MII IG Kerndatensatz-Modul Molekulares Tumorboard, published by Medizininformatik-Initiative. This guide is not an authorized publication; it is the continuous build for version 2026.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/medizininformatik-initiative/kerndatensatzmodul-molekulares-tumorboard/ and changes regularly. See the Directory of published versions
Extension: MII EX MTB Antrag GenomicsStudyAnalysis Metrics
| Official URL: https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc | Version: 2026.0.0 | |||
| Active as of 2026-02-09 | Computable Name: MII_EX_MTB_GenomicStudyAnalysis_QC | |||
Sequenzierbezogenen Metriken der Genomic Study Analysis
Context of Use
- Extension: Extension
This extension may be used on the following element(s)
Usage info
Usages:
- Use this Extension: MII PR MTB Genomic Study Analysis
You can also check for usages in the FHIR IG Statistics
Formal Views of Extension Content
Description of Profiles, Differentials, Snapshots, and how the XML and JSON presentations work.
This structure is derived from Extension
| Name | Flags | Card. | Type | Description & Constraints Filter:   |
|---|---|---|---|---|
  Extension |
0..* | Extension | MII EX MTB Antrag GenomicsStudyAnalysis Metrics | |
  Slices for extension |
Content/Rules for all slices | |||
   extension:read-depth |
S | 0..1 | Extension | Extension |
   extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "read-depth" |
 Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Open by type:$this | |
  value[x]:valueQuantity |
S | 1..1 | Quantity | Lesetiefe |
| extension:read-length |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "read-length" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Leselaenge |
| extension:sequencing-coverage |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "sequencing-coverage" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Sequenzierabdeckung |
| extension:metrics-description |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "metrics-description" |
| Slices for value[x] |
1..1 | string | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueString |
S | 1..1 | string | Metrikbeschreibung |
| extension:sequencing-read-type |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "sequencing-read-type" |
| Slices for value[x] |
1..1 | CodeableConcept | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueCodeableConcept |
S | 1..1 | CodeableConcept | Sequenzier-Lesetyp |
 extension:gap-statistics |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "gap-statistics" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Lueckenstatistik |
 url |
1..1 | uri | "https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc" | |
 value[x] |
0..0 | Value of extension | ||
| Documentation for this format | ||||
| Name | Flags | Card. | Type | Description & Constraints Filter: |
|---|---|---|---|---|
| Extension |
0..* | Extension | MII EX MTB Antrag GenomicsStudyAnalysis Metrics | |
 id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url | |
| extension:read-depth |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "read-depth" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Lesetiefe |
| extension:read-length |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "read-length" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Leselaenge |
| extension:sequencing-coverage |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "sequencing-coverage" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Sequenzierabdeckung |
| extension:metrics-description |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "metrics-description" |
| Slices for value[x] |
1..1 | string | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueString |
S | 1..1 | string | Metrikbeschreibung |
| extension:sequencing-read-type |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "sequencing-read-type" |
| Slices for value[x] |
1..1 | CodeableConcept | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueCodeableConcept |
S | 1..1 | CodeableConcept | Sequenzier-Lesetyp |
| extension:gap-statistics |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "gap-statistics" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Lueckenstatistik |
| url |
1..1 | uri | "https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc" | |
| Documentation for this format | ||||
This structure is derived from Extension
Summary
Complex Extension: Sequenzierbezogenen Metriken der Genomic Study Analysis
- read-depth: Quantity: An Extension
- read-length: Quantity: An Extension
- sequencing-coverage: Quantity: An Extension
- metrics-description: string: An Extension
- sequencing-read-type: CodeableConcept: An Extension
- gap-statistics: Quantity: An Extension
Differential View
This structure is derived from Extension
| Name | Flags | Card. | Type | Description & Constraints Filter: |
|---|---|---|---|---|
| Extension |
0..* | Extension | MII EX MTB Antrag GenomicsStudyAnalysis Metrics | |
| Slices for extension |
Content/Rules for all slices | |||
| extension:read-depth |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "read-depth" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Lesetiefe |
| extension:read-length |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "read-length" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Leselaenge |
| extension:sequencing-coverage |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "sequencing-coverage" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Sequenzierabdeckung |
| extension:metrics-description |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "metrics-description" |
| Slices for value[x] |
1..1 | string | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueString |
S | 1..1 | string | Metrikbeschreibung |
| extension:sequencing-read-type |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "sequencing-read-type" |
| Slices for value[x] |
1..1 | CodeableConcept | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueCodeableConcept |
S | 1..1 | CodeableConcept | Sequenzier-Lesetyp |
| extension:gap-statistics |
S | 0..1 | Extension | Extension |
| extension |
0..0 | Extension | ||
| url |
S | 1..1 | uri | "gap-statistics" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Open by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Lueckenstatistik |
| url |
1..1 | uri | "https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc" | |
| value[x] |
0..0 | Value of extension | ||
| Documentation for this format | ||||
Snapshot View
| Name | Flags | Card. | Type | Description & Constraints Filter: |
|---|---|---|---|---|
| Extension |
0..* | Extension | MII EX MTB Antrag GenomicsStudyAnalysis Metrics | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url | |
| extension:read-depth |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "read-depth" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Lesetiefe |
| extension:read-length |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "read-length" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Leselaenge |
| extension:sequencing-coverage |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "sequencing-coverage" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Sequenzierabdeckung |
| extension:metrics-description |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "metrics-description" |
| Slices for value[x] |
1..1 | string | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueString |
S | 1..1 | string | Metrikbeschreibung |
| extension:sequencing-read-type |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "sequencing-read-type" |
| Slices for value[x] |
1..1 | CodeableConcept | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueCodeableConcept |
S | 1..1 | CodeableConcept | Sequenzier-Lesetyp |
| extension:gap-statistics |
S | 0..1 | Extension | Extension |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..0 | Extension Slice: Unordered, Open by value:url | ||
| url |
S | 1..1 | uri | "gap-statistics" |
| Slices for value[x] |
1..1 | Quantity | Value of extension Slice: Unordered, Closed by type:$this | |
| value[x]:valueQuantity |
S | 1..1 | Quantity | Lueckenstatistik |
| url |
1..1 | uri | "https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc" | |
| Documentation for this format | ||||
This structure is derived from Extension
Summary
Complex Extension: Sequenzierbezogenen Metriken der Genomic Study Analysis
- read-depth: Quantity: An Extension
- read-length: Quantity: An Extension
- sequencing-coverage: Quantity: An Extension
- metrics-description: string: An Extension
- sequencing-read-type: CodeableConcept: An Extension
- gap-statistics: Quantity: An Extension
Other representations of profile: CSV, Excel, Schematron
Constraints
| Id | Grade | Path(s) | Description | Expression |
| ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children |
hasValue() or (children().count() > id.count())
|
| ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both |
extension.exists() != value.exists()
|