minimal Common Oncology Data Elements (mCODE) Implementation Guide, published by HL7 International / Clinical Interoperability Council. This guide is not an authorized publication; it is the continuous build for version 4.0.0-ballot built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/fhir-mCODE-ig/ and changes regularly. See the Directory of published versions
Active as of 2024-10-30 | Maturity Level: 1 |
<ValueSet xmlns="http://hl7.org/fhir">
<id value="mcode-human-specimen-type-vs"/>
<text>
<status value="extensions"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ValueSet mcode-human-specimen-type-vs</b></p><a name="mcode-human-specimen-type-vs"> </a><a name="hcmcode-human-specimen-type-vs"> </a><a name="mcode-human-specimen-type-vs-en-US"> </a><ul><li>Include these codes as defined in <a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html"><code>http://terminology.hl7.org/CodeSystem/v2-0487</code></a><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-AMN">AMN</a></td><td>Amniotic fluid</td><td>Amniotic fluid</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-BIFL">BIFL</a></td><td>Bile Fluid</td><td>Bile Fluid</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-BLD">BLD</a></td><td>Whole blood</td><td>Whole blood</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-BLDA">BLDA</a></td><td>Blood arterial</td><td>Blood arterial</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-BLDCO">BLDCO</a></td><td>Cord blood</td><td>Cord blood</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-BLDV">BLDV</a></td><td>Blood venous</td><td>Blood venous</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-BON">BON</a></td><td>Bone</td><td>Bone</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-CSERU">CSERU</a></td><td>Serum, Convalescent</td><td>Serum, Convalescent</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-CSF">CSF</a></td><td>Cerebral spinal fluid</td><td>Cerebral spinal fluid</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-CVM">CVM</a></td><td>Cervical Mucus</td><td>Cervical Mucus</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-DUFL">DUFL</a></td><td>Duodenal fluid</td><td>Duodenal fluid</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-FBLOOD">FBLOOD</a></td><td>Blood, Fetal</td><td>Blood, Fetal</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-FGA">FGA</a></td><td>Fluid, Abdomen</td><td>Fluid, Abdomen</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-GENV">GENV</a></td><td>Genital vaginal</td><td>Genital vaginal</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-HYDC">HYDC</a></td><td>Fluid, Hydrocele</td><td>Fluid, Hydrocele</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-KIDFLD">KIDFLD</a></td><td>Fluid, Kidney</td><td>Fluid, Kidney</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-LSAC">LSAC</a></td><td>Fluid, Lumbar Sac</td><td>Fluid, Lumbar Sac</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-MAR">MAR</a></td><td>Marrow</td><td>Marrow</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-PAFL">PAFL</a></td><td>Pancreatic fluid</td><td>Pancreatic fluid</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-PCFL">PCFL</a></td><td>Fluid, Pericardial</td><td>Fluid, Pericardial</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-PLC">PLC</a></td><td>Placenta</td><td>Placenta</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-PLR">PLR</a></td><td>Pleural fluid (thoracentesis fluid)</td><td>Pleural fluid (thoracentesis fluid)</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-SAL">SAL</a></td><td>Saliva</td><td>Saliva</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-SKN">SKN</a></td><td>Skin</td><td>Skin</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-SMN">SMN</a></td><td>Seminal fluid</td><td>Seminal fluid</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-SNV">SNV</a></td><td>Fluid, synovial (Joint fluid)</td><td>Fluid, synovial (Joint fluid)</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-SPT">SPT</a></td><td>Sputum</td><td>Sputum</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-TISS">TISS</a></td><td>Tissue</td><td>Tissue</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-TUMOR">TUMOR</a></td><td>Tumor</td><td>Tumor</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-VITF">VITF</a></td><td>Vitreous Fluid</td><td>Vitreous Fluid</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-WND">WND</a></td><td>Wound</td><td>Wound</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-UR">UR</a></td><td>Urine</td><td>Urine</td></tr><tr><td><a href="http://terminology.hl7.org/5.0.0/CodeSystem-v2-0487.html#v2-0487-STL">STL</a></td><td>Stool = Fecal</td><td>Stool = Fecal</td></tr></table></li></ul></div>
