Kenya Disease Surveillance FHIR Implementation Guide.
0.1.0 - ci-build
Kenya Disease Surveillance FHIR Implementation Guide.
0.1.0 - ci-build
Kenya Disease Surveillance FHIR Implementation Guide., published by Kenya National Public Health Institute. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/IntelliSOFT-Consulting/Surveillance-FHIR-IG/ and changes regularly. See the Directory of published versions
| Draft as of 2026-05-04 |
{
"resourceType" : "StructureMap",
"id" : "Moh505SectionABMap",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: StructureMap Moh505SectionABMap</b></p><a name=\"Moh505SectionABMap\"> </a><a name=\"hcMoh505SectionABMap\"> </a><pre class=\"fml\">\r\n<b>map</b><span style=\"color: navy\"> "</span>http://example.org/StructureMap/Moh505SectionABMap<span style=\"color: navy\">" = "</span>Moh505SectionABMap<span style=\"color: navy\">"\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">MOH 505 Section A and B QuestionnaireResponse to FHIR resources</span>\r\n<span style=\"color: navy\">// </span><span style=\"color: green\">Maps disease tally counts to Observation resources (one per disease per reporting period)</span>\r\n<span style=\"color: navy\">// </span><span style=\"color: green\">Observation.component encodes: under-5 cases, under-5 deaths, over-5 cases, over-5 deaths</span>\r\n\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R4/questionnaireresponse.html\" title=\"QuestionnaireResponse\">http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse</a><span style=\"color: navy\">" </span><b>alias </b>QuestionnaireResponse <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R4/bundle.html\" title=\"Bundle\">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style=\"color: navy\">" </span><b>alias </b>Bundle <b>as </b><b>target</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R4/observation.html\" title=\"Observation\">http://hl7.org/fhir/StructureDefinition/Observation</a><span style=\"color: navy\">" </span><b>alias </b>Observation <b>as </b><b>target</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R4/datatypes.html#BackboneElement\" title=\"BackboneElement\">http://hl7.org/fhir/StructureDefinition/BackboneElement</a><span style=\"color: navy\">" </span><b>alias </b>BackboneElement <b>as </b><b>source</b>\r\n\r\n<b>group </b>Moh505SectionABMap<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>QuestionnaireResponse, <b>target</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>Bundle<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> src<span style=\"color: navy\"><b> -> </b></span>bundle.id = <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span> <i>"bundleId"</i><span style=\"color: navy\">;</span>\r\n src<span style=\"color: navy\"><b> -> </b></span>bundle.type = <span style=\"color: blue\">'transaction'</span> <i>"bundleType"</i><span style=\"color: navy\">;</span>\r\n src.item<b> as </b><span style=\"color: maroon\">page</span><b> where </b>linkId = '306799299'<b> then</b><span style=\"color: navy\"> {\r\n</span> <span style=\"color: navy\">// </span><span style=\"color: green\">── AEFI ──────────────────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = '745196148424'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"aefiObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"aefi"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Acute Jaundice ────────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'acute-jaundice'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'acute-jaundice-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'acute-jaundice-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'acute-jaundice-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'acute-jaundice-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"ajObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"acuteJaundice"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Acute Malnutrition ────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'acute-malnutrition'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'acute-malnutrition-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'acute-malnutrition-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'acute-malnutrition-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'acute-malnutrition-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"amObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"acuteMalnutrition"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── AFP (Poliomyelitis) ───────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'afp-poliomyelitis'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'afp-poliomyelitis-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'afp-poliomyelitis-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'afp-poliomyelitis-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'afp-poliomyelitis-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"afpObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"afp"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Anthrax ───────────────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'anthrax'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'anthrax-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'anthrax-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'anthrax-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'anthrax-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"anthraxObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"anthrax"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Cholera ───────────────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'cholera'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'cholera-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'cholera-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'cholera-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'cholera-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"choleraObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"cholera"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Chikungunya ───────────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'chikungunya'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'chikungunya-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'chikungunya-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'chikungunya-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'chikungunya-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"chikungunyaObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"chikungunya"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── COVID-19 ──────────────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'covid-19'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'covid-19-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'covid-19-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'covid-19-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'covid-19-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"covidObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"covid19"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Dengue ────────────────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'dengue'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'dengue-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'dengue-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'dengue-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'dengue-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"dengueObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"dengue"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Dysentery (Bacillary) ─────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'dysentery-bacillary'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'dysentery-bacillary-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'dysentery-bacillary-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'dysentery-bacillary-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'dysentery-bacillary-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"dysenteryObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"dysenteryBacillary"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Guinea Worm Disease ───────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'guinea-worm-disease'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'guinea-worm-disease-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'guinea-worm-disease-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'guinea-worm-disease-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'guinea-worm-disease-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"guineaWormObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"guineaWorm"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Measles ───────────────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'measles'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'measles-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'measles-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'measles-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'measles-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"measlesObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"measlesSectionAB"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Suspected Malaria ─────────────────────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = 'suspected-malaria'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = 'suspected-malaria-under5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = 'suspected-malaria-under5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = 'suspected-malaria-over5-cases'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = 'suspected-malaria-over5-deaths'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"malariaObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"suspectedMalaria"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Bacterial Meningitis (numeric linkIds) ────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = '912271576972'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = '871055915491'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = '388760057096'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = '483347883552'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = '983942974596'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"bactMenObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"bacterialMeningitis"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Neonatal Tetanus (numeric linkIds) ────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = '328118347844'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = '535840524666'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = '703609548617'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObsPartial<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"neonatalTetObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"neonatalTetanus"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">── Onchocerciasis (numeric linkIds) ──────────────────────────────────────</span>\r\n page.item<b> as </b><span style=\"color: maroon\">cb</span><b> where </b>linkId = '579664664652'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5c</span><b> where </b>linkId = '327509292099'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">u5d</span><b> where </b>linkId = '928912977066'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5c</span><b> where </b>linkId = '456099214566'<b> then</b><span style=\"color: navy\"> {\r\n</span> page.item<b> as </b><span style=\"color: maroon\">o5d</span><b> where </b>linkId = '749207004486'<b> then</b><span style=\"color: navy\"> {\r\n</span> cb<b> where </b>answer.exists()<span style=\"color: navy\"><b> -> </b></span> bundle.entry<b> as </b><span style=\"color: maroon\">e</span><span style=\"color: navy\">, </span> e.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obs</span><b> then </b>CreateSectionABObs<span style=\"color: navy\">(</span><span style=\"color: maroon\">cb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">u5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5c</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">o5d</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">obs</span><span style=\"color: navy\">)</span> <i>"onchocerciasisObs"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5d"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5c"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"onchocerciasis"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"diseasesPage"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">Helper: create a disease Observation with 4 components (under-5 cases/deaths, over-5 cases/deaths)</span>\r\n<b>group </b>CreateSectionABObs<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">cb</span><span style=\"color: navy\"> : </span>BackboneElement, <b>source</b> <span style=\"color: maroon\">u5CasesItem</span><span style=\"color: navy\"> : </span>BackboneElement, <b>source</b> <span style=\"color: maroon\">u5DeathsItem</span><span style=\"color: navy\"> : </span>BackboneElement, <b>source</b> <span style=\"color: maroon\">o5CasesItem</span><span style=\"color: navy\"> : </span>BackboneElement, <b>source</b> <span style=\"color: maroon\">o5DeathsItem</span><span style=\"color: navy\"> : </span>BackboneElement, <b>target</b> <span style=\"color: maroon\">obs</span><span style=\"color: navy\"> : </span>Observation<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> cb<span style=\"color: navy\"><b> -> </b></span>obs.id = <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span> <i>"obsId"</i><span style=\"color: navy\">;</span>\r\n cb<span style=\"color: navy\"><b> -> </b></span>obs.status = <span style=\"color: blue\">'final'</span> <i>"status"</i><span style=\"color: navy\">;</span>\r\n cb<span style=\"color: navy\"><b> -> </b></span>obs.category<b> as </b><span style=\"color: maroon\">cat</span><b> then</b><span style=\"color: navy\"> {\r\n</span> cb<span style=\"color: navy\"><b> -> </b></span> cat.coding<b> as </b><span style=\"color: maroon\">cod</span><span style=\"color: navy\">, </span> cod.system = <span style=\"color: blue\">'http://terminology.hl7.org/CodeSystem/observation-category'</span><span style=\"color: navy\">, </span> cod.code = <span style=\"color: blue\">'survey'</span><span style=\"color: navy\">, </span> cod.display = <span style=\"color: blue\">'Survey'</span> <i>"cat"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"category"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">Disease code from the checked answer</span>\r\n cb.answer first<b> as </b><span