OneAquaHealth Project
0.1.0-ci-build - ci-build
150
OneAquaHealth Project
0.1.0-ci-build - ci-build
150
OneAquaHealth Project, published by OneAquaHealth Project. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/oah/ and changes regularly. See the Directory of published versions
| Draft as of 2025-08-11 |
{
"resourceType" : "CodeSystem",
"id" : "temporarySystem-oah-eu",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem temporarySystem-oah-eu</b></p><a name=\"temporarySystem-oah-eu\"> </a><a name=\"hctemporarySystem-oah-eu\"> </a><p>This case-sensitive code system <code>http://hl7.eu/fhir/ig/oah/CodeSystem/temporarySystem-oah-eu</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">macroinvertebreates<a name=\"temporarySystem-oah-eu-macroinvertebreates\"> </a></td><td>Benthic Macro invertebrates count</td><td>Benthic Macroinvertebrates count</td></tr><tr><td style=\"white-space:nowrap\">diatomes<a name=\"temporarySystem-oah-eu-diatomes\"> </a></td><td>Diatoms (microalgae/phytobenthos)</td><td>Diatoms (microalgae/phytobenthos)</td></tr><tr><td style=\"white-space:nowrap\">fishes<a name=\"temporarySystem-oah-eu-fishes\"> </a></td><td>Fish</td><td>Fish</td></tr><tr><td style=\"white-space:nowrap\">macrophytes<a name=\"temporarySystem-oah-eu-macrophytes\"> </a></td><td>Macrophytes (aquatic plants)</td><td>Macrophytes (aquatic plants)</td></tr><tr><td style=\"white-space:nowrap\">liveworts<a name=\"temporarySystem-oah-eu-liveworts\"> </a></td><td>Liveworts/mosses/lichens</td><td>Liveworts/mosses/lichens</td></tr><tr><td style=\"white-space:nowrap\">broad-leaved-herbs<a name=\"temporarySystem-oah-eu-broad-leaved-herbs\"> </a></td><td>Emergent broad-leaved herbs</td><td>Emergent broad-leaved herbs</td></tr><tr><td style=\"white-space:nowrap\">floating-leaved<a name=\"temporarySystem-oah-eu-floating-leaved\"> </a></td><td>Floating-leaved (rooted)</td><td>Floating-leaved (rooted)</td></tr><tr><td style=\"white-space:nowrap\">free-floating<a name=\"temporarySystem-oah-eu-free-floating\"> </a></td><td>Free-floating</td><td>Free-floating</td></tr><tr><td style=\"white-space:nowrap\">amphibious<a name=\"temporarySystem-oah-eu-amphibious\"> </a></td><td>Amphibious (occupy the transition between land and water)</td><td>Amphibious (occupy the transition between land and water)</td></tr><tr><td style=\"white-space:nowrap\">submerged-broad-leaved<a name=\"temporarySystem-oah-eu-submerged-broad-leaved\"> </a></td><td>Submerged broad-leaved</td><td>Submerged broad-leaved</td></tr><tr><td style=\"white-space:nowrap\">submerged-linear-leaved<a name=\"temporarySystem-oah-eu-submerged-linear-leaved\"> </a></td><td>Submerged linear-leaved</td><td>Submerged linear-leaved</td></tr><tr><td style=\"white-space:nowrap\">filamentous-algae<a name=\"temporarySystem-oah-eu-filamentous-algae\"> </a></td><td>Filamentous algae</td><td>Filamentous algae</td></tr><tr><td style=\"white-space:nowrap\">liveworts-non-native<a name=\"temporarySystem-oah-eu-liveworts-non-native\"> </a></td><td>Liveworts/mosses/lichens Non native</td><td>Liveworts/mosses/lichens non native</td></tr><tr><td style=\"white-space:nowrap\">broad-leaved-herbs-non-native<a