HL7 Version 2 to FHIR
1.0.0-ballot - ballot International flag

HL7 Version 2 to FHIR, published by HL7 International / Orders and Observations. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/v2-to-fhir/ and changes regularly. See the Directory of published versions

ConceptMap: Segment SPM to Specimen Map (Experimental)

Official URL: http://hl7.org/fhir/uv/v2mappings/segment-spm-to-specimen Version: 1.0.0-ballot
Active as of 2024-12-20 Computable Name: SegmentSPMToSpecimen

Copyright/Legal: Copyright (c) 2020, HL7 International, Inc., All Rights Reserved.

This ConceptMap represents a mapping from the HL7 V2 Segment SPM to the FHIR Specimen Resource.

This ConceptMap represents the mapping from the HL7 V2 SPM Segment to the FHIR Specimen Resource. See also the FHIR Shorthand or the CSV Source.

HL7 v2Condition (IF True, args)HL7 FHIRComments
Sort OrderIdentifierNameData TypeCardinality - MinCardinality - MaxComputable ANTLRComputable FHIRPathNarrativeFHIR AttributeExtensionData TypeCardinality - MinCardinality - MaxData Type MappingVocabulary Mapping
(IS, ID, CE, CEN, CWE)		Assignment
1SPM-1Set ID - SPMSI01
2SPM-2Specimen IDEIP01Specimen.identifierSpecimen.Identifier0-1EIP[Identifier-PlacerAssignedIdentifier]
2SPM-2Specimen IDEIP01Specimen.identifierSpecimen.Identifier0-1EIP[Identifier-FillerAssignedIdentifier]
3SPM-3Specimen Parent IDsEIP0-1Specimen.parent(Specimen.Specimen.identifier)Specimen.Identifier0-1EIP[Identifier-PlacerAssignedIdentifier]
3SPM-3Specimen Parent IDsEIP0-1Specimen.parent(Specimen.Specimen.identifier)Specimen.Identifier0-1EIP[Identifier-FillerAssignedIdentifier]
4SPM-4Specimen TypeCWE11Specimen.typeSpecimen.CodeableConcept01CWE[CodeableConcept]SpecimenType
5SPM-5Specimen Type ModifierCWE0-1
6SPM-6Specimen AdditivesCWE0-1Specimen.container.additiveCodeableConceptSpecimen.CodeableConcept01CWE[CodeableConcept]Additive/Preservative
7SPM-7Specimen Collection MethodCWE01Specimen.collection.methodSpecimen.CodeableConcept01CWE[CodeableConcept]SpecimenCollectionMethodThis should not be populated in a message corresponding to a ServiceRequest (eg ORM)
8SPM-8Specimen Source SiteCWE01Specimen.collection.bodySiteSpecimen.CodeableConcept01CWE[CodeableConcept]SpecimenSourceSiteThis should not be populated in a message corresponding to a ServiceRequest (eg ORM)
9SPM-9Specimen Source Site ModifierCWE0-1collection.extension??-bodySiteModifierSpecimen.CodeableConcept0-1CWE[CodeableConcept]SpecimenSourceTypeModifierNote that when using SNOMED codes in SPM-8, these are covered.
10SPM-10Specimen Collection SiteCWE01
11SPM-11Specimen RoleCWE0-1
12SPM-12Specimen Collection AmountCQ01Specimen.collection.quantitySpecimen.SimpleQuantity01CQ[Quantity]
13SPM-13Grouped Specimen CountNM01
14SPM-14Specimen DescriptionST0-1Specimen.note(Specimen.Annotation.text)Specimen.markdown11
15SPM-15Specimen Handling CodeCWE0-1
16SPM-16Specimen Risk CodeCWE0-1
17SPM-17Specimen Collection Date/TimeDR01IF SPM-17.2 VALUEDSpecimen.collection.collectedPeriodDR[Period]
17SPM-17Specimen Collection Date/TimeDR01IF SPM-17.2 NOT VALUEDSpecimen.collection.collectedDateTimeDR[dateTime]
18SPM-18Specimen Received Date/TimeDTM01Specimen.receivedTimeSpecimen.dateTime01
19SPM-19Specimen Expiration Date/TimeDTM01
20SPM-20Specimen AvailabilityID01Specimen.statusSpecimen.code01Yes/NoIndicator[AvailabilityStatus]
21SPM-21Specimen Reject ReasonCWE0-1SpecimenRejectReasonThis should be mapped top the correct ServiceRequest.dataAbsentReason as the speciman is rejected in the context of a particular test given the specimen condition. Since the placement of the SPM in the message is not always clear as to which ORC/OBR it relates to, we cannot provide specific mapping beyond the vocabulary map.
22SPM-22Specimen QualityCWE01
23SPM-23Specimen AppropriatenessCWE01
24SPM-24Specimen ConditionCWE0-1Specimen.conditionSpecimen.CodeableConcept0-1CWE[CodeableConcept]SpecimenCondition
25SPM-25Specimen Current QuantityCQ01
26SPM-26Number of Specimen ContainersNM01
27SPM-27Container TypeCWE01Specimen.container.typeSpecimen.CodeableConcept01CWE[CodeableConcept]ContainerType
28SPM-28Container ConditionCWE01
29SPM-29Specimen Child RoleCWE01
30SPM-30Accession IDCX0-1Specimen.accessionIdentifierSpecimen.Identifier01CX[Identifier]
31SPM-31Other Specimen IDCX0-1Specimen.identifierSpecimen.Identifier0-1CX[Identifier]
32SPM-32Shipment IDEI01Specimen.identifierSpecimen.Identifier0-1EI[Identifier-Extension]
32SPM-32Shipment IDEI01Specimen.identifier.type.coding.codeassign: "SHIP"Specimen.code01
32SPM-32Shipment IDEI01Specimen.identifier.type.coding.systemSpecimen.uri01