style=\"color: maroon\">ans</span><span style=\"color: navy\"><b> -> </b></span>obs.code<b> as </b><span style=\"color: maroon\">code</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ans<span style=\"color: navy\"><b> -> </b></span> code.coding<b> as </b><span style=\"color: maroon\">cod</span><span style=\"color: navy\">, </span> cod.system = <span style=\"color: blue\">'http://example.org/CodeSystem/moh505-disease'</span><span style=\"color: navy\">, </span> cod.code = <span style=\"color: navy\">(</span>ans.valueCoding.code<span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> cod.display = <span style=\"color: navy\">(</span>ans.valueCoding.display<span style=\"color: navy\">)</span> <i>"codeCoding"</i><span style=\"color: navy\">;</span>\r\n ans<span style=\"color: navy\"><b> -> </b></span>code.text = <span style=\"color: navy\">(</span>ans.valueCoding.display<span style=\"color: navy\">)</span> <i>"codeText"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"diseaseCode"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">Component: Under 5 Cases</span>\r\n u5CasesItem.answer first<b> as </b><span style=\"color: maroon\">ans</span><span style=\"color: navy\"><b> -> </b></span>obs.component<b> as </b><span style=\"color: maroon\">comp</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ans<span style=\"color: navy\"><b> -> </b></span> comp.code<b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.text = <span style=\"color: blue\">'Under 5 Cases'</span> <i>"compCode"</i><span style=\"color: navy\">;</span>\r\n ans<span style=\"color: navy\"><b> -> </b></span>comp.valueInteger = <span style=\"color: maroon\">ans.valueInteger</span> <i>"compValue"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5CasesComp"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">Component: Under 5 Deaths</span>\r\n u5DeathsItem.answer first<b> as </b><span style=\"color: maroon\">ans</span><span style=\"color: navy\"><b> -> </b></span>obs.component<b> as </b><span style=\"color: maroon\">comp</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ans<span style=\"color: navy\"><b> -> </b></span> comp.code<b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.text = <span style=\"color: blue\">'Under 5 Deaths'</span> <i>"compCode"</i><span style=\"color: navy\">;</span>\r\n ans<span style=\"color: navy\"><b> -> </b></span>comp.valueInteger = <span style=\"color: maroon\">ans.valueInteger</span> <i>"compValue"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5DeathsComp"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">Component: Over 5 Cases</span>\r\n o5CasesItem.answer first<b> as </b><span style=\"color: maroon\">ans</span><span style=\"color: navy\"><b> -> </b></span>obs.component<b> as </b><span style=\"color: maroon\">comp</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ans<span style=\"color: navy\"><b> -> </b></span> comp.code<b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.text = <span style=\"color: blue\">'Over 5 Cases'</span> <i>"compCode"</i><span style=\"color: navy\">;</span>\r\n ans<span style=\"color: navy\"><b> -> </b></span>comp.valueInteger = <span style=\"color: maroon\">ans.valueInteger</span> <i>"compValue"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5CasesComp"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">Component: Over 5 Deaths</span>\r\n o5DeathsItem.answer first<b> as </b><span style=\"color: maroon\">ans</span><span style=\"color: navy\"><b> -> </b></span>obs.component<b> as </b><span style=\"color: maroon\">comp</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ans<span style=\"color: navy\"><b> -> </b></span> comp.code<b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.text = <span style=\"color: blue\">'Over 5 Deaths'</span> <i>"compCode"</i><span style=\"color: navy\">;</span>\r\n ans<span style=\"color: navy\"><b> -> </b></span>comp.valueInteger = <span style=\"color: maroon\">ans.valueInteger</span> <i>"compValue"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"o5DeathsComp"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">Helper: create an Observation with only under-5 components (for diseases like Neonatal Tetanus)</span>\r\n<b>group </b>CreateSectionABObsPartial<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">cb</span><span style=\"color: navy\"> : </span>BackboneElement, <b>source</b> <span style=\"color: maroon\">u5CasesItem</span><span style=\"color: navy\"> : </span>BackboneElement, <b>source</b> <span style=\"color: maroon\">u5DeathsItem</span><span style=\"color: navy\"> : </span>BackboneElement, <b>target</b> <span style=\"color: maroon\">obs</span><span style=\"color: navy\"> : </span>Observation<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> cb<span style=\"color: navy\"><b> -> </b></span>obs.id = <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span> <i>"obsId"</i><span style=\"color: navy\">;</span>\r\n cb<span style=\"color: navy\"><b> -> </b></span>obs.status = <span style=\"color: blue\">'final'</span> <i>"status"</i><span style=\"color: navy\">;</span>\r\n cb<span style=\"color: navy\"><b> -> </b></span>obs.category<b> as </b><span style=\"color: maroon\">cat</span><b> then</b><span style=\"color: navy\"> {\r\n</span> cb<span style=\"color: navy\"><b> -> </b></span> cat.coding<b> as </b><span style=\"color: maroon\">cod</span><span style=\"color: navy\">, </span> cod.system = <span style=\"color: blue\">'http://terminology.hl7.org/CodeSystem/observation-category'</span><span style=\"color: navy\">, </span> cod.code = <span style=\"color: blue\">'survey'</span><span style=\"color: navy\">, </span> cod.display = <span style=\"color: blue\">'Survey'</span> <i>"cat"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"category"</i><span style=\"color: navy\">;</span>\r\n cb.answer first<b> as </b><span style=\"color: maroon\">ans</span><span style=\"color: navy\"><b> -> </b></span>obs.code<b> as </b><span style=\"color: maroon\">code</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ans<span style=\"color: navy\"><b> -> </b></span> code.coding<b> as </b><span style=\"color: maroon\">cod</span><span style=\"color: navy\">, </span> cod.system = <span style=\"color: blue\">'http://example.org/CodeSystem/moh505-disease'</span><span style=\"color: navy\">, </span> cod.code = <span style=\"color: navy\">(</span>ans.valueCoding.code<span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> cod.display = <span style=\"color: navy\">(</span>ans.valueCoding.display<span style=\"color: navy\">)</span> <i>"codeCoding"</i><span style=\"color: navy\">;</span>\r\n ans<span style=\"color: navy\"><b> -> </b></span>code.text = <span style=\"color: navy\">(</span>ans.valueCoding.display<span style=\"color: navy\">)</span> <i>"codeText"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"diseaseCode"</i><span style=\"color: navy\">;</span>\r\n u5CasesItem.answer first<b> as </b><span style=\"color: maroon\">ans</span><span style=\"color: navy\"><b> -> </b></span>obs.component<b> as </b><span style=\"color: maroon\">comp</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ans<span style=\"color: navy\"><b> -> </b></span> comp.code<b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.text = <span style=\"color: blue\">'Under 5 Cases'</span> <i>"compCode"</i><span style=\"color: navy\">;</span>\r\n ans<span style=\"color: navy\"><b> -> </b></span>comp.valueInteger = <span style=\"color: maroon\">ans.valueInteger</span> <i>"compValue"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5CasesComp"</i><span style=\"color: navy\">;</span>\r\n u5DeathsItem.answer first<b> as </b><span style=\"color: maroon\">ans</span><span style=\"color: navy\"><b> -> </b></span>obs.component<b> as </b><span style=\"color: maroon\">comp</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ans<span style=\"color: navy\"><b> -> </b></span> comp.code<b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.text = <span style=\"color: blue\">'Under 5 Deaths'</span> <i>"compCode"</i><span style=\"color: navy\">;</span>\r\n ans<span style=\"color: navy\"><b> -> </b></span>comp.valueInteger = <span style=\"color: maroon\">ans.valueInteger</span> <i>"compValue"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"u5DeathsComp"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
},
"url" : "http://example.org/StructureMap/Moh505SectionABMap",
"version" : "0.1.0",
"name" : "Moh505SectionABMap",
"status" : "draft",
"date" : "2026-05-04T06:19:40+00:00",
"publisher" : "Kenya National Public Health Institute",
"contact" : [
{
"name" : "Kenya National Public Health Institute",
"telecom" : [
{
"system" : "url",
"value" : "https://www.nphi.go.ke/"
}
]
},
{
"name" : "Kenya National Public Health Institute",
"telecom" : [
{
"system" : "url",
"value" : "https://www.nphi.go.ke/",
"use" : "work"
}
]
}
],
"description" : "MOH 505 Section A and B QuestionnaireResponse to FHIR resources\r\nMaps disease tally counts to Observation resources (one per disease per reporting period)\r\nObservation.component encodes: under-5 cases, under-5 deaths, over-5 cases, over-5 deaths",
"jurisdiction" : [
{
"coding" : [
{
"system" : "urn:iso:std:iso:3166",
"code" : "KE",
"display" : "Kenya"
}
]
}
],
"structure" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse",
"mode" : "source",
"alias" : "QuestionnaireResponse"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/Bundle",
"mode" : "target",
"alias" : "Bundle"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/Observation",
"mode" : "target",
"alias" : "Observation"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/BackboneElement",
"mode" : "source",
"alias" : "BackboneElement"
}
],
"group" : [
{
"name" : "Moh505SectionABMap",
"typeMode" : "none",
"input" : [
{
"name" : "src",
"type" : "QuestionnaireResponse",
