ICHOM FHIR Implementation Guide: Breast Cancer, published by ICHOM. This is not an authorized publication; it is the continuous build for version 0.0.1). This version is based on the current content of https://github.com/HL7/fhir-ichom-breast-cancer-ig/ and changes regularly. See the Directory of published versions
Bundle DebugBaselineTumorFactorsBundle of type transaction
Entry 1
Request:
PUT CodeSystem/HistologicalTypeCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/histological-type defines the following codes:
Code Display 0 Ductal carcinoma in situ 1 Invasive ductal carcinoma 2 Invasive lobular carcinoma 3 Other 999 unknown
Entry 2
Request:
PUT CodeSystem/GeneticMutationCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/genetic-mutation defines the following codes:
Code Display 0 No mutation 1 BRCA 1 2 BRCA 2 3 Other mutation 4 Not tested
Entry 3
Request:
PUT CodeSystem/InvasionGradeCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/invasion-grade defines the following codes:
Code Display 0 Grade 1 1 Grade 2 2 Grade 3 3 Not reported
Entry 4
Request:
PUT CodeSystem/TumorGradeCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/tumor-grade defines the following codes:
Code Display 0 Low 1 Intermediate 2 High 3 Not reported
Entry 5
Request:
PUT CodeSystem/ClinicalTumorStageCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/clinical-tumor-stage defines the following codes:
Code Display 0 cTX 1 cT0 2 cTis 3 cT1 4 cT2 5 cT3 6 cT4 999 Unknown
Entry 6
Request:
PUT CodeSystem/ClinicalNodalStageCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/clinical-nodal-stage defines the following codes:
Code Display 0 cNX 1 cN0 2 cN1 3 cN2 4 cN3 999 Unknown
Entry 7
Request:
PUT CodeSystem/ClinicalDistantMetastasisCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/clinical-distant-metastasis defines the following codes:
Code Display 0 cMX 1 cM0 2 cM1 999 Unknown
Entry 8
Request:
PUT CodeSystem/PathologicalTumorStageCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/pathological-tumor-stage defines the following codes:
Code Display 0 pTX 1 pT0 2 pTis 3 pT1 4 pT2 5 pT3 6 pT4 999 Unknown
Entry 9
Request:
PUT CodeSystem/PathologicalNodalStageCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/pathological-nodal-stage defines the following codes:
Code Display 0 pNX 1 pN0 2 pN1 3 pN2 4 pN3 999 Unknown
Entry 10
Request:
PUT CodeSystem/PathologicalDistantMetastasisCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/pathological-distant-metastasis defines the following codes:
Code Display 0 pMx 1 pM0 2 pM1 999 Unknown
Entry 11
Request:
PUT CodeSystem/HER2ReceptorStatusCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/her2-receptor-status defines the following codes:
Code Display 0 Negative 1 Positive 2 Equivocal 3 HER2 receptor status not tested
Entry 12
Request:
PUT CodeSystem/ReceptorStatusCodeSystem
Resource CodeSystem:
This code system http://connect.ichom.org/fhir/CodeSystem/receptor-status defines the following codes:
Code Display 0 No 1 Yes 2 Not performed 999 Unkown
Entry 13
Request:
PUT ValueSet/HistologicalType
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/histological-type
Entry 14
Request:
PUT ValueSet/GeneticMutation
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/genetic-mutation
Entry 15
Request:
PUT ValueSet/InvasionGrade
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/invasion-grade
Entry 16
Request:
PUT ValueSet/TumorGrade
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/tumor-grade
Entry 17
Request:
PUT ValueSet/ClinicalTumorStage
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/clinical-tumor-stage
Entry 18
Request:
PUT ValueSet/ClinicalNodalStage
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/clinical-tumor-stage
Entry 19
Request:
PUT ValueSet/ClinicalDistantMetastasis
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/clinical-distant-metastasis
Entry 20
Request:
PUT ValueSet/PathologicalTumorStage
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/pathological-tumor-stage
Entry 21
Request:
PUT ValueSet/PathologicalNodalStage
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/pathological-nodal-stage
Entry 22
Request:
PUT ValueSet/PathologicalDistantMetastasis
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/pathological-distant-metastasis
Entry 23
Request:
PUT ValueSet/ReceptorStatus
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/receptor-status
Entry 24
Request:
PUT ValueSet/HER2ReceptorStatus
Resource ValueSet:
- Include all codes defined in
http://connect.ichom.org/fhir/CodeSystem/her2-receptor-status
Entry 25
Request:
PUT Questionnaire/BaselineTumorFactors
Resource Questionnaire:
LinkId Text Cardinality Type Description & Constraints BaselineTumorFactors
Questionnaire https://connect.ichom.org/fhir/Questionnaire/BaselineTumorFactors HistologicalDiagnosisDate
The initial date of histological diagnosis 0..1 date HISTOTYPE
Indicate histologic type of the tumor (select all that apply) 1..* choice Value Set: Historical Type MUTBC
Indicate if the patient carries a genetic mutation predisposing breast cancer 1..1 choice Value Set: Genetic Mutation GRADEINV
Indicate grade of invasive component of tumor 1..1 choice Value Set: Invasion Grade GRADEDCIS
Indicate tumor grade of DCIS component of tumor 1..1 choice Value Set: Tumor Grade received_neoadjuvant_therapy
Has the patient received neoadjuvant therapy? 1..1 boolean TNMCT_BREAST
Clinical tumor stage (per AJCC 5th - 7th Ed.) 0..1 choice Enable When: received_neoadjuvant_therapy = true
Value Set: Clinical Tumor StageTNMCN_BREAST
Clinical nodal stage (per AJCC 5th - 7th Ed.) 0..1 choice Enable When: received_neoadjuvant_therapy = true
Value Set: Clinical Nodal StageTNMCM_BREAST
Clinical distant metastasis (per AJCC 5th - 7th Ed.) 0..1 choice Enable When: received_neoadjuvant_therapy = true
Value Set: Clinical Distant Metastasisreceived_surgery
Has the patient received surgery? 1..1 boolean TNMPT_BREAST
Pathological tumor stage (per AJCC 5th - 7th Ed.) 0..1 choice Enable When: received_surgery = true
Value Set: Pathological Tumor StageTNMPN_BREAST
Pathological nodal stage (per AJCC 5th - 7th Ed.) 0..1 choice Enable When: received_surgery = true
Value Set: Pathological Nodal StageTNMPM_BREAST
Pathological distant metastasis (per AJCC 5th - 7th Ed.) 0..1 choice Enable When: received_surgery = true
Value Set: Pathological Distant MetastasisSIZEINV
Indicate size of invasive component of tumor (in mm, 999 if unknown) 1..1 integer Enable When: received_surgery = true
Initial Value: integer = 999NumLymphNodesResect
Number of lymph nodes resected (999 if unknown) 1..1 integer Enable When: received_surgery = true
Initial Value: integer = 999LYMPHINV_BREAST
Number of lymph nodes involved according to the TNM stage AJCC 7th Ed. (999 if unknown) 1..1 integer Enable When: received_surgery = true
Initial Value: integer = 999ERSTATUS
Indicate if the estrogen receptor status is positive 1..1 choice Enable When: received_surgery = true
Value Set: ReceptorStatusPRSTATUS
Indicate if the progesterone receptor status is positive 1..1 choice Enable When: received_surgery = true
Value Set: ReceptorStatusHER2STATUS
Indicate if the HER2 receptor status is positive 0..1 choice Enable When: received_surgery = true
Value Set: HER2 Receptor StatusDocumentation for this format