HL7 FHIR Implementation Guide Laboratory Report
0.2.0 - trial-use Italy flag

HL7 FHIR Implementation Guide Laboratory Report, published by HL7 Italia. This guide is not an authorized publication; it is the continuous build for version 0.2.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-it/lab-report/ and changes regularly. See the Directory of published versions

Resource Profile: Specimen - Lab Report

Official URL: http://hl7.it/fhir/lab-report/StructureDefinition/specimen-it-lab Version: 0.2.0
Standards status: Trial-use Maturity Level: 1 Computable Name: SpecimenRefertoLabIt

Descrizione delle informazioni del campione tramite il profilo della risorsa Specimen per il referto di laboratorio.

Usages:

You can also check for usages in the FHIR IG Statistics

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* SpecimenEu Campione Referto di Laboratorio
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... modifierExtension ?! 0..* Extension Extensions that cannot be ignored
... identifier Σ 0..* Identifier Identificativo esterno del campione (identificativo locale al LIS)
... type Σ 1..1 CodeableConcept Tipo di campione.
Binding: Tipo Campione (preferred)
... subject Σ 0..1 Reference(Patient - Lab Report) Soggetto da cui è stato prelevato il campione.

doco Documentation for this format

Terminology Bindings

Path Status Usage ValueSet Version Source
Specimen.status Base required SpecimenStatus 📍4.0.1 FHIR Std.
Specimen.type Base preferred Tipo Campione 📦0.2.0 This IG

Constraints

Id Grade Path(s) Description Expression
dom-2 error Specimen If the resource is contained in another resource, it SHALL NOT contain nested Resources contained.contained.empty()
dom-3 error Specimen If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4 error Specimen If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5 error Specimen If a resource is contained in another resource, it SHALL NOT have a security label contained.meta.security.empty()
dom-6 best practice Specimen A resource should have narrative for robust management text.`div`.exists()
ele-1 error **ALL** elements All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error **ALL** extensions Must have either extensions or value[x], not both extension.exists() != value.exists()

This structure is derived from SpecimenEu

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* SpecimenEu Campione Referto di Laboratorio
... identifier 0..* Identifier Identificativo esterno del campione (identificativo locale al LIS)
... type 1..1 CodeableConcept Tipo di campione.
Binding: Tipo Campione (preferred)
... subject 0..1 Reference(Patient - Lab Report) Soggetto da cui è stato prelevato il campione.
.... bodySite 0..1 CodeableConcept Sito anatomico di prelievo del campione.
... processing
.... additive 0..* Reference(Substance (specimen additive) - Lab Report) Additivo.
... container
.... type 0..1 CodeableConcept Tipo di dispositivo utilizzato per il contenere il campione.
Binding: Container Campione (preferred)

doco Documentation for this format

Terminology Bindings (Differential)

