Repositorio de Reportes de Biopsias Oncológicas, published by Unidad de Interoperabilidad - MINSAL. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/Minsal-CL/riap/ and changes regularly. See the Directory of published versions

• Content
• Detailed Descriptions
• Mappings
• Examples
• XML
• JSON
• TTL

Resource Profile: Perfil de Muestra ( Experimental )

Muestra de tejido o fluido biológico para análisis de antomía patologica.

Usages:

• Use this Profile: Perfil de Bundle para Generar Informe
• Refer to this Profile: Perfil de Origen para las Categorías T, N, M (Abstracto), Documento de Biopsía, Perfil del Reporte de Anatomía Patológica, Perfil de Origen de Todos Los Resultados and Perfil de Solicitud de Informe de Anatomía Patológica
• Examples for this Profile: Specimen/r2bo-specimen-example
• CapabilityStatements using this Profile: CapabilityStatement Cliente de Origen de Informes del Repositorio de Biopsia del Ministerio de Salud, CapabilityStatement del Cliente Analista del Repositorio de Biopsia del Ministerio de Salud, CapabilityStatement Consumidor del Repositorio de Biopsia del Ministerio de Salud and CapabilityStatement Servidor del Repositorio de Biopsia del Ministerio de Salud

You can also check for usages in the FHIR IG Statistics

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

• Key Elements Table
• Differential Table
• Snapshot Table
• Statistics/References
• All

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
Specimen		0..*	Specimen	Sample for analysis
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored
status	?!Σ	0..1	code	available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type	SΣ	0..1	CodeableConcept	Tipo de material que forma el espécimen. Binding: Human Specimen Type Value Set (example): Set de Valores para los tipos de muestras que puedan ser obtenidos Additional Bindings Purpose Set de Valores de los Tipos de Especimen candidate
subject	SΣ	1..1	Reference(MINSAL Paciente)	Paciente de la muestra
receivedTime	SΣ	1..1	dateTime	Fecha de recepción de la muestra
collection	S	1..1	BackboneElement	Datos de la colección de la muestra
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
collector	SΣ	0..1	Reference(Perfil de Rol Profesional)	Profesional que recolecta la muestra
collected[x]	SΣ	1..1	dateTime	Fecha y hora de la colección de la muestra
method	S	1..1	CodeableConcept	Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
Slices for extension		1..*	Extension	Extension Slice: Unordered, Open by value:url
extension:MetodoProcedimiento	S	1..1	CodeableConcept	Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
bodySite	S	1..1	CodeableConcept	Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
Slices for extension				Content/Rules for all slices
extension:CalificadorLateralidad	S	0..1	CodeableConcept	Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
fastingStatus[x]	Σ	0..1		Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
fastingStatusCodeableConcept			CodeableConcept
fastingStatusDuration			Duration
note	S	0..*	Annotation	Nota de texto libre para describir la muestra, por ejemplo el detalle de topografico
text	SΣ	1..1	markdown	Nota de texto libre
Documentation for this format

Terminology Bindings

Path	Conformance	ValueSet	URI
Specimen.status	required	SpecimenStatus http://hl7.org/fhir/ValueSet/specimen-status|4.0.1 From the FHIR Standard
Specimen.type	example	HumanSpecimenTypeVS http://hl7.org/fhir/us/mcode/ValueSet/mcode-human-specimen-type-vs
Specimen.collection.method	extensible	ProcedimientosBiopsiaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-procedimientos-biopsias-VS From this IG
Specimen.collection.bodySite	extensible	EstructuraAnatomicaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-estructuras-anatomincas-VS From this IG
Specimen.collection.fastingStatus[x]	extensible	Hl7VSRelevantClincialInformation http://terminology.hl7.org/ValueSet/v2-0916|2.0.0

Constraints

Id	Grade	Path(s)	Details	Requirements
dom-2	error	Specimen	If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty()
dom-3	error	Specimen	If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4	error	Specimen	If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5	error	Specimen	If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty()
dom-6	best practice	Specimen	A resource should have narrative for robust management : text.`div`.exists()
ele-1	error	**ALL** elements	All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count())
ext-1	error	**ALL** extensions	Must have either extensions or value[x], not both : extension.exists() != value.exists()