name=\"temporarySystem-oah-eu-broad-leaved-herbs-non-native\"> </a></td><td>Emergent broad-leaved herbs non native</td><td>Emergent broad-leaved herbs non native</td></tr><tr><td style=\"white-space:nowrap\">floating-leaved-non-native<a name=\"temporarySystem-oah-eu-floating-leaved-non-native\"> </a></td><td>Floating-leaved (rooted) Non native</td><td>Floating-leaved (rooted) non native</td></tr><tr><td style=\"white-space:nowrap\">free-floating-non-native<a name=\"temporarySystem-oah-eu-free-floating-non-native\"> </a></td><td>Free-floating Non native</td><td>Free-floating non native</td></tr><tr><td style=\"white-space:nowrap\">amphibious-non-native<a name=\"temporarySystem-oah-eu-amphibious-non-native\"> </a></td><td>Amphibious (occupy the transition between land and water) Non native</td><td>Amphibious (occupy the transition between land and water) non native</td></tr><tr><td style=\"white-space:nowrap\">submerged-broad-leaved-non-native<a name=\"temporarySystem-oah-eu-submerged-broad-leaved-non-native\"> </a></td><td>Submerged broad-leaved Non native</td><td>Submerged broad-leaved non native</td></tr><tr><td style=\"white-space:nowrap\">submerged-linear-leaved-non-native<a name=\"temporarySystem-oah-eu-submerged-linear-leaved-non-native\"> </a></td><td>Submerged linear-leaved Non native</td><td>Submerged linear-leaved non native</td></tr><tr><td style=\"white-space:nowrap\">filamentous-algae-non-native<a name=\"temporarySystem-oah-eu-filamentous-algae-non-native\"> </a></td><td>Filamentous algae Non native</td><td>Filamentous algae</td></tr><tr><td style=\"white-space:nowrap\">riparianVegetation<a name=\"temporarySystem-oah-eu-riparianVegetation\"> </a></td><td>Riparian vegetation</td><td>Riparian vegetation</td></tr><tr><td style=\"white-space:nowrap\">trees<a name=\"temporarySystem-oah-eu-trees\"> </a></td><td>Trees (height >3m)</td><td>Trees (height >3m)</td></tr><tr><td style=\"white-space:nowrap\">bushes<a name=\"temporarySystem-oah-eu-bushes\"> </a></td><td>Bushes (height (1.5-3m)</td><td>Bushes (height (1.5-3m)</td></tr><tr><td style=\"white-space:nowrap\">herbaceous<a name=\"temporarySystem-oah-eu-herbaceous\"> </a></td><td>Herbaceous (height < 1.5m)</td><td>Herbaceous (height < 1.5m)</td></tr><tr><td style=\"white-space:nowrap\">microbiomes<a name=\"temporarySystem-oah-eu-microbiomes\"> </a></td><td>Microbiomes/Biofilms</td><td>Microbiomes/Biofilms</td></tr><tr><td style=\"white-space:nowrap\">morophology<a name=\"temporarySystem-oah-eu-morophology\"> </a></td><td>Morphology of the streams</td><td>Morphology of the streams – habitat, shape of the channel and valley, substrate in the channel and margins</td></tr><tr><td style=\"white-space:nowrap\">hydrology<a name=\"temporarySystem-oah-eu-hydrology\"> </a></td><td>Hydrology of the stream</td><td>Hydrology of the stream – flow type, diversity of flow types, longitudinal connectivity, runoff</td></tr><tr><td style=\"white-space:nowrap\">LandUse<a name=\"temporarySystem-oah-eu-LandUse\"> </a></td><td>Land use in the margins</td><td>Land use in the margins</td></tr><tr><td style=\"white-space:nowrap\">nutrients<a name=\"temporarySystem-oah-eu-nutrients\"> </a></td><td>Nutrients</td><td>Nutrients (Nitrates, nitrites, ammonia, phosphates, total P, total N, …)</td></tr><tr><td style=\"white-space:nowrap\">pH<a name=\"temporarySystem-oah-eu-pH\"> </a></td><td>pH</td><td>pH</td></tr><tr><td style=\"white-space:nowrap\">dissolvedO2<a name=\"temporarySystem-oah-eu-dissolvedO2\"> </a></td><td>Dissolved O2</td><td>Dissolved O2</td></tr><tr><td style=\"white-space:nowrap\">waterTemperature<a name=\"temporarySystem-oah-eu-waterTemperature\"> </a></td><td>Water temperature</td><td>Water temperature</td></tr><tr><td style=\"white-space:nowrap\">tds<a name=\"temporarySystem-oah-eu-tds\"> </a></td><td>Total dissolved solids (TDS)</td><td>Total dissolved solids (TDS)</td></tr><tr><td style=\"white-space:nowrap\">tss<a name=\"temporarySystem-oah-eu-tss\"> </a></td><td>Total suspended solids (TSS)</td><td>Total suspended solids (TSS)</td></tr><tr><td style=\"white-space:nowrap\">conductivity<a name=\"temporarySystem-oah-eu-conductivity\"> </a></td><td>Conductivity</td><td>Conductivity</td></tr><tr><td style=\"white-space:nowrap\">pharmaceuticals<a name=\"temporarySystem-oah-eu-pharmaceuticals\"> </a></td><td>Pharmaceuticals</td><td>Pharmaceuticals</td></tr><tr><td style=\"white-space:nowrap\">foam<a name=\"temporarySystem-oah-eu-foam\"> </a></td><td>Foam/colour/smell</td><td>Foam/colour/smell</td></tr><tr><td style=\"white-space:nowrap\">coliforms<a name=\"temporarySystem-oah-eu-coliforms\"> </a></td><td>Coliforms</td><td>Coliforms</td></tr><tr><td style=\"white-space:nowrap\">diptera<a name=\"temporarySystem-oah-eu-diptera\"> </a></td><td>Diptera</td><td>Diptera (specially Culicidae and Psycodidae)</td></tr><tr><td style=\"white-space:nowrap\">ticks<a name=\"temporarySystem-oah-eu-ticks\"> </a></td><td>Ticks</td><td>Ticks</td></tr><tr><td style=\"white-space:nowrap\">invasiveOrganisms<a name=\"temporarySystem-oah-eu-invasiveOrganisms\"> </a></td><td>Invasive invertebrate, plants and fish</td><td>Invasive invertebrate, plants and fish</td></tr><tr><td style=\"white-space:nowrap\">birds<a name=\"temporarySystem-oah-eu-birds\"> </a></td><td>Birds</td><td>Birds</td></tr><tr><td style=\"white-space:nowrap\">diatomTratology<a name=\"temporarySystem-oah-eu-diatomTratology\"> </a></td><td>Diatom teratology</td><td>Diatom teratology (deformities)</td></tr><tr><td style=\"white-space:nowrap\">fish<a name=\"temporarySystem-oah-eu-fish\"> </a></td><td>Fish</td><td>Fish</td></tr><tr><td style=\"white-space:nowrap\">amphibians<a name=\"temporarySystem-oah-eu-amphibians\"> </a></td><td>Amphibians</td><td>Amphibians</td></tr><tr><td style=\"white-space:nowrap\">ndci<a name=\"temporarySystem-oah-eu-ndci\"> </a></td><td>Normalized Difference Chlorophyll Index (NDCI)</td><td/></tr><tr><td style=\"white-space:nowrap\">mci<a name=\"temporarySystem-oah-eu-mci\"> </a></td><td>Maximum Chlorophyll Index (MCI)</td><td/></tr><tr><td style=\"white-space:nowrap\">bwdrvi<a name=\"temporarySystem-oah-eu-bwdrvi\"> </a></td><td>Blue Wide Dynamic Range Vegetation Index (BWDRVI)</td><td/></tr><tr><td style=\"white-space:nowrap\">evi<a name=\"temporarySystem-oah-eu-evi\"> </a></td><td>Enhanced Vegetation Index (EVI)</td><td/></tr><tr><td style=\"white-space:nowrap\">ndvi<a