Path Status Usage ValueSet Version Source
Specimen.type Base preferred Tipo Campione 📦0.2.0 This IG
Specimen.container.type Base preferred Container Campione 📦0.2.0 This IG
NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* SpecimenEu Campione Referto di Laboratorio
... id Σ 0..1 id Logical id of this artifact
... meta Σ 0..1 Meta Metadata about the resource
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... text 0..1 Narrative Text summary of the resource, for human interpretation
This profile does not constrain the narrative in regard to content, language, or traceability to data elements
... contained 0..* Resource Contained, inline Resources
... extension 0..* Extension Additional content defined by implementations
... modifierExtension ?! 0..* Extension Extensions that cannot be ignored
... identifier Σ 0..* Identifier Identificativo esterno del campione (identificativo locale al LIS)
... accessionIdentifier Σ 0..1 Identifier Identifier assigned by the lab
... status ?!Σ 0..1 code available | unavailable | unsatisfactory | entered-in-error
Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
... type Σ 1..1 CodeableConcept Tipo di campione.
Binding: Tipo Campione (preferred)
... subject Σ 0..1 Reference(Patient - Lab Report) Soggetto da cui è stato prelevato il campione.
... receivedTime Σ 0..1 dateTime The time when specimen was received for processing
... parent 0..* Reference(Specimen: Laboratory) Specimen from which this specimen originated
... request 0..* Reference(ServiceRequest) Why the specimen was collected.
... collection 0..1 BackboneElement Collection details
.... id 0..1 string Unique id for inter-element referencing
.... Slices for extension 0..* Extension Extension
Slice: Unordered, Open by value:url
..... extension:bodySite 0..1 (Complex) Target anatomic location or structure
URL: http://hl7.org/fhir/StructureDefinition/bodySite
...... id 0..1 string Unique id for inter-element referencing
...... extension 0..0 Extension
Slice: Unordered, Open by value:url
...... url 1..1 uri "http://hl7.org/fhir/StructureDefinition/bodySite"
...... value[x] 1..1 Reference(Body structure: Laboratory) Value of extension
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... collector Σ 0..1 Reference(Practitioner | PractitionerRole) Who collected the specimen
.... collected[x] Σ 0..1 Collection time
..... collectedDateTime dateTime
..... collectedPeriod Period
.... duration Σ 0..1 Duration How long it took to collect specimen
.... quantity 0..1 SimpleQuantity The quantity of specimen collected
.... method 0..1 CodeableConcept Technique used to perform collection
Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure.
.... bodySite 0..1 CodeableConcept Sito anatomico di prelievo del campione.
Binding: SNOMEDCTBodyStructures (preferred)
.... fastingStatus[x] Σ 0..1 Whether or how long patient abstained from food and/or drink
Binding: hl7VS-relevantClincialInformation (extensible): Codes describing the fasting status of the patient.
..... fastingStatusCodeableConcept CodeableConcept
..... fastingStatusDuration Duration
... processing 0..* BackboneElement Processing and processing step details
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... description 0..1 string Textual description of procedure
.... procedure 0..1 CodeableConcept Indicates the treatment step applied to the specimen
Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen.
.... additive 0..* Reference(Substance (specimen additive) - Lab Report) Additivo.
.... time[x] 0..1 Date and time of specimen processing
..... timeDateTime dateTime
..... timePeriod Period
... container 0..* BackboneElement Direct container of specimen (tube/slide, etc.)
.... id 0..1 string Unique id for inter-element referencing
.... Slices for extension 0..* Extension Extension
Slice: Unordered, Open by value:url
..... extension:device 0..1 Reference(Device) Optional Extensions Element
URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... identifier Σ 0..* Identifier Id for the container
.... description 0..1 string Textual description of the container
.... type 0..1 CodeableConcept Tipo di dispositivo utilizzato per il contenere il campione.
Binding: Container Campione (preferred)
.... capacity 0..1 SimpleQuantity Container volume or size
.... specimenQuantity 0..1 SimpleQuantity Quantity of specimen within container
... condition Σ 0..* CodeableConcept State of the specimen
Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen.
... note 0..* Annotation Comments

doco Documentation for this format

Terminology Bindings

Path Status Usage ValueSet Version Source
Specimen.language Base preferred Common Languages 📦4.0.1 FHIR Std.
Specimen.status Base required SpecimenStatus 📍4.0.1 FHIR Std.
Specimen.type Base preferred Tipo Campione 📦0.2.0 This IG
Specimen.collection.​method Base example FHIR Specimen Collection Method 📦4.0.1 FHIR Std.
Specimen.collection.​bodySite Base preferred SNOMED CT Body Structures 📦4.0.1 FHIR Std.
Specimen.collection.​fastingStatus[x] Base extensible hl7VS-relevantClincialInformation 📦2.0.0 THO v7.0
Specimen.processing.​procedure Base example Specimen processing procedure 📦4.0.1 FHIR Std.
Specimen.container.type Base preferred Container Campione 📦0.2.0 This IG
Specimen.condition Base extensible hl7VS-specimenCondition 📦2.0.0 THO v7.0