This structure is derived from Specimen

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
Specimen			Specimen
type	S	0..1	CodeableConcept	Tipo de material que forma el espécimen. Binding: Human Specimen Type Value Set (example): Set de Valores para los tipos de muestras que puedan ser obtenidos Additional Bindings Purpose Set de Valores de los Tipos de Especimen candidate
subject	S	1..1	Reference(MINSAL Paciente)	Paciente de la muestra
receivedTime	S	1..1	dateTime	Fecha de recepción de la muestra
collection	S	1..1	BackboneElement	Datos de la colección de la muestra
collector	S	0..1	Reference(Perfil de Rol Profesional)	Profesional que recolecta la muestra
collected[x]	S	1..1	dateTime	Fecha y hora de la colección de la muestra
method	S	1..1	CodeableConcept	Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
extension		1..*	Extension	Extension
Slices for extension				Content/Rules for all slices
extension:MetodoProcedimiento	S	1..1	CodeableConcept	Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
bodySite	S	1..1	CodeableConcept	Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
Slices for extension				Content/Rules for all slices
extension:CalificadorLateralidad	S	0..1	CodeableConcept	Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
fastingStatus[x]		0..1	CodeableConcept, Duration	Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
note	S	0..*	Annotation	Nota de texto libre para describir la muestra, por ejemplo el detalle de topografico
text	S	1..1	markdown	Nota de texto libre
Documentation for this format

Terminology Bindings (Differential)

Path	Conformance	ValueSet	URI
Specimen.type	example	HumanSpecimenTypeVS http://hl7.org/fhir/us/mcode/ValueSet/mcode-human-specimen-type-vs
Specimen.collection.method	extensible	ProcedimientosBiopsiaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-procedimientos-biopsias-VS From this IG
Specimen.collection.bodySite	extensible	EstructuraAnatomicaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-estructuras-anatomincas-VS From this IG
Specimen.collection.fastingStatus[x]	extensible	Hl7VSRelevantClincialInformation http://terminology.hl7.org/ValueSet/v2-0916|2.0.0