"mode" : "source"
},
{
"name" : "bundle",
"type" : "Bundle",
"mode" : "target"
}
],
"rule" : [
{
"name" : "bundleId",
"source" : [
{
"context" : "src"
}
],
"target" : [
{
"context" : "bundle",
"contextType" : "variable",
"element" : "id",
"transform" : "uuid"
}
]
},
{
"name" : "bundleType",
"source" : [
{
"context" : "src"
}
],
"target" : [
{
"context" : "bundle",
"contextType" : "variable",
"element" : "type",
"transform" : "copy",
"parameter" : [
{
"valueString" : "transaction"
}
]
}
]
},
{
"name" : "diseasesPage",
"source" : [
{
"context" : "src",
"element" : "item",
"variable" : "page",
"condition" : "linkId = '306799299'"
}
],
"rule" : [
{
"name" : "aefi",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "cb",
"condition" : "linkId = '745196148424'"
}
],
"rule" : [
{
"name" : "u5c",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "u5c",
"condition" : "linkId = 'under5-cases'"
}
],
"rule" : [
{
"name" : "u5d",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "u5d",
"condition" : "linkId = 'under5-deaths'"
}
],
"rule" : [
{
"name" : "o5c",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "o5c",
"condition" : "linkId = 'over5-cases'"
}
],
"rule" : [
{
"name" : "o5d",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "o5d",
"condition" : "linkId = 'over5-deaths'"
}
],
"rule" : [
{
"name" : "aefiObs",
"source" : [
{
"context" : "cb",
"condition" : "answer.exists()"
}
],
"target" : [
{
"context" : "bundle",
"contextType" : "variable",
"element" : "entry",
"variable" : "e"
},
{
"context" : "e",
"contextType" : "variable",
"element" : "resource",
"variable" : "obs",
"transform" : "create",
"parameter" : [
{
"valueString" : "Observation"
}
]
}
],
"dependent" : [
{
"name" : "CreateSectionABObs",
"variable" : [
"cb",
"u5c",
"u5d",
"o5c",
"o5d",
"obs"
]
}
]
}
]
}
]
}
]
}
]
}
]
},
{
"name" : "acuteJaundice",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "cb",
"condition" : "linkId = 'acute-jaundice'"
}
],
"rule" : [
{
"name" : "u5c",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "u5c",
"condition" : "linkId = 'acute-jaundice-under5-cases'"
}
],
"rule" : [
{
"name" : "u5d",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "u5d",
"condition" : "linkId = 'acute-jaundice-under5-deaths'"
}
],
"rule" : [
{
"name" : "o5c",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "o5c",
"condition" : "linkId = 'acute-jaundice-over5-cases'"
}
],
"rule" : [
{
"name" : "o5d",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "o5d",
"condition" : "linkId = 'acute-jaundice-over5-deaths'"
}
],
"rule" : [
{
"name" : "ajObs",
"source" : [
{
"context" : "cb",
"condition" : "answer.exists()"
}
],
"target" : [
{
"context" : "bundle",
"contextType" : "variable",
"element" : "entry",
"variable" : "e"
},
{
"context" : "e",
"contextType" : "variable",
"element" : "resource",
"variable" : "obs",
"transform" : "create",
"parameter" : [
{
"valueString" : "Observation"
}
]
}
],
"dependent" : [
{
"name" : "CreateSectionABObs",
"variable" : [
"cb",
"u5c",
"u5d",
"o5c",
"o5d",
"obs"
]
}
]
}
]
}
]
}
]
}
]
}
]
},
{
"name" : "acuteMalnutrition",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "cb",
"condition" : "linkId = 'acute-malnutrition'"
}
],
"rule" : [
{
"name" : "u5c",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "u5c",
"condition" : "linkId = 'acute-malnutrition-under5-cases'"
}
],
"rule" : [
{
"name" : "u5d",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "u5d",
"condition" : "linkId = 'acute-malnutrition-under5-deaths'"
}
],
"rule" : [
{
"name" : "o5c",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "o5c",
"condition" : "linkId = 'acute-malnutrition-over5-cases'"
}
],
"rule" : [
{
"name" : "o5d",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "o5d",
"condition" : "linkId = 'acute-malnutrition-over5-deaths'"
}
],
"rule" : [
{
"name" : "amObs",
"source" : [
{
"context" : "cb",
"condition" : "answer.exists()"
}
],
"target" : [
{
"context" : "bundle",
"contextType" : "variable",
"element" : "entry",
"variable" : "e"
},
{
"context" : "e",
"contextType" : "variable",
"element" : "resource",
"variable" : "obs",
"transform" : "create",
"parameter" : [
{
"valueString" : "Observation"
}
]
}
],
"dependent" : [
{
"name" : "CreateSectionABObs",
"variable" : [
"cb",
"u5c",
"u5d",
"o5c",
"o5d",
"obs"
]
}
]
}
]
}
]
}
]
}
]
}
]
},
{
"name" : "afp",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "cb",
"condition" : "linkId = 'afp-poliomyelitis'"
}
],
"rule" : [
{
"name" : "u5c",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "u5c",
"condition" : "linkId = 'afp-poliomyelitis-under5-cases'"
}
],
"rule" : [
{
"name" : "u5d",
"source" : [
{
"context" : "page",
"element" : "item",
"variable" : "u5d",
"condition" : "linkId = 'afp-poliomyelitis-under5-deaths'"
}
],
"rule" : [
{
"name" : "o5c",
"source" : [
{
"context" : "page",
"element" : "item",
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