StandardPatientHealthRecordIG, published by MITRE. This is not an authorized publication; it is the continuous build for version 0.4.4). This version is based on the current content of https://github.com/HL7/standard-patient-health-record-ig/ and changes regularly. See the Directory of published versions
Physiology Simulations
Recurring challenges with designing PHR apps include figuring out which data to include (all of it? just the hospital data? fitness data?) and then finding suitable test data. This implementation guide does not purport to provide algorithms or workflows for every medical category. However, we can reference the Synthea synthetic data generator, and recommend that PHR developers use it’s algorithms for generating sample data for various medical conditions.
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Medical Domains
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| Domain | Value Sets | File Types | Avg. File Size | Frequency | Diagnostic Algorithm |
|---|---|---|---|---|---|
| Genomics | Sequence Type Human Chromosome |
FASTQ, BAM, VCFs | ~1TB | Pharmacogenenomics Personalized Medicine |
|
| Radiology | AcquisitionModality Laterality SNOMED CT Body Structures |
DICOM, JPG | ~1GB | per study | Surgical Planning Autosegmentation Medication Dosage |
| Embryology | ~100KB | ||||
| Dermatology | ~2MB | ||||
| Endocrinology | ~100KB | ||||
| Pediatrics | ~100KB | ||||
| Metabolism & Biometrics | ~100KB | ||||
| Neurology | ~100KB | ||||
| Cardiology & Hemodynamics | ~5GB | ||||
| Pulmonology | |||||
| Kinesthesiology | |||||
| Immunology | ~100KB | ||||
| Virology (COVID19) | ~20KB | ||||
| Gastroenterology | ~4GB | ||||
| Obstetrics | ~100MB | ||||
| Pregnancy | ~100MB | ||||
| Gynocology | |||||
| Andrology | |||||
| Urology | |||||
| Healthy Aging | |||||
| Hospice Care |
Synthetic Data Generator Installation
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# download synthea
git clone https://github.com/synthetichealth/synthea
# go into the cloned directory
cd synthea
# build the app
./gradlew build check test
References
SyntheaTM Patient Generator
Simulacres Et Simulation - Jean Baudrillard