</text>
<extension
url="http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm">
<valueInteger value="1"/>
</extension>
<extension
url="http://hl7.org/fhir/StructureDefinition/structuredefinition-wg">
<valueCode value="cic"/>
</extension>
<url
value="http://hl7.org/fhir/us/mcode/ValueSet/mcode-human-specimen-type-vs"/>
<identifier>
<system value="urn:ietf:rfc:3986"/>
<value value="urn:oid:2.16.840.1.113883.4.642.40.15.48.38"/>
</identifier>
<version value="4.0.0-ballot"/>
<name value="HumanSpecimenTypeVS"/>
<title value="Human Specimen Type Value Set"/>
<status value="active"/>
<experimental value="false"/>
<date value="2024-10-30T15:45:56+00:00"/>
<publisher value="HL7 International / Clinical Interoperability Council"/>
<contact>
<name value="HL7 International / Clinical Interoperability Council"/>
<telecom>
<system value="url"/>
<value value="http://www.hl7.org/Special/committees/cic"/>
</telecom>
<telecom>
<system value="email"/>
<value value="ciclist@lists.HL7.org"/>
</telecom>
</contact>
<description
value="Specimen taken from a human subject. The values include the subset of codes in the HL7 Specimen Type code system (https://terminology.hl7.org/CodeSystem-v2-0487.html) representing body sites and body fluids likely to be used in tumor marker or genomic testing. The most specific term available should be used, for example, for arterial blood, use #BLDA not #BLD."/>
<jurisdiction>
<coding>
<system value="urn:iso:std:iso:3166"/>
<code value="US"/>
<display value="United States of America"/>
</coding>
</jurisdiction>
<compose>
<include>
<system value="http://terminology.hl7.org/CodeSystem/v2-0487"/>
<concept>
<code value="AMN"/>
<display value="Amniotic fluid"/>
</concept>
<concept>
<code value="BIFL"/>
<display value="Bile Fluid"/>
</concept>
<concept>
<code value="BLD"/>
<display value="Whole blood"/>
</concept>
<concept>
<code value="BLDA"/>
<display value="Blood arterial"/>
</concept>
<concept>
<code value="BLDCO"/>
<display value="Cord blood"/>
</concept>
<concept>
<code value="BLDV"/>
<display value="Blood venous"/>
</concept>
<concept>
<code value="BON"/>
<display value="Bone"/>
</concept>
<concept>
<code value="CSERU"/>
<display value="Serum, Convalescent"/>
</concept>
<concept>
<code value="CSF"/>
<display value="Cerebral spinal fluid"/>
</concept>
<concept>
<code value="CVM"/>
<display value="Cervical Mucus"/>
</concept>
<concept>
<code value="DUFL"/>
<display value="Duodenal fluid"/>
</concept>
<concept>
<code value="FBLOOD"/>
<display value="Blood, Fetal"/>
</concept>
<concept>
<code value="FGA"/>
<display value="Fluid, Abdomen"/>
</concept>
<concept>
<code value="GENV"/>
<display value="Genital vaginal"/>
</concept>
<concept>
<code value="HYDC"/>
<display value="Fluid, Hydrocele"/>
</concept>
<concept>
<code value="KIDFLD"/>
<display value="Fluid, Kidney"/>
</concept>
<concept>
<code value="LSAC"/>
<display value="Fluid, Lumbar Sac"/>
</concept>
<concept>
<code value="MAR"/>
<display value="Marrow"/>
</concept>
<concept>
<code value="PAFL"/>
<display value="Pancreatic fluid"/>
</concept>
<concept>
<code value="PCFL"/>
<display value="Fluid, Pericardial"/>
</concept>
<concept>
<code value="PLC"/>
<display value="Placenta"/>
</concept>
<concept>
<code value="PLR"/>
<display value="Pleural fluid (thoracentesis fluid)"/>
</concept>
<concept>
<code value="SAL"/>
<display value="Saliva"/>
</concept>
<concept>
<code value="SKN"/>
<display value="Skin"/>
</concept>
<concept>
<code value="SMN"/>
<display value="Seminal fluid"/>
</concept>
<concept>
<code value="SNV"/>
<display value="Fluid, synovial (Joint fluid)"/>
</concept>
<concept>
<code value="SPT"/>
<display value="Sputum"/>
</concept>
<concept>
<code value="TISS"/>
<display value="Tissue"/>
</concept>
<concept>
<code value="TUMOR"/>
<display value="Tumor"/>
</concept>
<concept>
<code value="VITF"/>
<display value="Vitreous Fluid"/>
</concept>
<concept>
<code value="WND"/>
<display value="Wound"/>
</concept>
<concept>
<code value="UR"/>
<display value="Urine"/>
</concept>
<concept>
<code value="STL"/>
<display value="Stool = Fecal"/>
</concept>
</include>
</compose>
</ValueSet>