0.1.0 - ci-build
HIVFHIRIG, published by intellisoftkenya. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/IntelliSOFT-Consulting/HIV-FHIR-IG/ and changes regularly. See the Directory of published versions
| Draft as of 2024-09-18 |
<StructureMap xmlns="http://hl7.org/fhir">
<id value="HIVObservationHIVCondition"/>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: StructureMap HIVObservationHIVCondition</b></p><a name="HIVObservationHIVCondition"> </a><a name="hcHIVObservationHIVCondition"> </a><a name="HIVObservationHIVCondition-en-US"> </a><pre class="fml">
<b>map</b><span style="color: navy"> "</span>https://IntelliSOFT-Consulting.github.io/HIV-FHIR-IG/StructureMap/HIVObservationHIVCondition<span style="color: navy">" = "</span>HIVObservationHIVCondition<span style="color: navy">"
</span><span style="color: navy">// </span><span style="color: green">declare the structure defs used</span>
<b>uses</b><span style="color: navy"> "</span><a href="http://hl7.org/fhir/R4/bundle.html" title="Bundle">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style="color: navy">" </span><b>alias </b>input <b>as </b><b>source</b>
<b>uses</b><span style="color: navy"> "</span><a href="http://hl7.org/fhir/R4/bundle.html" title="Bundle">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style="color: navy">" </span><b>alias </b>output <b>as </b><b>target</b>
<span style="color: navy">// </span><span style="color: green">declare group with local vars (src, tgt) and their aliases</span>
<span style="color: navy">// </span><span style="color: green">anything ending with semicolon is a rule</span>
<b>group </b>HIVObservationHIVCondition<span style="color: navy">(</span><b>source</b> <span style="color: maroon">src</span><span style="color: navy"> : </span>input, <b>target</b> <span style="color: maroon">tgt</span><span style="color: navy"> : </span>output<span style="color: navy">)</span><span style="color: navy"> {
</span> <span style="color: navy">// </span><span style="color: green">set bundle type for the output bundle</span>
src<span style="color: navy"><b> -> </b></span>tgt.type = <span style="color: blue">'transaction'</span> <i>"setBundleType"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">loop through patients in input bundle</span>
src.entry<b> as </b><span style="color: maroon">entry</span><span style="color: navy"><b> -> </b></span>tgt.entry<b> as </b><span style="color: maroon">tentry</span><b> then</b><span style="color: navy"> {
</span> entry.resource<span style="color: navy"> : </span>Patient<b> as </b><span style="color: maroon">patient</span><span style="color: navy"><b> -> </b></span> tentry.resource = <span style="color: maroon">patient</span><span style="color: navy">, </span> tentry.request<b> as </b><span style="color: maroon">newrequest</span><b> then</b><span style="color: navy"> {
</span> entry<span style="color: navy"><b> -> </b></span>tentry.fullUrl = <span style="color: navy">(</span>'urn:uuid:' & patient.id<span style="color: navy">)</span> <i>"setFullUrl"</i><span style="color: navy">;</span>
entry<span style="color: navy"><b> -> </b></span> newrequest.method = <span style="color: blue">'PUT'</span><span style="color: navy">, </span> newrequest.url = <span style="color: navy">(</span>'Patient/' & patient.id<span style="color: navy">)</span> <i>"setPatientRequest"</i><span style="color: navy">;</span>
entry<span style="color: navy"><b> -> </b></span> tgt.entry<b> as </b><span style="color: maroon">pentry</span><span style="color: navy">, </span> pentry.resource = <b>create</b><span style="color: navy">(</span><span style="color: blue">'Provenance'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">prov</span><span style="color: navy">, </span> <b>uuid</b><span style="color: navy">(</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">pid</span><span style="color: navy">, </span> pentry.request<b> as </b><span style="color: maroon">prequest</span><b> then</b><span style="color: navy"> {
</span> patient<span style="color: navy"><b> -> </b></span>prov.id = <span style="color: maroon">pid</span> <i>"setPId"</i><span style="color: navy">;</span>
patient<span style="color: navy"><b> -> </b></span>pentry.fullUrl = <span style="color: navy">(</span>'urn:uuid:' & pid<span style="color: navy">)</span> <i>"setFullUrl"</i><span style="color: navy">;</span>
patient<span style="color: navy"><b> -> </b></span> prequest.method = <span style="color: blue">'PUT'</span><span style="color: navy">, </span> prequest.url = <span style="color: navy">(</span>'Provenance/' & pid<span style="color: navy">)</span> <i>"setrequest"</i><span style="color: navy">;</span>
patient<span style="color: navy"><b> -> </b></span>prov.target<b> as </b><span style="color: maroon">ptarg</span><b> then</b><span style="color: navy"> {
</span> patient<span style="color: navy"><b> -> </b></span>ptarg.reference = <span style="color: navy">(</span>'urn:uuid:' & patient.id<span style="color: navy">)</span> <i>"setTargetRef"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setTarget"</i><span style="color: navy">;</span>
patient<span style="color: navy"><b> -> </b></span>prov.entity<b> as </b><span style="color: maroon">entity</span><b> then</b><span style="color: navy"> {
</span> patient<span style="color: navy"><b> -> </b></span>entity.role = <span style="color: blue">'source'</span> <i>"setRole"</i><span style="color: navy">;</span>
patient<span style="color: navy"><b> -> </b></span>entity.what<b> as </b><span style="color: maroon">pwhat</span><b> then </b>setProvenanceFromBundleId<span style="color: navy">(</span><span style="color: maroon">src</span><span style="color: navy">, </span><span style="color: maroon">pwhat</span><span style="color: navy">)</span> <i>"setWhatId"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setEntity"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setProvenance"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">for observations of that patient look for art program enrollment</span>
<span style="color: navy">// </span><span style="color: green">create a condition resource in output with uuid</span>
src.entry<b> as </b><span style="color: maroon">obsentry</span><b> where </b>resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '160540')))<span style="color: navy"><b> -> </b></span> tgt.entry<b> as </b><span style="color: maroon">newentry</span><span style="color: navy">, </span> newentry.resource = <b>create</b><span style="color: navy">(</span><span style="color: blue">'Condition'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">cond</span><span style="color: navy">, </span> <b>uuid</b><span style="color: navy">(</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">cid</span><b> then</b><span style="color: navy"> {
</span> obsentry.resource<b> as </b><span style="color: maroon">obs</span><span style="color: navy"><b> -> </b></span> newentry.fullUrl = <span style="color: navy">(</span>'urn:uuid:' & cid<span style="color: navy">)</span><span style="color: navy">, </span> newentry.request<b> as </b><span style="color: maroon">newrequest</span><b> then</b><span style="color: navy"> {
</span> obsentry<span style="color: navy"><b> -> </b></span>cond.id = <span style="color: maroon">cid</span> <i>"setCId"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">setrequest rule for resource in transaction bundle</span>
<span style="color: navy">// </span><span style="color: green">needs to be processed properly before putting on existing data on fhir server</span>