name=\"temporarySystem-oah-eu-ndvi\"> </a></td><td>Normalized Difference Vegetation Index (NDVI)</td><td/></tr><tr><td style=\"white-space:nowrap\">ndwi<a name=\"temporarySystem-oah-eu-ndwi\"> </a></td><td>Normalized Difference Water Index (NDWI)</td><td/></tr><tr><td style=\"white-space:nowrap\">absent<a name=\"temporarySystem-oah-eu-absent\"> </a></td><td>Absent</td><td>Absent</td></tr><tr><td style=\"white-space:nowrap\">present<a name=\"temporarySystem-oah-eu-present\"> </a></td><td>Present</td><td>Present</td></tr><tr><td style=\"white-space:nowrap\">extensive<a name=\"temporarySystem-oah-eu-extensive\"> </a></td><td>Extensive</td><td>Extensive</td></tr><tr><td style=\"white-space:nowrap\">several-non-native-species<a name=\"temporarySystem-oah-eu-several-non-native-species\"> </a></td><td>Several non-native species</td><td>Several non-native species</td></tr><tr><td style=\"white-space:nowrap\">non-native-species<a name=\"temporarySystem-oah-eu-non-native-species\"> </a></td><td>Non-native species</td><td>Non-native species</td></tr><tr><td style=\"white-space:nowrap\">unknown-non-native-species<a name=\"temporarySystem-oah-eu-unknown-non-native-species\"> </a></td><td>Unknown non-native species</td><td>Unknown non-native species</td></tr><tr><td style=\"white-space:nowrap\">0-20-percent<a name=\"temporarySystem-oah-eu-0-20-percent\"> </a></td><td>0-20%</td><td>0-20%</td></tr><tr><td style=\"white-space:nowrap\">21-40-percent<a name=\"temporarySystem-oah-eu-21-40-percent\"> </a></td><td>21-40%</td><td>21-40%</td></tr><tr><td style=\"white-space:nowrap\">41-60-percent<a name=\"temporarySystem-oah-eu-41-60-percent\"> </a></td><td>41-60%</td><td>41-60%</td></tr><tr><td style=\"white-space:nowrap\">61-80-percent<a name=\"temporarySystem-oah-eu-61-80-percent\"> </a></td><td>61-80%</td><td>61-80%</td></tr><tr><td style=\"white-space:nowrap\">81-100-percent<a name=\"temporarySystem-oah-eu-81-100-percent\"> </a></td><td>81-100%</td><td>81-100%</td></tr></table></div>"
},
"url" : "http://hl7.eu/fhir/ig/oah/CodeSystem/temporarySystem-oah-eu",
"version" : "0.1.0-ci-build",
"name" : "TemporaryOahSystem",
"title" : "Temporary OAH Code System",
"status" : "draft",
"experimental" : true,
"date" : "2025-08-11T08:52:23+00:00",
"publisher" : "OneAquaHealth Project",
"contact" : [
{
"name" : "OneAquaHealth Project",
"telecom" : [
{
"system" : "url",
"value" : "https://www.oneaquahealth.eu"
}
]
}
],
"description" : "This is a temporary code system defined to collect concepts expected to be used by this project, but for which international coded concepts have not been identified yet.",
"jurisdiction" : [
{
"coding" : [
{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "150",
"display" : "Europe"
}
]
}
],
"caseSensitive" : true,
"content" : "complete",
"count" : 62,
"concept" : [
{
"code" : "macroinvertebreates",
"display" : "Benthic Macro invertebrates count",
"definition" : "Benthic Macroinvertebrates count"
},
{
"code" : "diatomes",
"display" : "Diatoms (microalgae/phytobenthos)",
"definition" : "Diatoms (microalgae/phytobenthos)"
},
{
"code" : "fishes",
"display" : "Fish",
"definition" : "Fish"
},
{
"code" : "macrophytes",
"display" : "Macrophytes (aquatic plants)",