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
Specimen		0..*	Specimen	Sample for analysis
id	Σ	0..1	id	Logical id of this artifact
meta	Σ	0..1	Meta	Metadata about the resource
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created
language		0..1	code	Language of the resource content Binding: CommonLanguages (preferred): A human language. Additional Bindings Purpose AllLanguages Max Binding
text		0..1	Narrative	Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements
contained		0..*	Resource	Contained, inline Resources
extension		0..*	Extension	Additional content defined by implementations
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored
identifier	Σ	0..*	Identifier	External Identifier
accessionIdentifier	Σ	0..1	Identifier	Identifier assigned by the lab
status	?!Σ	0..1	code	available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type	SΣ	0..1	CodeableConcept	Tipo de material que forma el espécimen. Binding: Human Specimen Type Value Set (example): Set de Valores para los tipos de muestras que puedan ser obtenidos Additional Bindings Purpose Set de Valores de los Tipos de Especimen candidate
subject	SΣ	1..1	Reference(MINSAL Paciente)	Paciente de la muestra
receivedTime	SΣ	1..1	dateTime	Fecha de recepción de la muestra
parent		0..*	Reference(Specimen)	Specimen from which this specimen originated
request		0..*	Reference(ServiceRequest)	Why the specimen was collected
collection	S	1..1	BackboneElement	Datos de la colección de la muestra
id		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
collector	SΣ	0..1	Reference(Perfil de Rol Profesional)	Profesional que recolecta la muestra
collected[x]	SΣ	1..1	dateTime	Fecha y hora de la colección de la muestra
duration	Σ	0..1	Duration	How long it took to collect specimen
quantity		0..1	SimpleQuantity	The quantity of specimen collected
method	S	1..1	CodeableConcept	Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
id		0..1	string	Unique id for inter-element referencing
Slices for extension		1..*	Extension	Extension Slice: Unordered, Open by value:url
extension:MetodoProcedimiento	S	1..1	CodeableConcept	Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
coding	Σ	0..*	Coding	Code defined by a terminology system
text	Σ	0..1	string	Plain text representation of the concept
bodySite	S	1..1	CodeableConcept	Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
id		0..1	string	Unique id for inter-element referencing
Slices for extension		0..*	Extension	Additional content defined by implementations Slice: Unordered, Open by value:url
extension:CalificadorLateralidad	S	0..1	CodeableConcept	Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
coding	Σ	0..*	Coding	Code defined by a terminology system
text	Σ	0..1	string	Plain text representation of the concept
fastingStatus[x]	Σ	0..1		Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
fastingStatusCodeableConcept			CodeableConcept
fastingStatusDuration			Duration
processing		0..*	BackboneElement	Processing and processing step details
id		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
description		0..1	string	Textual description of procedure
procedure		0..1	CodeableConcept	Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen.
additive		0..*	Reference(Substance)	Material used in the processing step
time[x]		0..1		Date and time of specimen processing
timeDateTime			dateTime
timePeriod			Period
container		0..*	BackboneElement	Direct container of specimen (tube/slide, etc.)
id		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
identifier	Σ	0..*	Identifier	Id for the container
description		0..1	string	Textual description of the container
type		0..1	CodeableConcept	Kind of container directly associated with specimen Binding: SpecimenContainerType (example): Type of specimen container.
capacity		0..1	SimpleQuantity	Container volume or size
specimenQuantity		0..1	SimpleQuantity	Quantity of specimen within container
additive[x]		0..1		Additive associated with container Binding: hl7VS-additivePreservative (example): Substance added to specimen container.
additiveCodeableConcept			CodeableConcept
additiveReference			Reference(Substance)
condition	Σ	0..*	CodeableConcept	State of the specimen Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen.
note	S	0..*	Annotation	Nota de texto libre para describir la muestra, por ejemplo el detalle de topografico
id		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations Slice: Unordered, Open by value:url
author[x]	Σ	0..1		Individual responsible for the annotation
authorReference			Reference(Practitioner | Patient | RelatedPerson | Organization)
authorString			string
time	Σ	0..1	dateTime	When the annotation was made
text	SΣ	1..1	markdown	Nota de texto libre
Documentation for this format

Terminology Bindings

Path	Conformance	ValueSet	URI
Specimen.language	preferred	CommonLanguages http://hl7.org/fhir/ValueSet/languages From the FHIR Standard Additional Bindings Purpose AllLanguages Max Binding
Specimen.status	required	SpecimenStatus http://hl7.org/fhir/ValueSet/specimen-status|4.0.1 From the FHIR Standard
Specimen.type	example	HumanSpecimenTypeVS http://hl7.org/fhir/us/mcode/ValueSet/mcode-human-specimen-type-vs
Specimen.collection.method	extensible	ProcedimientosBiopsiaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-procedimientos-biopsias-VS From this IG
Specimen.collection.bodySite	extensible	EstructuraAnatomicaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-estructuras-anatomincas-VS From this IG
Specimen.collection.fastingStatus[x]	extensible	Hl7VSRelevantClincialInformation http://terminology.hl7.org/ValueSet/v2-0916|2.0.0
Specimen.processing.procedure	example	SpecimenProcessingProcedure http://hl7.org/fhir/ValueSet/specimen-processing-procedure From the FHIR Standard
Specimen.container.type	example	SpecimenContainerType http://hl7.org/fhir/ValueSet/specimen-container-type From the FHIR Standard
Specimen.container.additive[x]	example	Hl7VSAdditivePreservative http://terminology.hl7.org/ValueSet/v2-0371
Specimen.condition	extensible	Hl7VSSpecimenCondition http://terminology.hl7.org/ValueSet/v2-0493

Constraints

Id	Grade	Path(s)	Details	Requirements
dom-2	error	Specimen	If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty()
dom-3	error	Specimen	If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4	error	Specimen	If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5	error	Specimen	If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty()
dom-6	best practice	Specimen	A resource should have narrative for robust management : text.`div`.exists()
ele-1	error	**ALL** elements	All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count())
ext-1	error	**ALL** extensions	Must have either extensions or value[x], not both : extension.exists() != value.exists()

This structure is derived from Specimen

Summary

Mandatory: 8 elements
Must-Support: 12 elements

Structures

This structure refers to these other structures:

• MINSAL Paciente (https://interoperabilidad.minsal.cl/fhir/ig/nid/StructureDefinition/MINSALPaciente)
• Perfil de Rol Profesional (https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-rol-profesional-minsal)

Extensions

This structure refers to these extensions:

• https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-tipo-procedimientos-biopsias
• http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier

Maturity: 1

Key Elements View

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
Specimen		0..*	Specimen	Sample for analysis
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored
status	?!Σ	0..1	code	available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type	SΣ	0..1	CodeableConcept	Tipo de material que forma el espécimen. Binding: Human Specimen Type Value Set (example): Set de Valores para los tipos de muestras que puedan ser obtenidos Additional Bindings Purpose Set de Valores de los Tipos de Especimen candidate
subject	SΣ	1..1	Reference(MINSAL Paciente)	Paciente de la muestra
receivedTime	SΣ	1..1	dateTime	Fecha de recepción de la muestra
collection	S	1..1	BackboneElement	Datos de la colección de la muestra
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
collector	SΣ	0..1	Reference(Perfil de Rol Profesional)	Profesional que recolecta la muestra
collected[x]	SΣ	1..1	dateTime	Fecha y hora de la colección de la muestra
method	S	1..1	CodeableConcept	Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
Slices for extension		1..*	Extension	Extension Slice: Unordered, Open by value:url
extension:MetodoProcedimiento	S	1..1	CodeableConcept	Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
bodySite	S	1..1	CodeableConcept	Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
Slices for extension				Content/Rules for all slices
extension:CalificadorLateralidad	S	0..1	CodeableConcept	Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
fastingStatus[x]	Σ	0..1		Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
fastingStatusCodeableConcept			CodeableConcept
fastingStatusDuration			Duration
note	S	0..*	Annotation	Nota de texto libre para describir la muestra, por ejemplo el detalle de topografico
text	SΣ	1..1	markdown	Nota de texto libre
Documentation for this format

Terminology Bindings

Path	Conformance	ValueSet	URI
Specimen.status	required	SpecimenStatus http://hl7.org/fhir/ValueSet/specimen-status|4.0.1 From the FHIR Standard
Specimen.type	example	HumanSpecimenTypeVS http://hl7.org/fhir/us/mcode/ValueSet/mcode-human-specimen-type-vs
Specimen.collection.method	extensible	ProcedimientosBiopsiaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-procedimientos-biopsias-VS From this IG
Specimen.collection.bodySite	extensible	EstructuraAnatomicaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-estructuras-anatomincas-VS From this IG
Specimen.collection.fastingStatus[x]	extensible	Hl7VSRelevantClincialInformation http://terminology.hl7.org/ValueSet/v2-0916|2.0.0

Constraints

Id	Grade	Path(s)	Details	Requirements
dom-2	error	Specimen	If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty()
dom-3	error	Specimen	If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4	error	Specimen	If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5	error	Specimen	If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty()
dom-6	best practice	Specimen	A resource should have narrative for robust management : text.`div`.exists()
ele-1	error	**ALL** elements	All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count())
ext-1	error	**ALL** extensions	Must have either extensions or value[x], not both : extension.exists() != value.exists()

Differential View

This structure is derived from Specimen

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
Specimen			Specimen
type	S	0..1	CodeableConcept	Tipo de material que forma el espécimen. Binding: Human Specimen Type Value Set (example): Set de Valores para los tipos de muestras que puedan ser obtenidos Additional Bindings Purpose Set de Valores de los Tipos de Especimen candidate
subject	S	1..1	Reference(MINSAL Paciente)	Paciente de la muestra
receivedTime	S	1..1	dateTime	Fecha de recepción de la muestra
collection	S	1..1	BackboneElement	Datos de la colección de la muestra
collector	S	0..1	Reference(Perfil de Rol Profesional)	Profesional que recolecta la muestra
collected[x]	S	1..1	dateTime	Fecha y hora de la colección de la muestra
method	S	1..1	CodeableConcept	Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
extension		1..*	Extension	Extension
Slices for extension				Content/Rules for all slices
extension:MetodoProcedimiento	S	1..1	CodeableConcept	Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
bodySite	S	1..1	CodeableConcept	Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
Slices for extension				Content/Rules for all slices
extension:CalificadorLateralidad	S	0..1	CodeableConcept	Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
fastingStatus[x]		0..1	CodeableConcept, Duration	Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
note	S	0..*	Annotation	Nota de texto libre para describir la muestra, por ejemplo el detalle de topografico
text	S	1..1	markdown	Nota de texto libre
Documentation for this format

