HL7.EU.FHIR.FLUTE\Procedure: biopsy

FLUTE Cross-border Prostate Cancer Data Standard Guide
0.1.0 - ci-build
Funded by the European Union

FLUTE Cross-border Prostate Cancer Data Standard Guide, published by Flute Project. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/flute/ and changes regularly. See the Directory of published versions

Resource Profile: Procedure: biopsy

Official URL: http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-Biopsy				Version: 0.1.0
Draft as of 2024-09-25				Computable Name: PR_Biopsy

This profile represents the biopsy procedure performed on a patient.

Usage:

Refer to this Resource Profile: DocumentReference: link with variables and ImagingStudy: link with variables

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

Differential Table
Key Elements Table
Snapshot Table
Statistics/References
All

This structure is derived from Procedure

Name	Card.	Type	Description & Constraints
Procedure	0..*	Procedure	An action that is being or was performed on a patient
category	1..1	CodeableConcept	Classification of the procedure Binding: Type of Biopsy (required)
coding	1..*	Coding	Code defined by a terminology system
code	0..1	CodeableConcept	Identification of the procedure Required Pattern: At least the following
coding	1..*	Coding	Code defined by a terminology system Fixed Value: (complex)
system	1..1	uri	Identity of the terminology system Fixed Value: http://snomed.info/sct
code	1..1	code	Symbol in syntax defined by the system Fixed Value: 86273004
display	1..1	string	Representation defined by the system Fixed Value: Biopsy
subject	1..1	Reference(Patient)	Who the procedure was performed on
Slices for performed[x]	1..1	Age	When the procedure was performed Slice: Unordered, Open by type:$this
performed[x]:performedAge	1..1	Age	When the procedure was performed
bodySite
coding	0..*	Coding	Code defined by a terminology system Required Pattern: At least the following
system	1..1	uri	Identity of the terminology system Fixed Value: http://snomed.info/sct
code	1..1	code	Symbol in syntax defined by the system Fixed Value: 41216001
display	1..1	string	Representation defined by the system Fixed Value: Prostatic structure (body structure)
Documentation for this format

Terminology Bindings (Differential)

Path	Conformance	ValueSet	URI
Procedure.category	required	VS_BiopsyType `http://hl7.eu/fhir/ig/flute/ValueSet/VS-BiopsyType` from this IG

Name	Flags	Card.	Type	Description & Constraints
Procedure		0..*	Procedure	An action that is being or was performed on a patient
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored
status	?!Σ	1..1	code	preparation \| in-progress \| not-done \| on-hold \| stopped \| completed \| entered-in-error \| unknown Binding: EventStatus (required): A code specifying the state of the procedure.
category	Σ	1..1	CodeableConcept	Classification of the procedure Binding: Type of Biopsy (required)
coding	Σ	1..*	Coding	Code defined by a terminology system
code	Σ	0..1	CodeableConcept	Identification of the procedure Binding: ProcedureCodes(SNOMEDCT) (example): A code to identify a specific procedure . Required Pattern: At least the following
coding		1..*	Coding	Code defined by a terminology system Fixed Value: (complex)
system		1..1	uri	Identity of the terminology system Fixed Value: http://snomed.info/sct
code		1..1	code	Symbol in syntax defined by the system Fixed Value: 86273004
display		1..1	string	Representation defined by the system Fixed Value: Biopsy
subject	Σ	1..1	Reference(Patient)	Who the procedure was performed on
Slices for performed[x]	Σ	1..1	Age	When the procedure was performed Slice: Unordered, Closed by type:$this
performed[x]:performedAge	Σ	1..1	Age	When the procedure was performed
Documentation for this format

Terminology Bindings

Path	Conformance	ValueSet / Code	URI
Procedure.status	required	EventStatus `http://hl7.org/fhir/ValueSet/event-status\|4.0.1` from the FHIR Standard
Procedure.category	required	VS_BiopsyType `http://hl7.eu/fhir/ig/flute/ValueSet/VS-BiopsyType` from this IG
Procedure.code	example	Pattern: SNOMED-CT Code 86273004("Biopsy") `http://hl7.org/fhir/ValueSet/procedure-code` from the FHIR Standard

Constraints

Id	Grade	Path(s)	Details	Requirements
dom-2	error	Procedure	If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty()
dom-3	error	Procedure	If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference \| %resource.descendants().as(canonical) \| %resource.descendants().as(uri) \| %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4	error	Procedure	If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5	error	Procedure	If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty()
dom-6	best practice	Procedure	A resource should have narrative for robust management : text.`div`.exists()
ele-1	error	ALL elements	All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count())
ext-1	error	ALL extensions	Must have either extensions or value[x], not both : extension.exists() != value.exists()