"definition" : "Macrophytes (aquatic plants)"
},
{
"code" : "liveworts",
"display" : "Liveworts/mosses/lichens",
"definition" : "Liveworts/mosses/lichens"
},
{
"code" : "broad-leaved-herbs",
"display" : "Emergent broad-leaved herbs",
"definition" : "Emergent broad-leaved herbs"
},
{
"code" : "floating-leaved",
"display" : "Floating-leaved (rooted)",
"definition" : "Floating-leaved (rooted)"
},
{
"code" : "free-floating",
"display" : "Free-floating",
"definition" : "Free-floating"
},
{
"code" : "amphibious",
"display" : "Amphibious (occupy the transition between land and water)",
"definition" : "Amphibious (occupy the transition between land and water)"
},
{
"code" : "submerged-broad-leaved",
"display" : "Submerged broad-leaved",
"definition" : "Submerged broad-leaved"
},
{
"code" : "submerged-linear-leaved",
"display" : "Submerged linear-leaved",
"definition" : "Submerged linear-leaved"
},
{
"code" : "filamentous-algae",
"display" : "Filamentous algae",
"definition" : "Filamentous algae"
},
{
"code" : "liveworts-non-native",
"display" : "Liveworts/mosses/lichens Non native",
"definition" : "Liveworts/mosses/lichens non native"
},
{
"code" : "broad-leaved-herbs-non-native",
"display" : "Emergent broad-leaved herbs non native",
"definition" : "Emergent broad-leaved herbs non native"
},
{
"code" : "floating-leaved-non-native",
"display" : "Floating-leaved (rooted) Non native",
"definition" : "Floating-leaved (rooted) non native"
},
{
"code" : "free-floating-non-native",
"display" : "Free-floating Non native",
"definition" : "Free-floating non native"
},
{
"code" : "amphibious-non-native",
"display" : "Amphibious (occupy the transition between land and water) Non native",
"definition" : "Amphibious (occupy the transition between land and water) non native"
},
{
"code" : "submerged-broad-leaved-non-native",
"display" : "Submerged broad-leaved Non native",
"definition" : "Submerged broad-leaved non native"
},
{
"code" : "submerged-linear-leaved-non-native",
"display" : "Submerged linear-leaved Non native",
"definition" : "Submerged linear-leaved non native"
},
{
"code" : "filamentous-algae-non-native",
"display" : "Filamentous algae Non native",
"definition" : "Filamentous algae"
},
{
"code" : "riparianVegetation",
"display" : "Riparian vegetation",
"definition" : "Riparian vegetation"
},
{
"code" : "trees",
"display" : "Trees (height >3m)",
"definition" : "Trees (height >3m)"
},
{
"code" : "bushes",
"display" : "Bushes (height (1.5-3m)",
"definition" : "Bushes (height (1.5-3m)"
},
{
"code" : "herbaceous",
"display" : "Herbaceous (height < 1.5m)",
"definition" : "Herbaceous (height < 1.5m)"
},
{
"code" : "microbiomes",
"display" : "Microbiomes/Biofilms",
"definition" : "Microbiomes/Biofilms"
},
{
"code" : "morophology",
"display" : "Morphology of the streams",
"definition" : "Morphology of the streams – habitat, shape of the channel and valley, substrate in the channel and margins"
},
{
"code" : "hydrology",
"display" : "Hydrology of the stream",
"definition" : "Hydrology of the stream – flow type, diversity of flow types, longitudinal connectivity, runoff"
},
{
"code" : "LandUse",
"display" : "Land use in the margins",
