0.1.0 - ci-build
HIVFHIRIG, published by intellisoftkenya. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/IntelliSOFT-Consulting/HIV-FHIR-IG/ and changes regularly. See the Directory of published versions
| Draft as of 2024-09-18 |
@prefix fhir: <http://hl7.org/fhir/> . @prefix owl: <http://www.w3.org/2002/07/owl#> . @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . # - resource ------------------------------------------------------------------- a fhir:StructureMap ; fhir:nodeRole fhir:treeRoot ; fhir:id [ fhir:v "HIVObservationHIVCondition"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: StructureMap HIVObservationHIVCondition</b></p><a name=\"HIVObservationHIVCondition\"> </a><a name=\"hcHIVObservationHIVCondition\"> </a><a name=\"HIVObservationHIVCondition-en-US\"> </a><pre class=\"fml\">\r\n<b>map</b><span style=\"color: navy\"> "</span>https://IntelliSOFT-Consulting.github.io/HIV-FHIR-IG/StructureMap/HIVObservationHIVCondition<span style=\"color: navy\">" = "</span>HIVObservationHIVCondition<span style=\"color: navy\">"\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">declare the structure defs used</span>\r\n\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R4/bundle.html\" title=\"Bundle\">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style=\"color: navy\">" </span><b>alias </b>input <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R4/bundle.html\" title=\"Bundle\">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style=\"color: navy\">" </span><b>alias </b>output <b>as </b><b>target</b>\r\n\r\n<span style=\"color: navy\">// </span><span style=\"color: green\">declare group with local vars (src, tgt) and their aliases</span>\r\n<span style=\"color: navy\">// </span><span style=\"color: green\">anything ending with semicolon is a rule</span>\r\n<b>group </b>HIVObservationHIVCondition<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>input, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\"> : </span>output<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> <span style=\"color: navy\">// </span><span style=\"color: green\">set bundle type for the output bundle</span>\r\n src<span style=\"color: navy\"><b> -> </b></span>tgt.type = <span style=\"color: blue\">'transaction'</span> <i>"setBundleType"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">loop through patients in input bundle</span>\r\n src.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\"><b> -> </b></span>tgt.entry<b> as </b><span style=\"color: maroon\">tentry</span><b> then</b><span style=\"color: navy\"> {\r\n</span> entry.resource<span style=\"color: navy\"> : </span>Patient<b> as </b><span style=\"color: maroon\">patient</span><span style=\"color: navy\"><b> -> </b></span> tentry.resource = <span style=\"color: maroon\">patient</span><span style=\"color: navy\">, </span> tentry.request<b> as </b><span style=\"color: maroon\">newrequest</span><b> then</b><span style=\"color: navy\"> {\r\n</span> entry<span style=\"color: navy\"><b> -> </b></span>tentry.fullUrl = <span style=\"color: navy\">(</span>'urn:uuid:' & patient.id<span style=\"color: navy\">)</span> <i>"setFullUrl"</i><span style=\"color: navy\">;</span>\r\n entry<span style=\"color: navy\"><b> -> </b></span> newrequest.method = <span style=\"color: blue\">'PUT'</span><span style=\"color: navy\">, </span> newrequest.url = <span style=\"color: navy\">(</span>'Patient/' & patient.id<span style=\"color: navy\">)</span> <i>"setPatientRequest"</i><span style=\"color: navy\">;</span>\r\n entry<span style=\"color: navy\"><b> -> </b></span> tgt.entry<b> as </b><span style=\"color: maroon\">pentry</span><span style=\"color: navy\">, </span> pentry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Provenance'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">prov</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span> pentry.request<b> as </b><span style=\"color: maroon\">prequest</span><b> then</b><span style=\"color: navy\"> {\r\n</span> patient<span style=\"color: navy\"><b> -> </b></span>prov.id = <span style=\"color: maroon\">pid</span> <i>"setPId"</i><span style=\"color: navy\">;</span>\r\n patient<span style=\"color: navy\"><b> -> </b></span>pentry.fullUrl = <span style=\"color: navy\">(</span>'urn:uuid:' & pid<span style=\"color: navy\">)</span> <i>"setFullUrl"</i><span style=\"color: navy\">;</span>\r\n patient<span style=\"color: navy\"><b> -> </b></span> prequest.method = <span style=\"color: blue\">'PUT'</span><span style=\"color: navy\">, </span> prequest.url = <span style=\"color: navy\">(</span>'Provenance/' & pid<span style=\"color: navy\">)</span> <i>"setrequest"</i><span style=\"color: navy\">;</span>\r\n patient<span style=\"color: navy\"><b> -> </b></span>prov.target<b> as </b><span style=\"color: maroon\">ptarg</span><b> then</b><span style=\"color: navy\"> {\r\n</span> patient<span style=\"color: navy\"><b> -> </b></span>ptarg.reference = <span style=\"color: navy\">(</span>'urn:uuid:' & patient.id<span style=\"color: navy\">)</span> <i>"setTargetRef"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setTarget"</i><span style=\"color: navy\">;</span>\r\n patient<span style=\"color: navy\"><b> -> </b></span>prov.entity<b> as </b><span style=\"color: maroon\">entity</span><b> then</b><span style=\"color: navy\"> {\r\n</span> patient<span style=\"color: navy\"><b> -> </b></span>entity.role = <span style=\"color: blue\">'source'</span> <i>"setRole"</i><span style=\"color: navy\">;</span>\r\n patient<span style=\"color: navy\"><b> -> </b></span>entity.what<b> as </b><span style=\"color: maroon\">pwhat</span><b> then </b>setProvenanceFromBundleId<span style=\"color: navy\">(</span><span style=\"color: maroon\">src</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pwhat</span><span style=\"color: navy\">)</span> <i>"setWhatId"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setEntity"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setProvenance"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">for observations of that patient look for art program enrollment</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">create a condition resource in output with uuid</span>\r\n src.entry<b> as </b><span style=\"color: maroon\">obsentry</span><b> where </b>resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '160540')))<span style=\"color: navy\"><b> -> </b></span> tgt.entry<b> as </b><span style=\"color: maroon\">newentry</span><span style=\"color: navy\">, </span> newentry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Condition'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">cond</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">cid</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obsentry.resource<b> as </b><span style=\"color: maroon\">obs</span><span style=\"color: navy\"><b> -> </b></span> newentry.fullUrl = <span style=\"color: navy\">(</span>'urn:uuid:' & cid<span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> newentry.request<b> as </b><span style=\"color: maroon\">newrequest</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obsentry<span style=\"color: navy\"><b> -> </b></span>cond.id = <span style=\"color: maroon\">cid</span> <i>"setCId"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">setrequest rule for resource in transaction bundle</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">needs to be processed properly before putting on existing data on fhir server</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span> newrequest.method = <span style=\"color: blue\">'PUT'</span><span style=\"color: navy\">, </span> newrequest.url = <span style=\"color: navy\">(</span>'Condition/' & cid<span style=\"color: navy\">)</span> <i>"setrequest"</i><span style=\"color: navy\">;</span>\r\n patient<span style=\"color: navy\"><b> -> </b></span>cond.subject<b> as </b><span style=\"color: maroon\">subject</span><b> then</b><span style=\"color: navy\"> {\r\n</span> patient<span style=\"color: navy\"><b> -> </b></span>subject.reference = <b>reference</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">patient</span><span style=\"color: navy\">)</span> <i>"setSubjectRef"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setSubject"</i><span style=\"color: navy\">;</span>\r\n obs.effective<b> as </b><span style=\"color: maroon\">effective</span><span style=\"color: navy\"><b> -> </b></span>cond.onset = <span style=\"color: maroon\">effective</span> <i>"setOnset"</i><span style=\"color: navy\">;</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span>cond.clinicalStatus = <b>cc</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://terminology.hl7.org/CodeSystem/condition-clinical'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'active'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'Active'</span><span style=\"color: navy\">)</span> <i>"setClinicalStatus"</i><span style=\"color: navy\">;</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span>cond.code = <b>cc</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'HIV.B.DE116'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'HIV-positive'</span><span style=\"color: navy\">)</span> <i>"setCode"</i><span style=\"color: navy\">;</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span>cond.category = <b>cc</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://terminology.hl7.org/CodeSystem/condition-category'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'encounter-diagnosis'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'Encounter Diagnosis'</span><span style=\"color: navy\">)</span> <i>"setCategory"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">create provenance resource to document input/output resources links</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span> tgt.entry<b> as </b><span style=\"color: maroon\">pentry</span><span style=\"color: navy\">, </span> pentry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Provenance'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">prov</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span> pentry.request<b> as </b><span style=\"color: maroon\">prequest</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obs<span style=\"color: navy\"><b> -> </b></span>prov.id = <span style=\"color: maroon\">pid</span> <i>"setPId"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>pentry.fullUrl = <span style=\"color: navy\">(</span>'urn:uuid:' & pid<span style=\"color: navy\">)</span> <i>"setFullUrl"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span> prequest.method = <span style=\"color: blue\">'PUT'</span><span style=\"color: navy\">, </span> prequest.url = <span style=\"color: navy\">(</span>'Provenance/' & pid<span style=\"color: navy\">)</span> <i>"setrequest"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>prov.target<b> as </b><span style=\"color: maroon\">ptarg</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obs<span style=\"color: navy\"><b> -> </b></span>ptarg.reference = <span style=\"color: navy\">(</span>'urn:uuid:' & cid<span style=\"color: navy\">)</span> <i>"setTargetRef"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setTarget"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>prov.entity<b> as </b><span style=\"color: maroon\">entity</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obs<span style=\"color: navy\"><b> -> </b></span>entity.role = <span style=\"color: blue\">'source'</span> <i>"setRole"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>entity.what<b> as </b><span style=\"color: maroon\">pwhat</span><b> then </b>setProvenanceFromBundleId<span style=\"color: navy\">(</span><span style=\"color: maroon\">src</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pwhat</span><span style=\"color: navy\">)</span> <i>"setWhatId"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setEntity"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setProvenance"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setCondition"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"getOnARTObservation"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">for observations of that patient look for return visit date</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">create a medication request resource in output with uuid</span>\r\n src.entry<b> as </b><span style=\"color: maroon\">obsentry</span><b> where </b>resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '5096')))<span style=\"color: navy\"><b> -> </b></span> tgt.entry<b> as </b><span style=\"color: maroon\">newentry</span><span style=\"color: navy\">, </span> newentry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'MedicationStatement'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">ms</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">msid</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obsentry.resource<b> as </b><span style=\"color: maroon\">obs</span><span style=\"color: navy\"><b> -> </b></span> newentry.fullUrl = <span style=\"color: navy\">(</span>'urn:uuid:' & msid<span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> newentry.request<b> as </b><span style=\"color: maroon\">newrequest</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obsentry<span style=\"color: navy\"><b> -> </b></span>ms.id = <span style=\"color: maroon\">msid</span> <i>"setMSId"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">setrequest rule for resource in transaction bundle</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">needs to be processed properly before putting on existing data on fhir server</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span> newrequest.method = <span style=\"color: blue\">'PUT'</span><span style=\"color: navy\">, </span> newrequest.url = <span style=\"color: navy\">(</span>'MedicationStatement/' & msid<span style=\"color: navy\">)</span> <i>"setrequest"</i><span style=\"color: navy\">;</span>\r\n patient<span style=\"color: navy\"><b> -> </b></span>ms.subject<b> as </b><span style=\"color: maroon\">subject</span><b> then</b><span style=\"color: navy\"> {\r\n</span> patient<span style=\"color: navy\"><b> -> </b></span>subject.reference = <b>reference</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">patient</span><span style=\"color: navy\">)</span> <i>"setSubjectRef"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setSubject"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">obs.effective as effective -> ms.effective = effective "setEffective";</span>\r\n obs.effective<span style=\"color: navy\"> : </span>dateTime<b> as </b><span style=\"color: maroon\">effective</span><span style=\"color: navy\"><b> -> </b></span>ms.effective = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Period'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">mseffective</span><b> then</b><span style=\"color: navy\"> {\r\n</span> effective<span style=\"color: navy\"><b> -> </b></span>mseffective.start = <span style=\"color: maroon\">effective</span> <i>"setEffectiveStart"</i><span style=\"color: navy\">;</span>\r\n effective<span style=\"color: navy\"><b> -> </b></span>mseffective.end = <span style=\"color: navy\">(</span>%effective + 30 'days'<span style=\"color: navy\">)</span> <i>"setEffectiveEnd"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setEffective"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">not correct in hiv l3</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span>ms.status = <span style=\"color: blue\">'active'</span> <i>"setStatus"</i><span style=\"color: navy\">;</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span>ms.reasonCode = <b>cc</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'HIV.H.DE47'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'On ART'</span><span style=\"color: navy\">)</span> <i>"setMSReasonCode"</i><span style=\"color: navy\">;</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span>ms.medication = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">medication</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obsentry<span style=\"color: navy\"><b> -> </b></span>medication.coding<b> as </b><span style=\"color: maroon\">coding</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obsentry<span style=\"color: navy\"><b> -> </b></span> coding.code = <span style=\"color: blue\">'160119'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'CURRENTLY TAKING ARV'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'https://cielterminology.org'</span> <i>"setMSCoding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setMSCoding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"SetMSMedication"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">create provenance resource to document input/output resources links</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span> tgt.entry<b> as </b><span style=\"color: maroon\">pentry</span><span style=\"color: navy\">, </span> pentry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Provenance'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">prov</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span> pentry.request<b> as </b><span style=\"color: maroon\">prequest</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obs<span style=\"color: navy\"><b> -> </b></span>prov.id = <span style=\"color: maroon\">pid</span> <i>"setPId"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>pentry.fullUrl = <span style=\"color: navy\">(</span>'urn:uuid:' & pid<span style=\"color: navy\">)</span> <i>"setFullUrl"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span> prequest.method = <span style=\"color: blue\">'PUT'</span><span style=\"color: navy\">, </span> prequest.url = <span style=\"color: navy\">(</span>'Provenance/' & pid<span style=\"color: navy\">)</span> <i>"setrequest"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>prov.target<b> as </b><span style=\"color: maroon\">ptarg</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obs<span style=\"color: navy\"><b> -> </b></span>ptarg.reference = <span style=\"color: navy\">(</span>'urn:uuid:' & msid<span style=\"color: navy\">)</span> <i>"setTargetRef"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setTarget"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>prov.entity<b> as </b><span style=\"color: maroon\">entity</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obs<span style=\"color: navy\"><b> -> </b></span>entity.role = <span style=\"color: blue\">'source'</span> <i>"setRole"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>entity.what<b> as </b><span style=\"color: maroon\">pwhat</span><b> then </b>setProvenanceFromBundleId<span style=\"color: navy\">(</span><span style=\"color: maroon\">src</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pwhat</span><span style=\"color: navy\">)</span> <i>"setWhatId"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setEntity"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setProvenance"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setMedicationStatement"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"getVisitObservation"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">create observation resource with the positive hiv test codes</span>\r\n <span style=\"color: navy\">// </span><span style=\"color: green\">this will have to be one for hiv positive and one for hiv negative</span>\r\n src.entry<b> as </b><span style=\"color: maroon\">obsentry</span><b> where </b>resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '159427')))<span style=\"color: navy\"><b> -> </b></span> tgt.entry<b> as </b><span style=\"color: maroon\">newentry</span><span style=\"color: navy\">, </span> newentry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Observation'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">observe</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">obsd</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obsentry.resource<b> as </b><span style=\"color: maroon\">obs</span><span style=\"color: navy\"><b> -> </b></span> newentry.fullUrl = <span style=\"color: navy\">(</span>'urn:uuid:' & obsd<span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> newentry.request<b> as </b><span style=\"color: maroon\">newrequest</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obsentry<span style=\"color: navy\"><b> -> </b></span>observe.id = <span style=\"color: maroon\">obsd</span> <i>"setOBSd"</i><span style=\"color: navy\">;</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span> newrequest.method = <span style=\"color: blue\">'PUT'</span><span style=\"color: navy\">, </span> newrequest.url = <span style=\"color: navy\">(</span>'Observation/' & obsd<span style=\"color: navy\">)</span> <i>"setrequest"</i><span style=\"color: navy\">;</span>\r\n patient<span style=\"color: navy\"><b> -> </b></span>observe.subject<b> as </b><span style=\"color: maroon\">subject</span><b> then</b><span style=\"color: navy\"> {\r\n</span> patient<span style=\"color: navy\"><b> -> </b></span>subject.reference = <b>reference</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">patient</span><span style=\"color: navy\">)</span> <i>"setSubjectRef"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setSubject"</i><span style=\"color: navy\">;</span>\r\n obs.effective<b> as </b><span style=\"color: maroon\">effective</span><span style=\"color: navy\"><b> -> </b></span>observe.effective = <span style=\"color: maroon\">effective</span> <i>"setOnset"</i><span style=\"color: navy\">;</span>\r\n obs.code<b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\"><b> -> </b></span>observe.code = <span style=\"color: maroon\">code</span> <i>"setCode"</i><span style=\"color: navy\">;</span>\r\n obs.value<span style=\"color: navy\"> : </span>CodeableConcept<b> as </b><span style=\"color: maroon\">value</span><b> where </b>coding.exists((system = 'https://cielterminology.org') and (code = '664'))<span style=\"color: navy\"><b> -> </b></span>observe.value = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">val</span><b> then</b><span style=\"color: navy\"> {\r\n</span> value<span style=\"color: navy\"><b> -> </b></span>val.coding<b> as </b><span style=\"color: maroon\">coding</span><b> then</b><span style=\"color: navy\"> {\r\n</span> value<span style=\"color: navy\"><b> -> </b></span> coding.system = <span style=\"color: blue\">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'HIV.B.DE117'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'HIV-negative'</span> <i>"setNegativeCC"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setNegativeCoding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setValueNegative"</i><span style=\"color: navy\">;</span>\r\n obs.value<span style=\"color: navy\"> : </span>CodeableConcept<b> as </b><span style=\"color: maroon\">value</span><b> where </b>coding.exists((system = 'https://cielterminology.org') and (code = '138571'))<span style=\"color: navy\"><b> -> </b></span>observe.value = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">val</span><b> then</b><span style=\"color: navy\"> {\r\n</span> value<span style=\"color: navy\"><b> -> </b></span>val.coding<b> as </b><span style=\"color: maroon\">coding</span><b> then</b><span style=\"color: navy\"> {\r\n</span> value<span style=\"color: navy\"><b> -> </b></span> coding.system = <span style=\"color: blue\">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'HIV.B.DE116'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'HIV-positive'</span> <i>"setPositiveCC"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setPositiveCoding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setValuePositive1"</i><span style=\"color: navy\">;</span>\r\n obs.value<span style=\"color: navy\"> : </span>CodeableConcept<b> as </b><span style=\"color: maroon\">value</span><b> where </b>coding.exists((system = 'https://cielterminology.org') and (code = '703'))<span style=\"color: navy\"><b> -> </b></span>observe.value = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">val</span><b> then</b><span style=\"color: navy\"> {\r\n</span> value<span style=\"color: navy\"><b> -> </b></span>val.coding<b> as </b><span style=\"color: maroon\">coding</span><b> then</b><span style=\"color: navy\"> {\r\n</span> value<span style=\"color: navy\"><b> -> </b></span> coding.system = <span style=\"color: blue\">'http://smart.who.int/hiv/CodeSystem/HIVConcepts'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'HIV.B.DE116'</span><span style=\"color: navy\">, </span> coding.display = <span style=\"color: blue\">'HIV-positive'</span> <i>"setPositiveCC"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setPositiveCoding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setValuePositive2"</i><span style=\"color: navy\">;</span>\r\n obsentry<span style=\"color: navy\"><b> -> </b></span>observe.status = <b>cc</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://hl7.org/fhir/observation-status'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'final'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'Final'</span><span style=\"color: navy\">)</span> <i>"setStatus"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span> tgt.entry<b> as </b><span style=\"color: maroon\">pentry</span><span style=\"color: navy\">, </span> pentry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Provenance'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">prov</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span> pentry.request<b> as </b><span style=\"color: maroon\">prequest</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obs<span style=\"color: navy\"><b> -> </b></span>prov.id = <span style=\"color: maroon\">pid</span> <i>"setPId"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>pentry.fullUrl = <span style=\"color: navy\">(</span>'urn:uuid:' & pid<span style=\"color: navy\">)</span> <i>"setFullUrl"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span> prequest.method = <span style=\"color: blue\">'PUT'</span><span style=\"color: navy\">, </span> prequest.url = <span style=\"color: navy\">(</span>'Provenance/' & pid<span style=\"color: navy\">)</span> <i>"setrequest"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>prov.target<b> as </b><span style=\"color: maroon\">ptarg</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obs<span style=\"color: navy\"><b> -> </b></span>ptarg.reference = <span style=\"color: navy\">(</span>'urn:uuid:' & cid<span style=\"color: navy\">)</span> <i>"setTargetRef"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setTarget"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>prov.entity<b> as </b><span style=\"color: maroon\">entity</span><b> then</b><span style=\"color: navy\"> {\r\n</span> obs<span style=\"color: navy\"><b> -> </b></span>entity.role = <span style=\"color: blue\">'source'</span> <i>"setRole"</i><span style=\"color: navy\">;</span>\r\n obs<span style=\"color: navy\"><b> -> </b></span>entity.what<b> as </b><span style=\"color: maroon\">pwhat</span><b> then </b>setProvenanceFromBundleId<span style=\"color: navy\">(</span><span style=\"color: maroon\">src</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pwhat</span><span style=\"color: navy\">)</span> <i>"setWhatId"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setEntity"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setProvenance"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setHIVPositiveTest"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"getOnARTObservation"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"patientResource"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"copyPatient"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>setProvenanceFromBundleId<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>input, <b>target</b> <span style=\"color: maroon\">provwhat</span><span style=\"color: navy\"> : </span>Reference<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> bundle.id<b> as </b><span style=\"color: maroon\">bundleid</span><span style=\"color: navy\"><b> -> </b></span>provwhat.identifier<b> as </b><span style=\"color: maroon\">whatid</span><b> then</b><span style=\"color: navy\"> {\r\n</span> bundleid<span style=\"color: navy\"><b> -> </b></span>whatid.value = <span style=\"color: navy\">(</span>'Bundle/' & bundleid<span style=\"color: navy\">)</span> <i>"setWhatIdValue"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"setWhatId"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>" ] ; # fhir:url [ fhir:v "https://IntelliSOFT-Consulting.github.io/HIV-FHIR-IG/StructureMap/HIVObservationHIVCondition"^^xsd:anyURI] ; # fhir:version [ fhir:v "0.1.0"] ; # fhir:name [ fhir:v "HIVObservationHIVCondition"] ; # fhir:status [ fhir:v "draft"] ; # fhir:date [ fhir:v "2024-09-18T19:24:24+00:00"^^xsd:dateTime] ; # fhir:publisher [ fhir:v "intellisoftkenya"] ; # fhir:contact ( [ fhir:name [ fhir:v "intellisoftkenya" ] ; ( fhir:telecom [ fhir:system [ fhir:v "url" ] ; fhir:value [ fhir:v "https://www.intellisoftkenya.com/" ] ] ) ] ) ; # fhir:description [ fhir:v "declare the structure defs used"] ; # fhir:structure ( [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/Bundle"^^xsd:anyURI ; fhir:link <http://hl7.org/fhir/StructureDefinition/Bundle> ] ; fhir:mode [ fhir:v "source" ] ; fhir:alias [ fhir:v "input" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/Bundle"^^xsd:anyURI ; fhir:link <http://hl7.org/fhir/StructureDefinition/Bundle> ] ; fhir:mode [ fhir:v "target" ] ; fhir:alias [ fhir:v "output" ] ] ) ; # fhir:group ( [ fhir:name [ fhir:v "HIVObservationHIVCondition" ] ; fhir:typeMode [ fhir:v "none" ] ; fhir:documentation [ fhir:v "declare group with local vars (src, tgt) and their aliases\r\nanything ending with semicolon is a rule" ] ; ( fhir:input [ fhir:name [ fhir:v "src" ] ; fhir:type [ fhir:v "input" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "tgt" ] ; fhir:type [ fhir:v "output" ] ; fhir:mode [ fhir:v "target" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setBundleType" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "type" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "transaction" ] ] ) ] ) ] [ fhir:name [ fhir:v "copyPatient" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "entry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "tentry" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "patientResource" ] ; ( fhir:source [ fhir:context [ fhir:v "entry" ] ; fhir:type [ fhir:v "Patient" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "patient" ] ] ) ] [ fhir:context [ fhir:v "tentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "request" ] ; fhir:variable [ fhir:v "newrequest" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setFullUrl" ] ; ( fhir:source [ fhir:context [ fhir:v "entry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & patient.id" ] ] ) ] ) ] [ fhir:name [ fhir:v "setPatientRequest" ] ; ( fhir:source [ fhir:context [ fhir:v "entry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "newrequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "method" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "PUT" ] ] ) ] [ fhir:context [ fhir:v "newrequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "url" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'Patient/' & patient.id" ] ] ) ] ) ] [ fhir:name [ fhir:v "setProvenance" ] ; ( fhir:source [ fhir:context [ fhir:v "entry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "pentry" ] ] [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "prov" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Provenance" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "pid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "request" ] ; fhir:variable [ fhir:v "prequest" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setPId" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setFullUrl" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setrequest" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "method" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "PUT" ] ] ) ] [ fhir:context [ fhir:v "prequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "url" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'Provenance/' & pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setTarget" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "target" ] ; fhir:variable [ fhir:v "ptarg" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setTargetRef" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ptarg" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & patient.id" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setEntity" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entity" ] ; fhir:variable [ fhir:v "entity" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setRole" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entity" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "role" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "source" ] ] ) ] ) ] [ fhir:name [ fhir:v "setWhatId" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entity" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "what" ] ; fhir:variable [ fhir:v "pwhat" ] ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "setProvenanceFromBundleId" ] ; ( fhir:variable [ fhir:v "src" ] [ fhir:v "pwhat" ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "getOnARTObservation" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "obsentry" ] ; fhir:condition [ fhir:v "resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '160540')))" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "newentry" ] ] [ fhir:context [ fhir:v "newentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "cond" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Condition" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "cid" ] ; fhir:transform [ fhir:v "uuid" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setCondition" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "newentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & cid" ] ] ) ] [ fhir:context [ fhir:v "newentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "request" ] ; fhir:variable [ fhir:v "newrequest" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setCId" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "cond" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "cid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setrequest" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "newrequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "method" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "PUT" ] ] ) ] [ fhir:context [ fhir:v "newrequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "url" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'Condition/' & cid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setSubject" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "cond" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "subject" ] ; fhir:variable [ fhir:v "subject" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setSubjectRef" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "subject" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "reference" ] ; ( fhir:parameter [ fhir:value [ fhir:v "patient" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setOnset" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ; fhir:element [ fhir:v "effective" ] ; fhir:variable [ fhir:v "effective" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "cond" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "onset" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "effective" ] ] ) ] ) ] [ fhir:name [ fhir:v "setClinicalStatus" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "cond" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "clinicalStatus" ] ; fhir:transform [ fhir:v "cc" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://terminology.hl7.org/CodeSystem/condition-clinical" ] ] [ fhir:value [ fhir:v "active" ] ] [ fhir:value [ fhir:v "Active" ] ] ) ] ) ] [ fhir:name [ fhir:v "setCode" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "cond" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "cc" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://smart.who.int/hiv/CodeSystem/HIVConcepts" ] ] [ fhir:value [ fhir:v "HIV.B.DE116" ] ] [ fhir:value [ fhir:v "HIV-positive" ] ] ) ] ) ] [ fhir:name [ fhir:v "setCategory" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "cond" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "category" ] ; fhir:transform [ fhir:v "cc" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://terminology.hl7.org/CodeSystem/condition-category" ] ] [ fhir:value [ fhir:v "encounter-diagnosis" ] ] [ fhir:value [ fhir:v "Encounter Diagnosis" ] ] ) ] ) ] [ fhir:name [ fhir:v "setProvenance" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "pentry" ] ] [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "prov" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Provenance" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "pid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "request" ] ; fhir:variable [ fhir:v "prequest" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setPId" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setFullUrl" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setrequest" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "method" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "PUT" ] ] ) ] [ fhir:context [ fhir:v "prequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "url" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'Provenance/' & pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setTarget" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "target" ] ; fhir:variable [ fhir:v "ptarg" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setTargetRef" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ptarg" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & cid" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setEntity" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entity" ] ; fhir:variable [ fhir:v "entity" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setRole" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entity" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "role" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "source" ] ] ) ] ) ] [ fhir:name [ fhir:v "setWhatId" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entity" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "what" ] ; fhir:variable [ fhir:v "pwhat" ] ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "setProvenanceFromBundleId" ] ; ( fhir:variable [ fhir:v "src" ] [ fhir:v "pwhat" ] ) ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "getVisitObservation" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "obsentry" ] ; fhir:condition [ fhir:v "resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '5096')))" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "newentry" ] ] [ fhir:context [ fhir:v "newentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "ms" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "MedicationStatement" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "msid" ] ; fhir:transform [ fhir:v "uuid" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setMedicationStatement" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "newentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & msid" ] ] ) ] [ fhir:context [ fhir:v "newentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "request" ] ; fhir:variable [ fhir:v "newrequest" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setMSId" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ms" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "msid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setrequest" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "newrequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "method" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "PUT" ] ] ) ] [ fhir:context [ fhir:v "newrequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "url" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'MedicationStatement/' & msid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setSubject" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ms" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "subject" ] ; fhir:variable [ fhir:v "subject" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setSubjectRef" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "subject" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "reference" ] ; ( fhir:parameter [ fhir:value [ fhir:v "patient" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setEffective" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ; fhir:type [ fhir:v "dateTime" ] ; fhir:element [ fhir:v "effective" ] ; fhir:variable [ fhir:v "effective" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ms" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "effective" ] ; fhir:variable [ fhir:v "mseffective" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Period" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setEffectiveStart" ] ; ( fhir:source [ fhir:context [ fhir:v "effective" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "mseffective" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "start" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "effective" ] ] ) ] ) ] [ fhir:name [ fhir:v "setEffectiveEnd" ] ; ( fhir:source [ fhir:context [ fhir:v "effective" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "mseffective" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "end" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "%effective + 30 'days'" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setStatus" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ms" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "status" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "active" ] ] ) ] ) ] [ fhir:name [ fhir:v "setMSReasonCode" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ms" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reasonCode" ] ; fhir:transform [ fhir:v "cc" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://smart.who.int/hiv/CodeSystem/HIVConcepts" ] ] [ fhir:value [ fhir:v "HIV.H.DE47" ] ] [ fhir:value [ fhir:v "On ART" ] ] ) ] ) ] [ fhir:name [ fhir:v "SetMSMedication" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ms" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "medication" ] ; fhir:variable [ fhir:v "medication" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setMSCoding" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "medication" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "coding" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setMSCoding" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "160119" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "CURRENTLY TAKING ARV" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "https://cielterminology.org" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setProvenance" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "pentry" ] ] [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "prov" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Provenance" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "pid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "request" ] ; fhir:variable [ fhir:v "prequest" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setPId" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setFullUrl" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setrequest" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "method" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "PUT" ] ] ) ] [ fhir:context [ fhir:v "prequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "url" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'Provenance/' & pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setTarget" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "target" ] ; fhir:variable [ fhir:v "ptarg" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setTargetRef" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ptarg" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & msid" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setEntity" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entity" ] ; fhir:variable [ fhir:v "entity" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setRole" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entity" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "role" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "source" ] ] ) ] ) ] [ fhir:name [ fhir:v "setWhatId" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entity" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "what" ] ; fhir:variable [ fhir:v "pwhat" ] ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "setProvenanceFromBundleId" ] ; ( fhir:variable [ fhir:v "src" ] [ fhir:v "pwhat" ] ) ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "getOnARTObservation" ] ; ( fhir:source [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "obsentry" ] ; fhir:condition [ fhir:v "resource.is(Observation) and resource.subject.exists(reference = ('Patient/' & patient.id)) and resource.code.exists(coding.exists((system = 'https://cielterminology.org') and (code = '159427')))" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "newentry" ] ] [ fhir:context [ fhir:v "newentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "observe" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Observation" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "obsd" ] ; fhir:transform [ fhir:v "uuid" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setHIVPositiveTest" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "newentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & obsd" ] ] ) ] [ fhir:context [ fhir:v "newentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "request" ] ; fhir:variable [ fhir:v "newrequest" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setOBSd" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observe" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "obsd" ] ] ) ] ) ] [ fhir:name [ fhir:v "setrequest" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "newrequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "method" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "PUT" ] ] ) ] [ fhir:context [ fhir:v "newrequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "url" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'Observation/' & obsd" ] ] ) ] ) ] [ fhir:name [ fhir:v "setSubject" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observe" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "subject" ] ; fhir:variable [ fhir:v "subject" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setSubjectRef" ] ; ( fhir:source [ fhir:context [ fhir:v "patient" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "subject" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "reference" ] ; ( fhir:parameter [ fhir:value [ fhir:v "patient" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setOnset" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ; fhir:element [ fhir:v "effective" ] ; fhir:variable [ fhir:v "effective" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observe" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "effective" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "effective" ] ] ) ] ) ] [ fhir:name [ fhir:v "setCode" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ; fhir:element [ fhir:v "code" ] ; fhir:variable [ fhir:v "code" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observe" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "code" ] ] ) ] ) ] [ fhir:name [ fhir:v "setValueNegative" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ; fhir:type [ fhir:v "CodeableConcept" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "value" ] ; fhir:condition [ fhir:v "coding.exists((system = 'https://cielterminology.org') and (code = '664'))" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observe" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "val" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setNegativeCoding" ] ; ( fhir:source [ fhir:context [ fhir:v "value" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "val" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "coding" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setNegativeCC" ] ; ( fhir:source [ fhir:context [ fhir:v "value" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://smart.who.int/hiv/CodeSystem/HIVConcepts" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "HIV.B.DE117" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "HIV-negative" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setValuePositive1" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ; fhir:type [ fhir:v "CodeableConcept" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "value" ] ; fhir:condition [ fhir:v "coding.exists((system = 'https://cielterminology.org') and (code = '138571'))" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observe" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "val" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setPositiveCoding" ] ; ( fhir:source [ fhir:context [ fhir:v "value" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "val" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "coding" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setPositiveCC" ] ; ( fhir:source [ fhir:context [ fhir:v "value" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://smart.who.int/hiv/CodeSystem/HIVConcepts" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "HIV.B.DE116" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "HIV-positive" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setValuePositive2" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ; fhir:type [ fhir:v "CodeableConcept" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "value" ] ; fhir:condition [ fhir:v "coding.exists((system = 'https://cielterminology.org') and (code = '703'))" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observe" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "val" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "CodeableConcept" ] ] ) ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setPositiveCoding" ] ; ( fhir:source [ fhir:context [ fhir:v "value" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "val" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "coding" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setPositiveCC" ] ; ( fhir:source [ fhir:context [ fhir:v "value" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "system" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://smart.who.int/hiv/CodeSystem/HIVConcepts" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "code" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "HIV.B.DE116" ] ] ) ] [ fhir:context [ fhir:v "coding" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "display" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "HIV-positive" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setStatus" ] ; ( fhir:source [ fhir:context [ fhir:v "obsentry" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "observe" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "status" ] ; fhir:transform [ fhir:v "cc" ] ; ( fhir:parameter [ fhir:value [ fhir:v "http://hl7.org/fhir/observation-status" ] ] [ fhir:value [ fhir:v "final" ] ] [ fhir:value [ fhir:v "Final" ] ] ) ] ) ] [ fhir:name [ fhir:v "setProvenance" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "tgt" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entry" ] ; fhir:variable [ fhir:v "pentry" ] ] [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "resource" ] ; fhir:variable [ fhir:v "prov" ] ; fhir:transform [ fhir:v "create" ] ; ( fhir:parameter [ fhir:value [ fhir:v "Provenance" ] ] ) ] [ fhir:contextType [ fhir:v "variable" ] ; fhir:variable [ fhir:v "pid" ] ; fhir:transform [ fhir:v "uuid" ] ] [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "request" ] ; fhir:variable [ fhir:v "prequest" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setPId" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "id" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setFullUrl" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "pentry" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "fullUrl" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setrequest" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "method" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "PUT" ] ] ) ] [ fhir:context [ fhir:v "prequest" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "url" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'Provenance/' & pid" ] ] ) ] ) ] [ fhir:name [ fhir:v "setTarget" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "target" ] ; fhir:variable [ fhir:v "ptarg" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setTargetRef" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "ptarg" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "reference" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'urn:uuid:' & cid" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setEntity" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "prov" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "entity" ] ; fhir:variable [ fhir:v "entity" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setRole" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entity" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "role" ] ; fhir:transform [ fhir:v "copy" ] ; ( fhir:parameter [ fhir:value [ fhir:v "source" ] ] ) ] ) ] [ fhir:name [ fhir:v "setWhatId" ] ; ( fhir:source [ fhir:context [ fhir:v "obs" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "entity" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "what" ] ; fhir:variable [ fhir:v "pwhat" ] ] ) ; ( fhir:dependent [ fhir:name [ fhir:v "setProvenanceFromBundleId" ] ; ( fhir:variable [ fhir:v "src" ] [ fhir:v "pwhat" ] ) ] ) ] ) ] ) ] ) ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "setProvenanceFromBundleId" ] ; fhir:typeMode [ fhir:v "none" ] ; ( fhir:input [ fhir:name [ fhir:v "bundle" ] ; fhir:type [ fhir:v "input" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "provwhat" ] ; fhir:type [ fhir:v "Reference" ] ; fhir:mode [ fhir:v "target" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setWhatId" ] ; ( fhir:source [ fhir:context [ fhir:v "bundle" ] ; fhir:element [ fhir:v "id" ] ; fhir:variable [ fhir:v "bundleid" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "provwhat" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "identifier" ] ; fhir:variable [ fhir:v "whatid" ] ] ) ; ( fhir:rule [ fhir:name [ fhir:v "setWhatIdValue" ] ; ( fhir:source [ fhir:context [ fhir:v "bundleid" ] ] ) ; ( fhir:target [ fhir:context [ fhir:v "whatid" ] ; fhir:contextType [ fhir:v "variable" ] ; fhir:element [ fhir:v "value" ] ; fhir:transform [ fhir:v "evaluate" ] ; ( fhir:parameter [ fhir:value [ fhir:v "'Bundle/' & bundleid" ] ] ) ] ) ] ) ] ) ] ) . #
IG © 2024+ intellisoftkenya. Package fhir.hivfhirIg#0.1.0 based on FHIR 4.0.1. Generated 2024-09-18
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