obsentry<span style="color: navy"><b> -> </b></span> newrequest.method = <span style="color: blue">'PUT'</span><span style="color: navy">, </span> newrequest.url = <span style="color: navy">(</span>'Condition/' & cid<span style="color: navy">)</span> <i>"setrequest"</i><span style="color: navy">;</span>
patient<span style="color: navy"><b> -> </b></span>cond.subject<b> as </b><span style="color: maroon">subject</span><b> then</b><span style="color: navy"> {
</span> patient<span style="color: navy"><b> -> </b></span>subject.reference = <b>reference</b><span style="color: navy">(</span><span style="color: maroon">patient</span><span style="color: navy">)</span> <i>"setSubjectRef"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setSubject"</i><span style="color: navy">;</span>
obs.effective<b> as </b><span style="color: maroon">effective</span><span style="color: navy"><b> -> </b></span>cond.onset = <span style="color: maroon">effective</span> <i>"setOnset"</i><span style="color: navy">;</span>
obsentry<span style="color: navy"><b> -> </b></span>cond.clinicalStatus = <b>cc</b><span style="color: navy">(</span><span style="color: blue">'http://terminology.hl7.org/CodeSystem/condition-clinical'</span><span style="color: navy">, </span><span style="color: blue">'active'</span><span style="color: navy">, </span><span style="color: blue">'Active'</span><span style="color: navy">)</span> <i>"setClinicalStatus"</i><span style="color: navy">;</span>
obsentry<span style="color: navy"><b> -> </b></span>cond.code = <b>cc</b><span style="color: navy">(</span><span style="color: blue">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style="color: navy">, </span><span style="color: blue">'HIV.B.DE116'</span><span style="color: navy">, </span><span style="color: blue">'HIV-positive'</span><span style="color: navy">)</span> <i>"setCode"</i><span style="color: navy">;</span>
obsentry<span style="color: navy"><b> -> </b></span>cond.category = <b>cc</b><span style="color: navy">(</span><span style="color: blue">'http://terminology.hl7.org/CodeSystem/condition-category'</span><span style="color: navy">, </span><span style="color: blue">'encounter-diagnosis'</span><span style="color: navy">, </span><span style="color: blue">'Encounter Diagnosis'</span><span style="color: navy">)</span> <i>"setCategory"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">create provenance resource to document input/output resources links</span>
obs<span style="color: navy"><b> -> </b></span> tgt.entry<b> as </b><span style="color: maroon">pentry</span><span style="color: navy">, </span> pentry.resource = <b>create</b><span style="color: navy">(</span><span style="color: blue">'Provenance'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">prov</span><span style="color: navy">, </span> <b>uuid</b><span style="color: navy">(</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">pid</span><span style="color: navy">, </span> pentry.request<b> as </b><span style="color: maroon">prequest</span><b> then</b><span style="color: navy"> {
</span> obs<span style="color: navy"><b> -> </b></span>prov.id = <span style="color: maroon">pid</span> <i>"setPId"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>pentry.fullUrl = <span style="color: navy">(</span>'urn:uuid:' & pid<span style="color: navy">)</span> <i>"setFullUrl"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span> prequest.method = <span style="color: blue">'PUT'</span><span style="color: navy">, </span> prequest.url = <span style="color: navy">(</span>'Provenance/' & pid<span style="color: navy">)</span> <i>"setrequest"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>prov.target<b> as </b><span style="color: maroon">ptarg</span><b> then</b><span style="color: navy"> {
</span> obs<span style="color: navy"><b> -> </b></span>ptarg.reference = <span style="color: navy">(</span>'urn:uuid:' & cid<span style="color: navy">)</span> <i>"setTargetRef"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setTarget"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>prov.entity<b> as </b><span style="color: maroon">entity</span><b> then</b><span style="color: navy"> {
</span> obs<span style="color: navy"><b> -> </b></span>entity.role = <span style="color: blue">'source'</span> <i>"setRole"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>entity.what<b> as </b><span style="color: maroon">pwhat</span><b> then </b>setProvenanceFromBundleId<span style="color: navy">(</span><span style="color: maroon">src</span><span style="color: navy">, </span><span style="color: maroon">pwhat</span><span style="color: navy">)</span> <i>"setWhatId"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setEntity"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setProvenance"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setCondition"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"getOnARTObservation"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">for observations of that patient look for return visit date</span>
<span style="color: navy">// </span><span style="color: green">create a medication request resource in output with uuid</span>
src.entry<b> as </b><span style="color: maroon">obsentry</span><b> where </b>resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '5096')))<span style="color: navy"><b> -> </b></span> tgt.entry<b> as </b><span style="color: maroon">newentry</span><span style="color: navy">, </span> newentry.resource = <b>create</b><span style="color: navy">(</span><span style="color: blue">'MedicationStatement'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">ms</span><span style="color: navy">, </span> <b>uuid</b><span style="color: navy">(</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">msid</span><b> then</b><span style="color: navy"> {
</span> obsentry.resource<b> as </b><span style="color: maroon">obs</span><span style="color: navy"><b> -> </b></span> newentry.fullUrl = <span style="color: navy">(</span>'urn:uuid:' & msid<span style="color: navy">)</span><span style="color: navy">, </span> newentry.request<b> as </b><span style="color: maroon">newrequest</span><b> then</b><span style="color: navy"> {
</span> obsentry<span style="color: navy"><b> -> </b></span>ms.id = <span style="color: maroon">msid</span> <i>"setMSId"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">setrequest rule for resource in transaction bundle</span>
<span style="color: navy">// </span><span style="color: green">needs to be processed properly before putting on existing data on fhir server</span>
obsentry<span style="color: navy"><b> -> </b></span> newrequest.method = <span style="color: blue">'PUT'</span><span style="color: navy">, </span> newrequest.url = <span style="color: navy">(</span>'MedicationStatement/' & msid<span style="color: navy">)</span> <i>"setrequest"</i><span style="color: navy">;</span>
patient<span style="color: navy"><b> -> </b></span>ms.subject<b> as </b><span style="color: maroon">subject</span><b> then</b><span style="color: navy"> {
</span> patient<span style="color: navy"><b> -> </b></span>subject.reference = <b>reference</b><span style="color: navy">(</span><span style="color: maroon">patient</span><span style="color: navy">)</span> <i>"setSubjectRef"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setSubject"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">obs.effective as effective -> ms.effective = effective "setEffective";</span>