"definition" : "Land use in the margins"
},
{
"code" : "nutrients",
"display" : "Nutrients",
"definition" : "Nutrients (Nitrates, nitrites, ammonia, phosphates, total P, total N, …)"
},
{
"code" : "pH",
"display" : "pH",
"definition" : "pH"
},
{
"code" : "dissolvedO2",
"display" : "Dissolved O2",
"definition" : "Dissolved O2"
},
{
"code" : "waterTemperature",
"display" : "Water temperature",
"definition" : "Water temperature"
},
{
"code" : "tds",
"display" : "Total dissolved solids (TDS)",
"definition" : "Total dissolved solids (TDS)"
},
{
"code" : "tss",
"display" : "Total suspended solids (TSS)",
"definition" : "Total suspended solids (TSS)"
},
{
"code" : "conductivity",
"display" : "Conductivity",
"definition" : "Conductivity"
},
{
"code" : "pharmaceuticals",
"display" : "Pharmaceuticals",
"definition" : "Pharmaceuticals"
},
{
"code" : "foam",
"display" : "Foam/colour/smell",
"definition" : "Foam/colour/smell"
},
{
"code" : "coliforms",
"display" : "Coliforms",
"definition" : "Coliforms"
},
{
"code" : "diptera",
"display" : "Diptera",
"definition" : "Diptera (specially Culicidae and Psycodidae)"
},
{
"code" : "ticks",
"display" : "Ticks",
"definition" : "Ticks"
},
{
"code" : "invasiveOrganisms",
"display" : "Invasive invertebrate, plants and fish",
"definition" : "Invasive invertebrate, plants and fish"
},
{
"code" : "birds",
"display" : "Birds",
"definition" : "Birds"
},
{
"code" : "diatomTratology",
"display" : "Diatom teratology",
"definition" : "Diatom teratology (deformities)"
},
{
"code" : "fish",
"display" : "Fish",
"definition" : "Fish"
},
{
"code" : "amphibians",
"display" : "Amphibians",
"definition" : "Amphibians"
},
{
"code" : "ndci",
"display" : "Normalized Difference Chlorophyll Index (NDCI)"
},
{
"code" : "mci",
"display" : "Maximum Chlorophyll Index (MCI)"
},
{
"code" : "bwdrvi",
"display" : "Blue Wide Dynamic Range Vegetation Index (BWDRVI)"
},
{
"code" : "evi",
"display" : "Enhanced Vegetation Index (EVI)"
},
{
"code" : "ndvi",
"display" : "Normalized Difference Vegetation Index (NDVI)"
},
{
"code" : "ndwi",
"display" : "Normalized Difference Water Index (NDWI)"
},
{
"code" : "absent",
"display" : "Absent",
"definition" : "Absent"
},
{
"code" : "present",
"display" : "Present",
"definition" : "Present"
},
{
"code" : "extensive",
"display" : "Extensive",
"definition" : "Extensive"
},
{
"code" : "several-non-native-species",
"display" : "Several non-native species",
"definition" : "Several non-native species"
},
{
"code" : "non-native-species",
"display" : "Non-native species",
"definition" : "Non-native species"
},
{
"code" : "unknown-non-native-species",
"display" : "Unknown non-native species",
"definition" : "Unknown non-native species"
},
{
"code" : "0-20-percent",
"display" : "0-20%",
"definition" : "0-20%"
},
{
"code" : "21-40-percent",
"display" : "21-40%",
"definition" : "21-40%"
},
{
"code" : "41-60-percent",
"display" : "41-60%",
"definition" : "41-60%"
},
{
"code" : "61-80-percent",
"display" : "61-80%",
"definition" : "61-80%"
},
{
"code" : "81-100-percent",
"display" : "81-100%",
"definition" : "81-100%"
}
]
}
IG © 2023+ OneAquaHealth Project. Package hl7.eu.fhir.oah#0.1.0-ci-build based on FHIR 4.0.1. Generated 2025-08-11