Generated Narrative: ConceptMap segment-spm-to-specimen

Mapping from SPM to Specimen


Group 1 Mapping from unspecified code system to unspecified code system

Source CodeRelationshipTarget CodeComment
SPM-2 (Specimen ID)is equivalent toidentifier[1]
SPM-2 (Specimen ID)is equivalent toidentifier[2]
SPM-3 (Specimen Parent IDs)is equivalent toparent[1](Specimen.identifier[1])
SPM-3 (Specimen Parent IDs)is equivalent toparent[1](Specimen.identifier[2])
SPM-4 (Specimen Type)is equivalent totype
SPM-6 (Specimen Additives)is equivalent tocontainer.additiveCodeableConcept
SPM-7 (Specimen Collection Method)is equivalent tocollection.methodThis should not be populated in a message corresponding to a ServiceRequest (eg ORM)
SPM-8 (Specimen Source Site)is equivalent tocollection.bodySiteThis should not be populated in a message corresponding to a ServiceRequest (eg ORM)
SPM-12 (Specimen Collection Amount)is equivalent tocollection.quantity
SPM-14 (Specimen Description)is equivalent tonote(Annotation.text)
SPM-17 (Specimen Collection Date/Time)is equivalent tocollection.collectedPeriod
SPM-17 (Specimen Collection Date/Time)is equivalent tocollection.collectedDateTime
SPM-18 (Specimen Received Date/Time)is equivalent toreceivedTime
SPM-20 (Specimen Availability)is equivalent tostatus
SPM-24 (Specimen Condition)is equivalent tocondition
SPM-27 (Container Type)is equivalent tocontainer.type
SPM-30 (Accession ID)is equivalent toaccessionIdentifier
SPM-31 (Other Specimen ID)is equivalent toidentifier[2]
SPM-32 (Shipment ID)is equivalent toidentifier[3]
SPM-32 (Shipment ID)is equivalent toidentifier[3].type.coding.code
SPM-32 (Shipment ID)is equivalent toidentifier[3].type.coding.system (= "http://terminology.hl7.org/CodeSystem/v2-0203")

Notes: