Release 5 Preview #3

Provenance-example-biocompute-object.json

Security Work GroupMaturity Level: N/AStandards Status: InformativeCompartments: Device, Patient, Practitioner, RelatedPerson

Raw JSON (canonical form + also see JSON Format Specification)

Provenance example for Biocompute objects

{
  "resourceType": "Provenance",
  "id": "example-biocompute-object",
  "text": {
    "status": "generated",
    "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n\t\t\t<p>\n\t\t\t\t<b>Generated Narrative with Details</b>\n\t\t\t</p><p>\n\t\t\t\t<b>id</b>: example-biocompute-object</p><p>\n\t\t\t\t<b>target</b>: <a href=\"http://build.fhir.org/sequence-example.html\">MolecularSequence/example</a>\n\t\t\t</p><p>\n\t\t\t\t<b>period</b>: 2017-6-6 --&gt; (ongoing)</p><p>\n\t\t\t\t<b>recorded</b>: 2016-6-9 8:12:14</p><p>\n\t\t\t\t<b>reason</b>: antiviral resistance detection (Details: [not stated] code null = 'null', stated as\n         'antiviral resistance detection')</p>\n\t\t\t<h3>Agents</h3>\n\t\t\t<table>\n\t\t\t\t<tr>\n\t\t\t\t\t<td>-</td>\n\t\t\t\t\t<td>\n\t\t\t\t\t\t<b>Role</b>\n\t\t\t\t\t</td>\n\t\t\t\t\t<td>\n\t\t\t\t\t\t<b>Who</b>\n\t\t\t\t\t</td>\n\t\t\t\t</tr>\n\t\t\t\t<tr>\n\t\t\t\t\t<td>*</td>\n\t\t\t\t\t<td>Author (Details: http://hl7.org/fhir/provenance-participant-role code author = 'Author',\n             stated as 'null')</td>\n\t\t\t\t\t<td>\n\t\t\t\t\t\t<a href=\"http://build.fhir.org/practitioner-example.html\">Practitioner/example</a>\n\t\t\t\t\t</td>\n\t\t\t\t</tr>\n\t\t\t</table>\n\t\t\t<h3>Entities</h3>\n\t\t\t<table>\n\t\t\t\t<tr>\n\t\t\t\t\t<td>-</td>\n\t\t\t\t\t<td>\n\t\t\t\t\t\t<b>Role</b>\n\t\t\t\t\t</td>\n\t\t\t\t\t<td>\n\t\t\t\t\t\t<b>Reference</b>\n\t\t\t\t\t</td>\n\t\t\t\t</tr>\n\t\t\t\t<tr>\n\t\t\t\t\t<td>*</td>\n\t\t\t\t\t<td>source</td>\n\t\t\t\t\t<td>\n\t\t\t\t\t\t<a href=\"https://hive.biochemistry.gwu.edu/cgi-bin/prd/htscsrs/servlet.cgi?pageid=bcoexample_1\">Biocompute example</a>\n\t\t\t\t\t</td>\n\t\t\t\t</tr>\n\t\t\t</table>\n\t\t</div>"
  },
  "target": [
    {
      "reference": "MolecularSequence/example"
    }
  ],
  "occurredPeriod": {
    "start": "2017-06-06"
  },
  "recorded": "2016-06-09T08:12:14+10:00",
  "reason": [
    {
      "text": "antiviral resistance detection"
    }
  ],
  "agent": [
    {
      "type": {
        "coding": [
          {
            "system": "http://terminology.hl7.org/CodeSystem/v3-ParticipationType",
            "code": "AUT"
          }
        ]
      },
      "who": {
        "reference": "Practitioner/example"
      }
    }
  ],
  "entity": [
    {
      "role": "source",
      "what": {
        "identifier": {
          "type": {
            "coding": [
              {
                "system": "https://hive.biochemistry.gwu.edu",
                "code": "biocompute",
                "display": "obj.1001"
              }
            ]
          },
          "value": "https://hive.biochemistry.gwu.edu/cgi-bin/prd/htscsrs/servlet.cgi?pageid=bcoexample_1"
        }
      }
    }
  ]
}

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.