Constraints

Id Grade Path(s) Description Expression
dom-2 error Specimen If the resource is contained in another resource, it SHALL NOT contain nested Resources contained.contained.empty()
dom-3 error Specimen If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4 error Specimen If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5 error Specimen If a resource is contained in another resource, it SHALL NOT have a security label contained.meta.security.empty()
dom-6 best practice Specimen A resource should have narrative for robust management text.`div`.exists()
ele-1 error **ALL** elements All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error **ALL** extensions Must have either extensions or value[x], not both extension.exists() != value.exists()

Key Elements View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* SpecimenEu Campione Referto di Laboratorio
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... modifierExtension ?! 0..* Extension Extensions that cannot be ignored
... identifier Σ 0..* Identifier Identificativo esterno del campione (identificativo locale al LIS)
... type Σ 1..1 CodeableConcept Tipo di campione.
Binding: Tipo Campione (preferred)
... subject Σ 0..1 Reference(Patient - Lab Report) Soggetto da cui è stato prelevato il campione.

doco Documentation for this format

Terminology Bindings

Path Status Usage ValueSet Version Source
Specimen.status Base required SpecimenStatus 📍4.0.1 FHIR Std.
Specimen.type Base preferred Tipo Campione 📦0.2.0 This IG

Constraints

Id Grade Path(s) Description Expression
dom-2 error Specimen If the resource is contained in another resource, it SHALL NOT contain nested Resources contained.contained.empty()
dom-3 error Specimen If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4 error Specimen If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5 error Specimen If a resource is contained in another resource, it SHALL NOT have a security label contained.meta.security.empty()
dom-6 best practice Specimen A resource should have narrative for robust management text.`div`.exists()
ele-1 error **ALL** elements All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error **ALL** extensions Must have either extensions or value[x], not both extension.exists() != value.exists()

Differential View

This structure is derived from SpecimenEu

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* SpecimenEu Campione Referto di Laboratorio
... identifier 0..* Identifier Identificativo esterno del campione (identificativo locale al LIS)
... type 1..1 CodeableConcept Tipo di campione.
Binding: Tipo Campione (preferred)
... subject 0..1 Reference(Patient - Lab Report) Soggetto da cui è stato prelevato il campione.
.... bodySite 0..1 CodeableConcept Sito anatomico di prelievo del campione.
... processing
.... additive 0..* Reference(Substance (specimen additive) - Lab Report) Additivo.
... container
.... type 0..1 CodeableConcept Tipo di dispositivo utilizzato per il contenere il campione.
Binding: Container Campione (preferred)

doco Documentation for this format

Terminology Bindings (Differential)

Path Status Usage ValueSet Version Source
Specimen.type Base preferred Tipo Campione 📦0.2.0 This IG
Specimen.container.type Base preferred Container Campione 📦0.2.0 This IG

Snapshot View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* SpecimenEu Campione Referto di Laboratorio
... id Σ 0..1 id Logical id of this artifact
... meta Σ 0..1 Meta Metadata about the resource
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... text 0..1 Narrative Text summary of the resource, for human interpretation
This profile does not constrain the narrative in regard to content, language, or traceability to data elements
... contained 0..* Resource Contained, inline Resources
... extension 0..* Extension Additional content defined by implementations
... modifierExtension ?! 0..* Extension Extensions that cannot be ignored
... identifier Σ 0..* Identifier Identificativo esterno del campione (identificativo locale al LIS)
... accessionIdentifier Σ 0..1 Identifier Identifier assigned by the lab
... status ?!Σ 0..1 code available | unavailable | unsatisfactory | entered-in-error
Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
... type Σ 1..1 CodeableConcept Tipo di campione.
Binding: Tipo Campione (preferred)
... subject Σ 0..1 Reference(Patient - Lab Report) Soggetto da cui è stato prelevato il campione.
... receivedTime Σ 0..1 dateTime The time when specimen was received for processing
... parent 0..* Reference(Specimen: Laboratory) Specimen from which this specimen originated
... request 0..* Reference(ServiceRequest) Why the specimen was collected.
... collection 0..1 BackboneElement Collection details
.... id 0..1 string Unique id for inter-element referencing
.... Slices for extension 0..* Extension Extension
Slice: Unordered, Open by value:url
..... extension:bodySite 0..1 (Complex) Target anatomic location or structure
URL: http://hl7.org/fhir/StructureDefinition/bodySite
...... id 0..1 string Unique id for inter-element referencing
...... extension 0..0 Extension
Slice: Unordered, Open by value:url
...... url 1..1 uri "http://hl7.org/fhir/StructureDefinition/bodySite"
...... value[x] 1..1 Reference(Body structure: Laboratory) Value of extension
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... collector Σ 0..1 Reference(Practitioner | PractitionerRole) Who collected the specimen
.... collected[x] Σ 0..1 Collection time
..... collectedDateTime dateTime
..... collectedPeriod Period
.... duration Σ 0..1 Duration How long it took to collect specimen
.... quantity 0..1 SimpleQuantity The quantity of specimen collected
.... method 0..1 CodeableConcept Technique used to perform collection
Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure.
.... bodySite 0..1 CodeableConcept Sito anatomico di prelievo del campione.
Binding: SNOMEDCTBodyStructures (preferred)
.... fastingStatus[x] Σ 0..1 Whether or how long patient abstained from food and/or drink
Binding: hl7VS-relevantClincialInformation (extensible): Codes describing the fasting status of the patient.
..... fastingStatusCodeableConcept CodeableConcept
..... fastingStatusDuration Duration
... processing 0..* BackboneElement Processing and processing step details
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... description 0..1 string Textual description of procedure
.... procedure 0..1 CodeableConcept Indicates the treatment step applied to the specimen
Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen.
.... additive 0..* Reference(Substance (specimen additive) - Lab Report) Additivo.
.... time[x] 0..1 Date and time of specimen processing
..... timeDateTime dateTime
..... timePeriod Period
... container 0..* BackboneElement Direct container of specimen (tube/slide, etc.)
.... id 0..1 string Unique id for inter-element referencing
.... Slices for extension 0..* Extension Extension
Slice: Unordered, Open by value:url
..... extension:device 0..1 Reference(Device) Optional Extensions Element
URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.container.device
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
.... identifier Σ 0..* Identifier Id for the container
.... description 0..1 string Textual description of the container
.... type 0..1 CodeableConcept Tipo di dispositivo utilizzato per il contenere il campione.
Binding: Container Campione (preferred)
.... capacity 0..1 SimpleQuantity Container volume or size
.... specimenQuantity 0..1 SimpleQuantity Quantity of specimen within container
... condition Σ 0..* CodeableConcept State of the specimen
Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen.
... note 0..* Annotation Comments

doco Documentation for this format

Terminology Bindings

Path Status Usage ValueSet Version Source
Specimen.language Base preferred Common Languages 📦4.0.1 FHIR Std.
Specimen.status Base required SpecimenStatus 📍4.0.1 FHIR Std.
Specimen.type Base preferred Tipo Campione 📦0.2.0 This IG
Specimen.collection.​method Base example FHIR Specimen Collection Method 📦4.0.1 FHIR Std.
Specimen.collection.​bodySite Base preferred SNOMED CT Body Structures 📦4.0.1 FHIR Std.
Specimen.collection.​fastingStatus[x] Base extensible hl7VS-relevantClincialInformation 📦2.0.0 THO v7.0
Specimen.processing.​procedure Base example Specimen processing procedure 📦4.0.1 FHIR Std.
Specimen.container.type Base preferred Container Campione 📦0.2.0 This IG
Specimen.condition Base extensible hl7VS-specimenCondition 📦2.0.0 THO v7.0

Constraints

Id Grade Path(s) Description Expression
dom-2 error Specimen If the resource is contained in another resource, it SHALL NOT contain nested Resources contained.contained.empty()
dom-3 error Specimen If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4 error Specimen If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5 error Specimen If a resource is contained in another resource, it SHALL NOT have a security label contained.meta.security.empty()
dom-6 best practice Specimen A resource should have narrative for robust management text.`div`.exists()
ele-1 error **ALL** elements All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error **ALL** extensions Must have either extensions or value[x], not both extension.exists() != value.exists()

 

Other representations of profile: CSV, Excel, Schematron