exists()
|
| ref-1 | error | Procedure.subject, Procedure.performer.actor, Procedure.performer.onBehalfOf, Procedure.focalDevice.manipulated | SHALL have a contained resource if a local reference is provided |
reference.startsWith('#').not() or (reference.substring(1).trace('url') in %rootResource.contained.id.trace('ids'))
|
This structure is derived from MII_PR_MolGen_GenomicStudyAnalysis
Key Elements View
Terminology Bindings
| Path | Status | Usage | ValueSet | Version | Source |
| Procedure.extension:method-type.value[x] | Base | required | MII VS Genomic Analysis Method Type | 📦2026.0.0 | This IG |
| Procedure.status | Base | required | EventStatus | 📍4.0.1 | FHIR Std. |
| Procedure.category | Base | example | Procedure Category Codes (SNOMED CT) | 📦4.0.1 | FHIR Std. |
Constraints
| Id | Grade | Path(s) | Description | Expression |
| dom-2 | error | Procedure | If the resource is contained in another resource, it SHALL NOT contain nested Resources |
contained.contained.empty()
|
| dom-3 | error | Procedure | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource |
contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
|
| dom-4 | error | Procedure | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated |
contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
|
| dom-5 | error | Procedure | If a resource is contained in another resource, it SHALL NOT have a security label |
contained.meta.security.empty()
|
| dom-6 | best practice | Procedure | A resource should have narrative for robust management |
text.`div`.exists()
|
| ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children |
hasValue() or (children().count() > id.count())
|
| ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both |
extension.exists() != value.exists()
|
| ref-1 | error | Procedure.subject, Procedure.focalDevice.manipulated | SHALL have a contained resource if a local reference is provided |
reference.startsWith('#').not() or (reference.substring(1).trace('url') in %rootResource.contained.id.trace('ids'))
|
Differential View
This structure is derived from MII_PR_MolGen_GenomicStudyAnalysis
| Name | Flags | Card. | Type | Description & Constraints Filter: |
|---|---|---|---|---|
| Procedure |
0..* | MII_PR_MolGen_GenomicStudyAnalysis | An action that is being or was performed on a patient | |
| meta |
S | 0..1 | Meta | Metadata about the resource |
| profile |
S | 0..* | canonical(StructureDefinition) | Profiles this resource claims to conform to |
| extension |
S | 0..* | Extension | Extension |
| Slices for extension |
Content/Rules for all slices | |||
| extension:method-type |
0..* | GenomicStudyAnalysisMethodType | Analysemethode | |
| value[x] |
0..1 | CodeableConcept | cytogenetics | deletion-duplication-analysis | fish | sequence-analysis-of-the-entire-coding-region | ... (many) Binding: MII VS Genomic Analysis Method Type (required) | |
| extension:qc |
S | 0..1 | (Complex) | MII EX MTB Antrag GenomicsStudyAnalysis Metrics URL: https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc |
| identifier |
S | 0..* | Identifier | GenomicStudy.analysis.identifier |
| status |
S | 1..1 | code | preparation | in-progress | not-done | on-hold | stopped | completed | entered-in-error | unknown |
| category |
S | 1..1 | CodeableConcept | Classification of the procedure |
| performed[x] |
S | 0..1 | dateTime | GenomicStudy.analysis.date |
| Documentation for this format | ||||
Terminology Bindings (Differential)
| Path | Status | Usage | ValueSet | Version | Source |
| Procedure.extension:method-type.value[x] | Base | required | MII VS Genomic Analysis Method Type | 📦2026.0.0 | This IG |
Snapshot View
| Name | Flags | Card. | Type | Description & Constraints Filter: | ||||
|---|---|---|---|---|---|---|---|---|
| Procedure |
0..* | MII_PR_MolGen_GenomicStudyAnalysis | An action that is being or was performed on a patient | |||||
| id |
Σ | 0..1 | id | Logical id of this artifact | ||||
| meta |
SΣ | 0..1 | Meta | Metadata about the resource | ||||
| id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url | |||||
| versionId |
Σ | 0..1 | id | Version specific identifier | ||||
| lastUpdated |
Σ | 0..1 | instant | When the resource version last changed | ||||
| source |
Σ | 0..1 | uri | Identifies where the resource comes from | ||||
| profile |