obs.effective<span style="color: navy"> : </span>dateTime<b> as </b><span style="color: maroon">effective</span><span style="color: navy"><b> -> </b></span>ms.effective = <b>create</b><span style="color: navy">(</span><span style="color: blue">'Period'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">mseffective</span><b> then</b><span style="color: navy"> {
</span> effective<span style="color: navy"><b> -> </b></span>mseffective.start = <span style="color: maroon">effective</span> <i>"setEffectiveStart"</i><span style="color: navy">;</span>
effective<span style="color: navy"><b> -> </b></span>mseffective.end = <span style="color: navy">(</span>%effective + 30 'days'<span style="color: navy">)</span> <i>"setEffectiveEnd"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setEffective"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">not correct in hiv l3</span>
obsentry<span style="color: navy"><b> -> </b></span>ms.status = <span style="color: blue">'active'</span> <i>"setStatus"</i><span style="color: navy">;</span>
obsentry<span style="color: navy"><b> -> </b></span>ms.reasonCode = <b>cc</b><span style="color: navy">(</span><span style="color: blue">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style="color: navy">, </span><span style="color: blue">'HIV.H.DE47'</span><span style="color: navy">, </span><span style="color: blue">'On ART'</span><span style="color: navy">)</span> <i>"setMSReasonCode"</i><span style="color: navy">;</span>
obsentry<span style="color: navy"><b> -> </b></span>ms.medication = <b>create</b><span style="color: navy">(</span><span style="color: blue">'CodeableConcept'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">medication</span><b> then</b><span style="color: navy"> {
</span> obsentry<span style="color: navy"><b> -> </b></span>medication.coding<b> as </b><span style="color: maroon">coding</span><b> then</b><span style="color: navy"> {
</span> obsentry<span style="color: navy"><b> -> </b></span> coding.code = <span style="color: blue">'160119'</span><span style="color: navy">, </span> coding.display = <span style="color: blue">'CURRENTLY TAKING ARV'</span><span style="color: navy">, </span> coding.system = <span style="color: blue">'https://cielterminology.org'</span> <i>"setMSCoding"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setMSCoding"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"SetMSMedication"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">create provenance resource to document input/output resources links</span>
obs<span style="color: navy"><b> -> </b></span> tgt.entry<b> as </b><span style="color: maroon">pentry</span><span style="color: navy">, </span> pentry.resource = <b>create</b><span style="color: navy">(</span><span style="color: blue">'Provenance'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">prov</span><span style="color: navy">, </span> <b>uuid</b><span style="color: navy">(</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">pid</span><span style="color: navy">, </span> pentry.request<b> as </b><span style="color: maroon">prequest</span><b> then</b><span style="color: navy"> {
</span> obs<span style="color: navy"><b> -> </b></span>prov.id = <span style="color: maroon">pid</span> <i>"setPId"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>pentry.fullUrl = <span style="color: navy">(</span>'urn:uuid:' & pid<span style="color: navy">)</span> <i>"setFullUrl"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span> prequest.method = <span style="color: blue">'PUT'</span><span style="color: navy">, </span> prequest.url = <span style="color: navy">(</span>'Provenance/' & pid<span style="color: navy">)</span> <i>"setrequest"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>prov.target<b> as </b><span style="color: maroon">ptarg</span><b> then</b><span style="color: navy"> {
</span> obs<span style="color: navy"><b> -> </b></span>ptarg.reference = <span style="color: navy">(</span>'urn:uuid:' & msid<span style="color: navy">)</span> <i>"setTargetRef"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setTarget"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>prov.entity<b> as </b><span style="color: maroon">entity</span><b> then</b><span style="color: navy"> {
</span> obs<span style="color: navy"><b> -> </b></span>entity.role = <span style="color: blue">'source'</span> <i>"setRole"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>entity.what<b> as </b><span style="color: maroon">pwhat</span><b> then </b>setProvenanceFromBundleId<span style="color: navy">(</span><span style="color: maroon">src</span><span style="color: navy">, </span><span style="color: maroon">pwhat</span><span style="color: navy">)</span> <i>"setWhatId"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setEntity"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setProvenance"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setMedicationStatement"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"getVisitObservation"</i><span style="color: navy">;</span>
<span style="color: navy">// </span><span style="color: green">create observation resource with the positive hiv test codes</span>
<span style="color: navy">// </span><span style="color: green">this will have to be one for hiv positive and one for hiv negative</span>
src.entry<b> as </b><span style="color: maroon">obsentry</span><b> where </b>resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '159427')))<span style="color: navy"><b> -> </b></span> tgt.entry<b> as </b><span style="color: maroon">newentry</span><span style="color: navy">, </span> newentry.resource = <b>create</b><span style="color: navy">(</span><span style="color: blue">'Observation'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">observe</span><span style="color: navy">, </span> <b>uuid</b><span style="color: navy">(</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">obsd</span><b> then</b><span style="color: navy"> {
</span> obsentry.resource<b> as </b><span style="color: maroon">obs</span><span style="color: navy"><b> -> </b></span> newentry.fullUrl = <span style="color: navy">(</span>'urn:uuid:' & obsd<span style="color: navy">)</span><span style="color: navy">, </span> newentry.request<b> as </b><span style="color: maroon">newrequest</span><b> then</b><span style="color: navy"> {
</span> obsentry<span style="color: navy"><b> -> </b></span>observe.id = <span style="color: maroon">obsd</span> <i>"setOBSd"</i><span style="color: navy">;</span>
obsentry<span style="color: navy"><b> -> </b></span> newrequest.method = <span style="color: blue">'PUT'</span><span style="color: navy">, </span> newrequest.url = <span style="color: navy">(</span>'Observation/' & obsd<span style="color: navy">)</span> <i>"setrequest"</i><span style="color: navy">;</span>
patient<span style="color: navy"><b> -> </b></span>observe.subject<b> as </b><span style="color: maroon">subject</span><b> then</b><span style="color: navy"> {
</span> patient<span style="color: navy"><b> -> </b></span>subject.reference = <b>reference</b><span style="color: navy">(</span><span style="color: maroon">patient</span><span style="color: navy">)</span> <i>"setSubjectRef"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setSubject"</i><span style="color: navy">;</span>
obs.effective<b> as </b><span style="color: maroon">effective</span><span style="color: navy"><b> -> </b></span>observe.effective = <span style="color: maroon">effective</span> <i>"setOnset"</i><span style="color: navy">;</span>
obs.code<b> as </b><span style="color: maroon">code</span><span style="color: navy"><b> -> </b></span>observe.code = <span style="color: maroon">code</span> <i>"setCode"</i><span style="color: navy">;</span>
obs.value<span style="color: navy"> : </span>CodeableConcept<b> as </b><span style="color: maroon">value</span><b> where </b>coding.exists((system = 'https://cielterminology.org') and (code = '664'))<span style="color: navy"><b> -> </b></span>observe.value = <b>create</b><span style="color: navy">(</span><span style="color: blue">'CodeableConcept'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">val</span><b> then</b><span style="color: navy"> {
</span> value<span style="color: navy"><b> -> </b></span>val.coding<b> as </b><span style="color: maroon">coding</span><b> then</b><span style="color: navy"> {
</span> value<span style="color: navy"><b> -> </b></span> coding.system = <span style="color: blue">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style="color: navy">, </span> coding.code = <span style="color: blue">'HIV.B.DE117'</span><span style="color: navy">, </span> coding.display = <span style="color: blue">'HIV-negative'</span> <i>"setNegativeCC"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setNegativeCoding"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setValueNegative"</i><span style="color: navy">;</span>
obs.value<span style="color: navy"> : </span>CodeableConcept<b> as </b><span style="color: maroon">value</span><b> where </b>coding.exists((system = 'https://cielterminology.org') and (code = '138571'))<span style="color: navy"><b> -> </b></span>observe.value = <b>create</b><span style="color: navy">(</span><span style="color: blue">'CodeableConcept'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">val</span><b> then</b><span style="color: navy"> {
</span> value<span style="color: navy"><b> -> </b></span>val.coding<b> as </b><span style="color: maroon">coding</span><b> then</b><span style="color: navy"> {
</span> value<span style="color: navy"><b> -> </b></span> coding.system = <span style="color: blue">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style="color: navy">, </span> coding.code = <span style="color: blue">'HIV.B.DE116'</span><span style="color: navy">, </span> coding.display = <span style="color: blue">'HIV-positive'</span> <i>"setPositiveCC"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setPositiveCoding"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setValuePositive1"</i><span style="color: navy">;</span>
obs.value<span style="color: navy"> : </span>CodeableConcept<b> as </b><span style="color: maroon">value</span><b> where </b>coding.exists((system = 'https://cielterminology.org') and (code = '703'))<span style="color: navy"><b> -> </b></span>observe.value = <b>create</b><span style="color: navy">(</span><span style="color: blue">'CodeableConcept'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">val</span><b> then</b><span style="color: navy"> {
</span> value<span style="color: navy"><b> -> </b></span>val.coding<b> as </b><span style="color: maroon">coding</span><b> then</b><span style="color: navy"> {
</span> value<span style="color: navy"><b> -> </b></span> coding.system = <span style="color: blue">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style="color: navy">, </span> coding.code = <span style="color: blue">'HIV.B.DE116'</span><span style="color: navy">, </span> coding.display = <span style="color: blue">'HIV-positive'</span> <i>"setPositiveCC"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setPositiveCoding"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setValuePositive2"</i><span style="color: navy">;</span>
obsentry<span style="color: navy"><b> -> </b></span>observe.status = <b>cc</b><span style="color: navy">(</span><span style="color: blue">'http://hl7.org/fhir/observation-status'</span><span style="color: navy">, </span><span style="color: blue">'final'</span><span style="color: navy">, </span><span style="color: blue">'Final'</span><span style="color: navy">)</span> <i>"setStatus"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span> tgt.entry<b> as </b><span style="color: maroon">pentry</span><span style="color: navy">, </span> pentry.resource = <b>create</b><span style="color: navy">(</span><span style="color: blue">'Provenance'</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">prov</span><span style="color: navy">, </span> <b>uuid</b><span style="color: navy">(</span><span style="color: navy">)</span><b> as </b><span style="color: maroon">pid</span><span style="color: navy">, </span> pentry.request<b> as </b><span style="color: maroon">prequest</span><b> then</b><span style="color: navy"> {
</span> obs<span style="color: navy"><b> -> </b></span>prov.id = <span style="color: maroon">pid</span> <i>"setPId"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>pentry.fullUrl = <span style="color: navy">(</span>'urn:uuid:' & pid<span style="color: navy">)</span> <i>"setFullUrl"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span> prequest.method = <span style="color: blue">'PUT'</span><span style="color: navy">, </span> prequest.url = <span style="color: navy">(</span>'Provenance/' & pid<span style="color: navy">)</span> <i>"setrequest"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>prov.target<b> as </b><span style="color: maroon">ptarg</span><b> then</b><span style="color: navy"> {
</span> obs<span style="color: navy"><b> -> </b></span>ptarg.reference = <span style="color: navy">(</span>'urn:uuid:' & cid<span style="color: navy">)</span> <i>"setTargetRef"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setTarget"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>prov.entity<b> as </b><span style="color: maroon">entity</span><b> then</b><span style="color: navy"> {
</span> obs<span style="color: navy"><b> -> </b></span>entity.role = <span style="color: blue">'source'</span> <i>"setRole"</i><span style="color: navy">;</span>
obs<span style="color: navy"><b> -> </b></span>entity.what<b> as </b><span style="color: maroon">pwhat</span><b> then </b>setProvenanceFromBundleId<span style="color: navy">(</span><span style="color: maroon">src</span><span style="color: navy">, </span><span style="color: maroon">pwhat</span><span style="color: navy">)</span> <i>"setWhatId"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setEntity"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setProvenance"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setHIVPositiveTest"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"getOnARTObservation"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"patientResource"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"copyPatient"</i><span style="color: navy">;</span>
<span style="color: navy">}
</span><b>group </b>setProvenanceFromBundleId<span style="color: navy">(</span><b>source</b> <span style="color: maroon">bundle</span><span style="color: navy"> : </span>input, <b>target</b> <span style="color: maroon">provwhat</span><span style="color: navy"> : </span>Reference<span style="color: navy">)</span><span style="color: navy"> {
</span> bundle.id<b> as </b><span style="color: maroon">bundleid</span><span style="color: navy"><b> -> </b></span>provwhat.identifier<b> as </b><span style="color: maroon">whatid</span><b> then</b><span style="color: navy"> {
</span> bundleid<span style="color: navy"><b> -> </b></span>whatid.value = <span style="color: navy">(</span>'Bundle/' & bundleid<span style="color: navy">)</span> <i>"setWhatIdValue"</i><span style="color: navy">;</span>