Terminology Bindings (Differential)

Path	Conformance	ValueSet	URI
Specimen.type	example	HumanSpecimenTypeVS http://hl7.org/fhir/us/mcode/ValueSet/mcode-human-specimen-type-vs
Specimen.collection.method	extensible	ProcedimientosBiopsiaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-procedimientos-biopsias-VS From this IG
Specimen.collection.bodySite	extensible	EstructuraAnatomicaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-estructuras-anatomincas-VS From this IG
Specimen.collection.fastingStatus[x]	extensible	Hl7VSRelevantClincialInformation http://terminology.hl7.org/ValueSet/v2-0916|2.0.0

Snapshot View

Name	Flags	Card.	Type	Description & Constraints    Filter: Bindings Constraints Obligations
Specimen		0..*	Specimen	Sample for analysis
id	Σ	0..1	id	Logical id of this artifact
meta	Σ	0..1	Meta	Metadata about the resource
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created
language		0..1	code	Language of the resource content Binding: CommonLanguages (preferred): A human language. Additional Bindings Purpose AllLanguages Max Binding
text		0..1	Narrative	Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements
contained		0..*	Resource	Contained, inline Resources
extension		0..*	Extension	Additional content defined by implementations
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored
identifier	Σ	0..*	Identifier	External Identifier
accessionIdentifier	Σ	0..1	Identifier	Identifier assigned by the lab
status	?!Σ	0..1	code	available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type	SΣ	0..1	CodeableConcept	Tipo de material que forma el espécimen. Binding: Human Specimen Type Value Set (example): Set de Valores para los tipos de muestras que puedan ser obtenidos Additional Bindings Purpose Set de Valores de los Tipos de Especimen candidate
subject	SΣ	1..1	Reference(MINSAL Paciente)	Paciente de la muestra
receivedTime	SΣ	1..1	dateTime	Fecha de recepción de la muestra
parent		0..*	Reference(Specimen)	Specimen from which this specimen originated
request		0..*	Reference(ServiceRequest)	Why the specimen was collected
collection	S	1..1	BackboneElement	Datos de la colección de la muestra
id		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
collector	SΣ	0..1	Reference(Perfil de Rol Profesional)	Profesional que recolecta la muestra
collected[x]	SΣ	1..1	dateTime	Fecha y hora de la colección de la muestra
duration	Σ	0..1	Duration	How long it took to collect specimen
quantity		0..1	SimpleQuantity	The quantity of specimen collected
method	S	1..1	CodeableConcept	Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
id		0..1	string	Unique id for inter-element referencing
Slices for extension		1..*	Extension	Extension Slice: Unordered, Open by value:url
extension:MetodoProcedimiento	S	1..1	CodeableConcept	Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
coding	Σ	0..*	Coding	Code defined by a terminology system
text	Σ	0..1	string	Plain text representation of the concept
bodySite	S	1..1	CodeableConcept	Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
id		0..1	string	Unique id for inter-element referencing
Slices for extension		0..*	Extension	Additional content defined by implementations Slice: Unordered, Open by value:url
extension:CalificadorLateralidad	S	0..1	CodeableConcept	Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
coding	Σ	0..*	Coding	Code defined by a terminology system
text	Σ	0..1	string	Plain text representation of the concept
fastingStatus[x]	Σ	0..1		Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
fastingStatusCodeableConcept			CodeableConcept
fastingStatusDuration			Duration
processing		0..*	BackboneElement	Processing and processing step details
id		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
description		0..1	string	Textual description of procedure
procedure		0..1	CodeableConcept	Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen.
additive		0..*	Reference(Substance)	Material used in the processing step
time[x]		0..1		Date and time of specimen processing
timeDateTime			dateTime
timePeriod			Period
container		0..*	BackboneElement	Direct container of specimen (tube/slide, etc.)
id		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
identifier	Σ	0..*	Identifier	Id for the container
description		0..1	string	Textual description of the container
type		0..1	CodeableConcept	Kind of container directly associated with specimen Binding: SpecimenContainerType (example): Type of specimen container.
capacity		0..1	SimpleQuantity	Container volume or size
specimenQuantity		0..1	SimpleQuantity	Quantity of specimen within container
additive[x]		0..1		Additive associated with container Binding: hl7VS-additivePreservative (example): Substance added to specimen container.
additiveCodeableConcept			CodeableConcept
additiveReference			Reference(Substance)
condition	Σ	0..*	CodeableConcept	State of the specimen Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen.
note	S	0..*	Annotation	Nota de texto libre para describir la muestra, por ejemplo el detalle de topografico
id		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations Slice: Unordered, Open by value:url
author[x]	Σ	0..1		Individual responsible for the annotation
authorReference			Reference(Practitioner | Patient | RelatedPerson | Organization)
authorString			string
time	Σ	0..1	dateTime	When the annotation was made
text	SΣ	1..1	markdown	Nota de texto libre
Documentation for this format