SΣ | 0..* | canonical(StructureDefinition) | Profiles this resource claims to conform to | ||||
| security |
Σ | 0..* | Coding | Security Labels applied to this resource Binding: All Security Labels (extensible): Security Labels from the Healthcare Privacy and Security Classification System. | ||||
| tag |
Σ | 0..* | Coding | Tags applied to this resource Binding: CommonTags (example): Codes that represent various types of tags, commonly workflow-related; e.g. "Needs review by Dr. Jones". | ||||
| implicitRules |
?!Σ | 0..1 | uri | A set of rules under which this content was created | ||||
| language |
0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
| |||||
| text |
0..1 | Narrative | Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements | |||||
| contained |
0..* | Resource | Contained, inline Resources | |||||
| Slices for extension |
S | 0..* | Extension | Extension Slice: Unordered, Open by value:url | ||||
| extension:method-type |
S | 0..* | (Complex) | Analysemethode URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-method-type | ||||
| id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||||||
| url |
1..1 | uri | "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-method-type" | |||||
| value[x] |
0..1 | CodeableConcept | cytogenetics | deletion-duplication-analysis | fish | sequence-analysis-of-the-entire-coding-region | ... (many) Binding: MII VS Genomic Analysis Method Type (required) | |||||
| extension:change-type |
S | 0..* | CodeableConcept | Untersuchte Variationstypen URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-change-type Binding: Genomic Study Change Type ValueSet (preferred) | ||||
| extension:genome-build |
S | 0..1 | CodeableConcept | Referenzgenom-Version URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-genome-build Binding: LOINC Answer List LL1040-6 (extensible) | ||||
| extension:genomic-source-class |
0..1 | CodeableConcept | GenomicStudy.analysis.genomicSourceClass URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-genomic-source-class Binding: LOINC Answer List LL378-1 (extensible) | |||||
| extension:title |
S | 0..1 | string | Bezeichnung der Analyse URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-title | ||||
| extension:focus |
S | 0..* | Reference(Resource) | Fokus der Analyse URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-focus | ||||
| extension:specimen |
S | 0..* | Reference(Specimen) | Untersuchte Probe URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-specimen | ||||
| extension:metrics |
S | 0..1 | (Complex) | Qualitätsmetriken URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-metrics | ||||
| extension:regions |
S | 0..1 | (Complex) | Untersuchte genomische Regionen URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-regions | ||||
| extension:device |
S | 0..* | (Complex) | Verwendetes Analysegerät URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-device | ||||
| extension:protocol-performed |
0..1 | Reference(Procedure | Task) | GenomicStudy.protocolPerformed URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-protocol-performed | |||||
| extension:input |
0..* | (Complex) | GenomicStudy.analysis.input URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-input | |||||
| extension:output |
0..* | (Complex) | GenomicStudy.analysis.output URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-output | |||||
| extension:qc |
S | 0..1 | (Complex) | MII EX MTB Antrag GenomicsStudyAnalysis Metrics URL: https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc | ||||
| modifierExtension |
?! | 0..* | Extension | Extensions that cannot be ignored Slice: Unordered, Open by value:url | ||||
| identifier |
SΣ | 0..* | Identifier | GenomicStudy.analysis.identifier | ||||
| instantiatesCanonical |
Σ | 0..* | canonical(PlanDefinition | ActivityDefinition) | GenomicStudy.analysis.instantiatesCanonical | ||||
| instantiatesUri |
Σ | 0..* | uri | GenomicStudy.analysis.instantiatesUri | ||||
| status |
?!SΣ | 1..1 | code | preparation | in-progress | not-done | on-hold | stopped | completed | entered-in-error | unknown Binding: EventStatus (required): A code specifying the state of the procedure. Required Pattern: completed | ||||
| category |