<span style="color: navy">}</span> <i>"setWhatId"</i><span style="color: navy">;</span>
<span style="color: navy">}
</span></pre></div>
</text>
<url
value="https://IntelliSOFT-Consulting.github.io/HIV-FHIR-IG/StructureMap/HIVObservationHIVCondition"/>
<version value="0.1.0"/>
<name value="HIVObservationHIVCondition"/>
<status value="draft"/>
<date value="2024-09-18T19:24:24+00:00"/>
<publisher value="intellisoftkenya"/>
<contact>
<name value="intellisoftkenya"/>
<telecom>
<system value="url"/>
<value value="https://www.intellisoftkenya.com/"/>
</telecom>
</contact>
<description value="declare the structure defs used"/>
<structure>
<url value="http://hl7.org/fhir/StructureDefinition/Bundle"/>
<mode value="source"/>
<alias value="input"/>
</structure>
<structure>
<url value="http://hl7.org/fhir/StructureDefinition/Bundle"/>
<mode value="target"/>
<alias value="output"/>
</structure>
<group>
<name value="HIVObservationHIVCondition"/>
<typeMode value="none"/>
<documentation
value="declare group with local vars (src, tgt) and their aliases
anything ending with semicolon is a rule"/>
<input>
<name value="src"/>
<type value="input"/>
<mode value="source"/>
</input>
<input>
<name value="tgt"/>
<type value="output"/>
<mode value="target"/>
</input>
<rule>
<name value="setBundleType"/>
<source>
<context value="src"/>
</source>
<target>
<context value="tgt"/>
<contextType value="variable"/>
<element value="type"/>
<transform value="copy"/>
<parameter>
<valueString value="transaction"/>
</parameter>
</target>
</rule>
<rule>
<name value="copyPatient"/>
<source>
<context value="src"/>
<element value="entry"/>
<variable value="entry"/>
</source>
<target>
<context value="tgt"/>
<contextType value="variable"/>
<element value="entry"/>
<variable value="tentry"/>
</target>
<rule>
<name value="patientResource"/>
<source>
<context value="entry"/>
<type value="Patient"/>
<element value="resource"/>
<variable value="patient"/>
</source>
<target>
<context value="tentry"/>
<contextType value="variable"/>
<element value="resource"/>
<transform value="copy"/>
<parameter>
<valueId value="patient"/>
</parameter>
</target>
<target>
<context value="tentry"/>
<contextType value="variable"/>
<element value="request"/>
<variable value="newrequest"/>
</target>
<rule>
<name value="setFullUrl"/>
<source>
<context value="entry"/>
</source>
<target>
<context value="tentry"/>
<contextType value="variable"/>
<element value="fullUrl"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & patient.id"/>
</parameter>
</target>
</rule>
<rule>
<name value="setPatientRequest"/>
<source>
<context value="entry"/>
</source>
<target>
<context value="newrequest"/>
<contextType value="variable"/>
<element value="method"/>
<transform value="copy"/>
<parameter>
<valueString value="PUT"/>
</parameter>
</target>
<target>
<context value="newrequest"/>
<contextType value="variable"/>
<element value="url"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'Patient/' & patient.id"/>
</parameter>
</target>
</rule>
<rule>
<name value="setProvenance"/>
<source>
<context value="entry"/>
</source>
<target>
<context value="tgt"/>
<contextType value="variable"/>
<element value="entry"/>
<variable value="pentry"/>
</target>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="resource"/>
<variable value="prov"/>
<transform value="create"/>
<parameter>
<valueString value="Provenance"/>
</parameter>
</target>
<target>
<contextType value="variable"/>
<variable value="pid"/>
<transform value="uuid"/>
</target>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="request"/>
<variable value="prequest"/>
</target>
<rule>
<name value="setPId"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="id"/>
<transform value="copy"/>
<parameter>
<valueId value="pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setFullUrl"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="fullUrl"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setrequest"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="prequest"/>
<contextType value="variable"/>
<element value="method"/>
<transform value="copy"/>
<parameter>
<valueString value="PUT"/>
</parameter>
</target>
<target>
<context value="prequest"/>
<contextType value="variable"/>
<element value="url"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'Provenance/' & pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setTarget"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="target"/>
<variable value="ptarg"/>
</target>
<rule>
<name value="setTargetRef"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="ptarg"/>
<contextType value="variable"/>
<element value="reference"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & patient.id"/>
</parameter>
</target>
</rule>
</rule>
<rule>
<name value="setEntity"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="entity"/>
<variable value="entity"/>
</target>
<rule>
<name value="setRole"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="entity"/>
<contextType value="variable"/>
<element value="role"/>
<transform value="copy"/>
<parameter>
<valueString value="source"/>
</parameter>
</target>
</rule>
<rule>
<name value="setWhatId"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="entity"/>
<contextType value="variable"/>
<element value="what"/>
<variable value="pwhat"/>
</target>
<dependent>
<name value="setProvenanceFromBundleId"/>
<variable value="src"/>
<variable value="pwhat"/>
</dependent>
</rule>
</rule>
</rule>
<rule>
<name value="getOnARTObservation"/>
<source>
<context value="src"/>
<element value="entry"/>
<variable value="obsentry"/>
<condition
value="resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '160540')))"/>
</source>
<target>
<context value="tgt"/>
<contextType value="variable"/>
<element value="entry"/>
<variable value="newentry"/>
</target>
<target>
<context value="newentry"/>
<contextType value="variable"/>
<element value="resource"/>
<variable value="cond"/>
<transform value="create"/>
<parameter>
<valueString value="Condition"/>
</parameter>
</target>
<target>
<contextType value="variable"/>
<variable value="cid"/>
<transform value="uuid"/>
</target>
<rule>
<name value="setCondition"/>
<source>
<context value="obsentry"/>
<element value="resource"/>
<variable value="obs"/>
</source>
<target>
<context value="newentry"/>
<contextType value="variable"/>
<element value="fullUrl"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & cid"/>
</parameter>
</target>
<target>
<context value="newentry"/>
<contextType value="variable"/>
<element value="request"/>
<variable value="newrequest"/>
</target>
<rule>
<name value="setCId"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="cond"/>
<contextType value="variable"/>
<element value="id"/>
<transform value="copy"/>
<parameter>
<valueId value="cid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setrequest"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="newrequest"/>
<contextType value="variable"/>
<element value="method"/>
<transform value="copy"/>
<parameter>
<valueString value="PUT"/>
</parameter>
</target>
<target>
<context value="newrequest"/>
<contextType value="variable"/>
<element value="url"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'Condition/' & cid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setSubject"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="cond"/>
<contextType value="variable"/>
<element value="subject"/>
<variable value="subject"/>
</target>
<rule>
<name value="setSubjectRef"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="subject"/>
<contextType value="variable"/>
<element value="reference"/>
<transform value="reference"/>
<parameter>
<valueId value="patient"/>
</parameter>
</target>
</rule>
</rule>
<rule>
<name value="setOnset"/>
<source>
<context value="obs"/>
<element value="effective"/>
<variable value="effective"/>
</source>
<target>
<context value="cond"/>
<contextType value="variable"/>
<element value="onset"/>
<transform value="copy"/>
<parameter>
<valueId value="effective"/>
</parameter>
</target>
</rule>
<rule>
<name value="setClinicalStatus"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="cond"/>
<contextType value="variable"/>
<element value="clinicalStatus"/>
<transform value="cc"/>
<parameter>
<valueString
value="http://terminology.hl7.org/CodeSystem/condition-clinical"/>
</parameter>
<parameter>
<valueString value="active"/>
</parameter>
<parameter>
<valueString value="Active"/>
</parameter>
</target>
</rule>
<rule>
<name value="setCode"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="cond"/>
<contextType value="variable"/>
<element value="code"/>
<transform value="cc"/>
<parameter>
<valueString
value="http://smart.who.int/hiv/CodeSystem/HIVConcepts"/>
</parameter>
<parameter>
<valueString value="HIV.B.DE116"/>
</parameter>
<parameter>
<valueString value="HIV-positive"/>
</parameter>
</target>
</rule>
<rule>
<name value="setCategory"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="cond"/>
<contextType value="variable"/>
<element value="category"/>
<transform value="cc"/>
<parameter>
<valueString
value="http://terminology.hl7.org/CodeSystem/condition-category"/>
</parameter>
<parameter>
<valueString value="encounter-diagnosis"/>
</parameter>
<parameter>
<valueString value="Encounter Diagnosis"/>
</parameter>
</target>
</rule>
<rule>
<name value="setProvenance"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="tgt"/>
<contextType value="variable"/>
<element value="entry"/>
<variable value="pentry"/>
</target>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="resource"/>
<variable value="prov"/>
<transform value="create"/>
<parameter>
<valueString value="Provenance"/>
</parameter>
</target>
<target>
<contextType value="variable"/>
<variable value="pid"/>
<transform value="uuid"/>
</target>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="request"/>
<variable value="prequest"/>
</target>
<rule>
<name value="setPId"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="id"/>
<transform value="copy"/>
<parameter>
<valueId value="pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setFullUrl"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="fullUrl"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setrequest"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prequest"/>
<contextType value="variable"/>
<element value="method"/>
<transform value="copy"/>
<parameter>
<valueString value="PUT"/>
</parameter>
</target>
<target>
<context value="prequest"/>
<contextType value="variable"/>
<element value="url"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'Provenance/' & pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setTarget"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="target"/>
<variable value="ptarg"/>
</target>
<rule>
<name value="setTargetRef"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="ptarg"/>
<contextType value="variable"/>
<element value="reference"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & cid"/>
</parameter>
</target>
</rule>
</rule>
<rule>
<name value="setEntity"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="entity"/>
<variable value="entity"/>
</target>
<rule>
<name value="setRole"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="entity"/>
<contextType value="variable"/>
<element value="role"/>
<transform value="copy"/>
<parameter>
<valueString value="source"/>
</parameter>
</target>
</rule>
<rule>
<name value="setWhatId"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="entity"/>
<contextType value="variable"/>
<element value="what"/>
<variable value="pwhat"/>
</target>
<dependent>
<name value="setProvenanceFromBundleId"/>
<variable value="src"/>
<variable value="pwhat"/>
</dependent>
</rule>
</rule>
</rule>
</rule>
</rule>
<rule>
<name value="getVisitObservation"/>
<source>
<context value="src"/>
<element value="entry"/>
<variable value="obsentry"/>
<condition
value="resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '5096')))"/>
</source>
<target>
<context value="tgt"/>
<contextType value="variable"/>
<element value="entry"/>
<variable value="newentry"/>
</target>
<target>
<context value="newentry"/>
<contextType value="variable"/>
<element value="resource"/>
<variable value="ms"/>
<transform value="create"/>
<parameter>
<valueString value="MedicationStatement"/>
</parameter>
</target>
<target>
<contextType value="variable"/>
<variable value="msid"/>
<transform value="uuid"/>
</target>
<rule>
<name value="setMedicationStatement"/>
<source>
<context value="obsentry"/>
<element value="resource"/>
<variable value="obs"/>
</source>
<target>
<context value="newentry"/>
<contextType value="variable"/>
<element value="fullUrl"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & msid"/>
</parameter>
</target>
<target>
<context value="newentry"/>
<contextType value="variable"/>
<element value="request"/>
<variable value="newrequest"/>
</target>
<rule>
<name value="setMSId"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="ms"/>
<contextType value="variable"/>
<element value="id"/>
<transform value="copy"/>
<parameter>
<valueId value="msid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setrequest"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="newrequest"/>
<contextType value="variable"/>
<element value="method"/>
<transform value="copy"/>
<parameter>
<valueString value="PUT"/>
</parameter>
</target>
<target>
<context value="newrequest"/>
<contextType value="variable"/>
<element value="url"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'MedicationStatement/' & msid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setSubject"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="ms"/>
<contextType value="variable"/>
<element value="subject"/>
<variable value="subject"/>
</target>
<rule>
<name value="setSubjectRef"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="subject"/>
<contextType value="variable"/>
<element value="reference"/>
<transform value="reference"/>
<parameter>
<valueId value="patient"/>
</parameter>
</target>
</rule>
</rule>
<rule>
<name value="setEffective"/>
<source>
<context value="obs"/>
<type value="dateTime"/>
<element value="effective"/>
<variable value="effective"/>
</source>
<target>
<context value="ms"/>
<contextType value="variable"/>
<element value="effective"/>
<variable value="mseffective"/>
<transform value="create"/>
<parameter>
<valueString value="Period"/>
</parameter>
</target>
<rule>
<name value="setEffectiveStart"/>
<source>
<context value="effective"/>
</source>
<target>
<context value="mseffective"/>
<contextType value="variable"/>
<element value="start"/>
<transform value="copy"/>
<parameter>
<valueId value="effective"/>
</parameter>
</target>
</rule>
<rule>
<name value="setEffectiveEnd"/>
<source>
<context value="effective"/>
</source>
<target>
<context value="mseffective"/>
<contextType value="variable"/>
<element value="end"/>
<transform value="evaluate"/>
<parameter>
<valueString value="%effective + 30 'days'"/>
</parameter>
</target>
</rule>
</rule>
<rule>
<name value="setStatus"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="ms"/>
<contextType value="variable"/>
<element value="status"/>
<transform value="copy"/>
<parameter>
<valueString value="active"/>
</parameter>
</target>
</rule>
<rule>
<name value="setMSReasonCode"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="ms"/>
<contextType value="variable"/>
<element value="reasonCode"/>
<transform value="cc"/>
<parameter>
<valueString
value="http://smart.who.int/hiv/CodeSystem/HIVConcepts"/>
</parameter>
<parameter>
<valueString value="HIV.H.DE47"/>
</parameter>
<parameter>
<valueString value="On ART"/>
</parameter>
</target>
</rule>
<rule>
<name value="SetMSMedication"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="ms"/>
<contextType value="variable"/>
<element value="medication"/>
<variable value="medication"/>
<transform value="create"/>
<parameter>
<valueString value="CodeableConcept"/>
</parameter>
</target>
<rule>
<name value="setMSCoding"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="medication"/>
<contextType value="variable"/>
<element value="coding"/>
<variable value="coding"/>
</target>
<rule>
<name value="setMSCoding"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="code"/>
<transform value="copy"/>
<parameter>
<valueString value="160119"/>
</parameter>
</target>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="display"/>
<transform value="copy"/>
<parameter>
<valueString value="CURRENTLY TAKING ARV"/>
</parameter>
</target>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="system"/>
<transform value="copy"/>
<parameter>
<valueString value="https://cielterminology.org"/>
</parameter>
</target>
</rule>
</rule>
</rule>
<rule>
<name value="setProvenance"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="tgt"/>
<contextType value="variable"/>
<element value="entry"/>
<variable value="pentry"/>
</target>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="resource"/>
<variable value="prov"/>
<transform value="create"/>
<parameter>
<valueString value="Provenance"/>
</parameter>
</target>
<target>
<contextType value="variable"/>
<variable value="pid"/>
<transform value="uuid"/>
</target>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="request"/>
<variable value="prequest"/>
</target>
<rule>
<name value="setPId"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="id"/>
<transform value="copy"/>
<parameter>
<valueId value="pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setFullUrl"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="fullUrl"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setrequest"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prequest"/>
<contextType value="variable"/>
<element value="method"/>
<transform value="copy"/>
<parameter>
<valueString value="PUT"/>
</parameter>
</target>
<target>
<context value="prequest"/>
<contextType value="variable"/>
<element value="url"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'Provenance/' & pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setTarget"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="target"/>
<variable value="ptarg"/>
</target>
<rule>
<name value="setTargetRef"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="ptarg"/>
<contextType value="variable"/>
<element value="reference"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & msid"/>
</parameter>
</target>
</rule>
</rule>
<rule>
<name value="setEntity"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="entity"/>
<variable value="entity"/>
</target>
<rule>
<name value="setRole"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="entity"/>
<contextType value="variable"/>
<element value="role"/>
<transform value="copy"/>
<parameter>
<valueString value="source"/>
</parameter>
</target>
</rule>
<rule>
<name value="setWhatId"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="entity"/>
<contextType value="variable"/>
<element value="what"/>
<variable value="pwhat"/>
</target>
<dependent>
<name value="setProvenanceFromBundleId"/>
<variable value="src"/>
<variable value="pwhat"/>
</dependent>
</rule>
</rule>
</rule>
</rule>
</rule>
<rule>
<name value="getOnARTObservation"/>
<source>
<context value="src"/>
<element value="entry"/>
<variable value="obsentry"/>
<condition
value="resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '159427')))"/>
</source>
<target>
<context value="tgt"/>
<contextType value="variable"/>
<element value="entry"/>
<variable value="newentry"/>
</target>
<target>
<context value="newentry"/>
<contextType value="variable"/>
<element value="resource"/>
<variable value="observe"/>
<transform value="create"/>
<parameter>
<valueString value="Observation"/>
</parameter>
</target>
<target>
<contextType value="variable"/>
<variable value="obsd"/>
<transform value="uuid"/>
</target>
<rule>
<name value="setHIVPositiveTest"/>
<source>
<context value="obsentry"/>
<element value="resource"/>
<variable value="obs"/>
</source>
<target>
<context value="newentry"/>
<contextType value="variable"/>
<element value="fullUrl"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & obsd"/>
</parameter>
</target>
<target>
<context value="newentry"/>
<contextType value="variable"/>
<element value="request"/>
<variable value="newrequest"/>
</target>
<rule>
<name value="setOBSd"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="observe"/>
<contextType value="variable"/>
<element value="id"/>
<transform value="copy"/>
<parameter>
<valueId value="obsd"/>
</parameter>
</target>
</rule>
<rule>
<name value="setrequest"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="newrequest"/>
<contextType value="variable"/>
<element value="method"/>
<transform value="copy"/>
<parameter>
<valueString value="PUT"/>
</parameter>
</target>
<target>
<context value="newrequest"/>
<contextType value="variable"/>
<element value="url"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'Observation/' & obsd"/>
</parameter>
</target>
</rule>
<rule>
<name value="setSubject"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="observe"/>
<contextType value="variable"/>
<element value="subject"/>
<variable value="subject"/>
</target>
<rule>
<name value="setSubjectRef"/>
<source>
<context value="patient"/>
</source>
<target>
<context value="subject"/>
<contextType value="variable"/>
<element value="reference"/>
<transform value="reference"/>
<parameter>
<valueId value="patient"/>
</parameter>
</target>
</rule>
</rule>
<rule>
<name value="setOnset"/>
<source>
<context value="obs"/>
<element value="effective"/>
<variable value="effective"/>
</source>
<target>
<context value="observe"/>
<contextType value="variable"/>
<element value="effective"/>
<transform value="copy"/>
<parameter>
<valueId value="effective"/>
</parameter>
</target>
</rule>
<rule>
<name value="setCode"/>
<source>
<context value="obs"/>
<element value="code"/>
<variable value="code"/>
</source>
<target>
<context value="observe"/>
<contextType value="variable"/>
<element value="code"/>
<transform value="copy"/>
<parameter>
<valueId value="code"/>
</parameter>
</target>
</rule>
<rule>
<name value="setValueNegative"/>
<source>
<context value="obs"/>
<type value="CodeableConcept"/>
<element value="value"/>
<variable value="value"/>
<condition
value="coding.exists((system = 'https://cielterminology.org') and (code = '664'))"/>
</source>
<target>
<context value="observe"/>
<contextType value="variable"/>
<element value="value"/>
<variable value="val"/>
<transform value="create"/>
<parameter>
<valueString value="CodeableConcept"/>
</parameter>
</target>
<rule>
<name value="setNegativeCoding"/>
<source>
<context value="value"/>
</source>
<target>
<context value="val"/>
<contextType value="variable"/>
<element value="coding"/>
<variable value="coding"/>
</target>
<rule>
<name value="setNegativeCC"/>
<source>
<context value="value"/>
</source>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="system"/>
<transform value="copy"/>
<parameter>
<valueString
value="http://smart.who.int/hiv/CodeSystem/HIVConcepts"/>
</parameter>
</target>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="code"/>
<transform value="copy"/>
<parameter>
<valueString value="HIV.B.DE117"/>
</parameter>
</target>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="display"/>
<transform value="copy"/>
<parameter>
<valueString value="HIV-negative"/>
</parameter>
</target>
</rule>
</rule>
</rule>
<rule>
<name value="setValuePositive1"/>
<source>
<context value="obs"/>
<type value="CodeableConcept"/>
<element value="value"/>
<variable value="value"/>
<condition
value="coding.exists((system = 'https://cielterminology.org') and (code = '138571'))"/>
</source>
<target>
<context value="observe"/>
<contextType value="variable"/>
<element value="value"/>
<variable value="val"/>
<transform value="create"/>
<parameter>
<valueString value="CodeableConcept"/>
</parameter>
</target>
<rule>
<name value="setPositiveCoding"/>
<source>
<context value="value"/>
</source>
<target>
<context value="val"/>
<contextType value="variable"/>
<element value="coding"/>
<variable value="coding"/>
</target>
<rule>
<name value="setPositiveCC"/>
<source>
<context value="value"/>
</source>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="system"/>
<transform value="copy"/>
<parameter>
<valueString
value="http://smart.who.int/hiv/CodeSystem/HIVConcepts"/>
</parameter>
</target>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="code"/>
<transform value="copy"/>
<parameter>
<valueString value="HIV.B.DE116"/>
</parameter>
</target>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="display"/>
<transform value="copy"/>
<parameter>
<valueString value="HIV-positive"/>
</parameter>
</target>
</rule>
</rule>
</rule>
<rule>
<name value="setValuePositive2"/>
<source>
<context value="obs"/>
<type value="CodeableConcept"/>
<element value="value"/>
<variable value="value"/>
<condition
value="coding.exists((system = 'https://cielterminology.org') and (code = '703'))"/>
</source>
<target>
<context value="observe"/>
<contextType value="variable"/>
<element value="value"/>
<variable value="val"/>
<transform value="create"/>
<parameter>
<valueString value="CodeableConcept"/>
</parameter>
</target>
<rule>
<name value="setPositiveCoding"/>
<source>
<context value="value"/>
</source>
<target>
<context value="val"/>
<contextType value="variable"/>
<element value="coding"/>
<variable value="coding"/>
</target>
<rule>
<name value="setPositiveCC"/>
<source>
<context value="value"/>
</source>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="system"/>
<transform value="copy"/>
<parameter>
<valueString
value="http://smart.who.int/hiv/CodeSystem/HIVConcepts"/>
</parameter>
</target>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="code"/>
<transform value="copy"/>
<parameter>
<valueString value="HIV.B.DE116"/>
</parameter>
</target>
<target>
<context value="coding"/>
<contextType value="variable"/>
<element value="display"/>
<transform value="copy"/>
<parameter>
<valueString value="HIV-positive"/>
</parameter>
</target>
</rule>
</rule>
</rule>
<rule>
<name value="setStatus"/>
<source>
<context value="obsentry"/>
</source>
<target>
<context value="observe"/>
<contextType value="variable"/>
<element value="status"/>
<transform value="cc"/>
<parameter>
<valueString
value="http://hl7.org/fhir/observation-status"/>
</parameter>
<parameter>
<valueString value="final"/>
</parameter>
<parameter>
<valueString value="Final"/>
</parameter>
</target>
</rule>
<rule>
<name value="setProvenance"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="tgt"/>
<contextType value="variable"/>
<element value="entry"/>
<variable value="pentry"/>
</target>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="resource"/>
<variable value="prov"/>
<transform value="create"/>
<parameter>
<valueString value="Provenance"/>
</parameter>
</target>
<target>
<contextType value="variable"/>
<variable value="pid"/>
<transform value="uuid"/>
</target>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="request"/>
<variable value="prequest"/>
</target>
<rule>
<name value="setPId"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="id"/>
<transform value="copy"/>
<parameter>
<valueId value="pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setFullUrl"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="pentry"/>
<contextType value="variable"/>
<element value="fullUrl"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setrequest"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prequest"/>
<contextType value="variable"/>
<element value="method"/>
<transform value="copy"/>
<parameter>
<valueString value="PUT"/>
</parameter>
</target>
<target>
<context value="prequest"/>
<contextType value="variable"/>
<element value="url"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'Provenance/' & pid"/>
</parameter>
</target>
</rule>
<rule>
<name value="setTarget"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="target"/>
<variable value="ptarg"/>
</target>
<rule>
<name value="setTargetRef"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="ptarg"/>
<contextType value="variable"/>
<element value="reference"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'urn:uuid:' & cid"/>
</parameter>
</target>
</rule>
</rule>
<rule>
<name value="setEntity"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="prov"/>
<contextType value="variable"/>
<element value="entity"/>
<variable value="entity"/>
</target>
<rule>
<name value="setRole"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="entity"/>
<contextType value="variable"/>
<element value="role"/>
<transform value="copy"/>
<parameter>
<valueString value="source"/>
</parameter>
</target>
</rule>
<rule>
<name value="setWhatId"/>
<source>
<context value="obs"/>
</source>
<target>
<context value="entity"/>
<contextType value="variable"/>
<element value="what"/>
<variable value="pwhat"/>
</target>
<dependent>
<name value="setProvenanceFromBundleId"/>
<variable value="src"/>
<variable value="pwhat"/>
</dependent>
</rule>
</rule>
</rule>
</rule>
</rule>
</rule>
</rule>
</group>
<group>
<name value="setProvenanceFromBundleId"/>
<typeMode value="none"/>
<input>
<name value="bundle"/>
<type value="input"/>
<mode value="source"/>
</input>
<input>
<name value="provwhat"/>
<type value="Reference"/>
<mode value="target"/>
</input>
<rule>
<name value="setWhatId"/>
<source>
<context value="bundle"/>
<element value="id"/>
<variable value="bundleid"/>
</source>
<target>
<context value="provwhat"/>
<contextType value="variable"/>
<element value="identifier"/>
<variable value="whatid"/>
</target>
<rule>
<name value="setWhatIdValue"/>
<source>
<context value="bundleid"/>
</source>
<target>
<context value="whatid"/>
<contextType value="variable"/>
<element value="value"/>
<transform value="evaluate"/>
<parameter>
<valueString value="'Bundle/' & bundleid"/>
</parameter>
</target>
</rule>
</rule>
</group>
</StructureMap>