Terminology Bindings

Path	Conformance	ValueSet	URI
Specimen.language	preferred	CommonLanguages http://hl7.org/fhir/ValueSet/languages From the FHIR Standard Additional Bindings Purpose AllLanguages Max Binding
Specimen.status	required	SpecimenStatus http://hl7.org/fhir/ValueSet/specimen-status|4.0.1 From the FHIR Standard
Specimen.type	example	HumanSpecimenTypeVS http://hl7.org/fhir/us/mcode/ValueSet/mcode-human-specimen-type-vs
Specimen.collection.method	extensible	ProcedimientosBiopsiaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-procedimientos-biopsias-VS From this IG
Specimen.collection.bodySite	extensible	EstructuraAnatomicaVS https://interoperabilidad.minsal.cl/fhir/ig/r2bo/ValueSet/r2bo-estructuras-anatomincas-VS From this IG
Specimen.collection.fastingStatus[x]	extensible	Hl7VSRelevantClincialInformation http://terminology.hl7.org/ValueSet/v2-0916|2.0.0
Specimen.processing.procedure	example	SpecimenProcessingProcedure http://hl7.org/fhir/ValueSet/specimen-processing-procedure From the FHIR Standard
Specimen.container.type	example	SpecimenContainerType http://hl7.org/fhir/ValueSet/specimen-container-type From the FHIR Standard
Specimen.container.additive[x]	example	Hl7VSAdditivePreservative http://terminology.hl7.org/ValueSet/v2-0371
Specimen.condition	extensible	Hl7VSSpecimenCondition http://terminology.hl7.org/ValueSet/v2-0493

Constraints

Id	Grade	Path(s)	Details	Requirements
dom-2	error	Specimen	If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty()
dom-3	error	Specimen	If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4	error	Specimen	If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5	error	Specimen	If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty()
dom-6	best practice	Specimen	A resource should have narrative for robust management : text.`div`.exists()
ele-1	error	**ALL** elements	All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count())
ext-1	error	**ALL** extensions	Must have either extensions or value[x], not both : extension.exists() != value.exists()

This structure is derived from Specimen

Summary

Mandatory: 8 elements
Must-Support: 12 elements

Structures

This structure refers to these other structures:

• MINSAL Paciente (https://interoperabilidad.minsal.cl/fhir/ig/nid/StructureDefinition/MINSALPaciente)
• Perfil de Rol Profesional (https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-rol-profesional-minsal)

Extensions

This structure refers to these extensions:

• https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-tipo-procedimientos-biopsias
• http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier

Maturity: 1

Other representations of profile: CSV, Excel, Schematron