SΣ | 1..1 | CodeableConcept | Classification of the procedure Binding: ProcedureCategoryCodes(SNOMEDCT) (example): A code that classifies a procedure for searching, sorting and display purposes. | ||||
| id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url | |||||
| coding |
Σ | 1..1 | Coding | Code defined by a terminology system Required Pattern: At least the following | ||||
| id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..* | Extension | Additional content defined by implementations | |||||
| system |
1..1 | uri | Identity of the terminology system Fixed Value: http://terminology.hl7.org/CodeSystem/observation-category | |||||
| version |
0..1 | string | Version of the system - if relevant | |||||
| code |
1..1 | code | Symbol in syntax defined by the system Fixed Value: laboratory | |||||
| display |
0..1 | string | Representation defined by the system | |||||
| userSelected |
0..1 | boolean | If this coding was chosen directly by the user | |||||
| text |
Σ | 0..1 | string | Plain text representation of the concept | ||||
| subject |
ΣC | 1..1 | Reference(Patient | Group) | Who the procedure was performed on Constraints: ref-1 | ||||
| performed[x] |
SΣ | 0..1 | dateTime | GenomicStudy.analysis.date | ||||
| performer |
Σ | 0..* | BackboneElement | The people who performed the procedure | ||||
| id |
0..1 | string | Unique id for inter-element referencing | |||||
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url | |||||
| modifierExtension |
?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
| function |
Σ | 0..1 | CodeableConcept | GenomicStudy.analysis.performer.role Binding: ProcedurePerformerRoleCodes (example): A code that identifies the role of a performer of the procedure. | ||||
| actor |
ΣC | 1..1 | Reference(Practitioner | PractitionerRole | Organization | Device) | GenomicStudy.analysis.performer.actor Constraints: ref-1 | ||||
| onBehalfOf |
C | 0..1 | Reference(Organization) | Organization the device or practitioner was acting for Constraints: ref-1 | ||||
| note |
0..* | Annotation | GenomicStudy.analysis.note | |||||
| Documentation for this format | ||||||||
Terminology Bindings
| Path | Status | Usage | ValueSet | Version | Source |
| Procedure.meta.security | Base | extensible | SecurityLabels | 📍4.0.1 | FHIR Std. |
| Procedure.meta.tag | Base | example | Common Tags | 📍4.0.1 | FHIR Std. |
| Procedure.language | Base | preferred | Common Languages | 📦4.0.1 | FHIR Std. |
| Procedure.extension:method-type.value[x] | Base | required | MII VS Genomic Analysis Method Type | 📦2026.0.0 | This IG |
| Procedure.status | Base | required | EventStatus | 📍4.0.1 | FHIR Std. |
| Procedure.category | Base | example | Procedure Category Codes (SNOMED CT) | 📦4.0.1 | FHIR Std. |
| Procedure.performer.function | Base | example | Procedure Performer Role Codes | 📦4.0.1 | FHIR Std. |
| Procedure.focalDevice.action | Base | preferred | Procedure Device Action Codes | 📦4.0.1 | FHIR Std. |
Constraints
| Id | Grade | Path(s) | Description | Expression |
| dom-2 | error | Procedure | If the resource is contained in another resource, it SHALL NOT contain nested Resources |
contained.contained.empty()
|
| dom-3 | error | Procedure | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource |
contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
|
| dom-4 | error | Procedure | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated |
contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
|
| dom-5 | error | Procedure | If a resource is contained in another resource, it SHALL NOT have a security label |
contained.meta.security.empty()
|
| dom-6 | best practice | Procedure | A resource should have narrative for robust management |
text.`div`.exists()
|
| ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children |
hasValue() or (children().count() > id.count())
|
| ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both |
extension.exists() != value.exists()
|
| ref-1 | error | Procedure.subject, Procedure.performer.actor, Procedure.performer.onBehalfOf, Procedure.focalDevice.manipulated | SHALL have a contained resource if a local reference is provided |
reference.startsWith('#').not() or (reference.substring(1).trace('url') in %rootResource.contained.id.trace('ids'))
|
This structure is derived from MII_PR_MolGen_GenomicStudyAnalysis
Other representations of profile: CSV, Excel, Schematron