Clinical Genomics Resource Incubator
0.1.0-ci-build - CI Build International flag

Clinical Genomics Resource Incubator, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/cg-incubator/ and changes regularly. See the Directory of published versions

: Amino Acid 3-letter Ambiguous Symbols ValueSet

Page standards status: Informative Maturity Level: 0

Raw xml | Download


<ValueSet xmlns="http://hl7.org/fhir">
  <id value="amino-acid-3letter-ambiguous"/>
  <meta>
    <lastUpdated value="2026-03-23T00:00:00Z"/>
    <profile
             value="http://hl7.org/fhir/StructureDefinition/shareablevalueset"/>
  </meta>
  <language value="en"/>
  <text>
    <status value="extensions"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ValueSet amino-acid-3letter-ambiguous</b></p><a name="amino-acid-3letter-ambiguous"> </a><a name="hcamino-acid-3letter-ambiguous"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Last updated: 2026-03-23 00:00:00+0000</p><p style="margin-bottom: 0px">Profile: <a href="http://hl7.org/fhir/R5/shareablevalueset.html">Shareable ValueSet</a></p></div><ul><li>Include these codes as defined in <a href="CodeSystem-amino-acid.html"><code>http://hl7.org/fhir/uv/cg-incubator/CodeSystem/amino-acid</code></a><span title="Version is not explicitly stated, which means it is fixed to the version provided in this specification"> version &#x1F4E6;0.1.0-ci-build</span><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Ala">Ala</a></td><td style="color: #cccccc">Alanine</td><td>Ala</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Asx">Asx</a></td><td style="color: #cccccc">Aspartic acid or asparagine</td><td>Asp or Asn</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Cys">Cys</a></td><td style="color: #cccccc">Cysteine</td><td>Cys</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Asp">Asp</a></td><td style="color: #cccccc">Aspartic acid</td><td>Asp</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Glu">Glu</a></td><td style="color: #cccccc">Glutamic acid</td><td>Glu</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Phe">Phe</a></td><td style="color: #cccccc">Phenylalanine</td><td>Phe</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Gly">Gly</a></td><td style="color: #cccccc">Glycine</td><td>Gly</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-His">His</a></td><td style="color: #cccccc">Histidine</td><td>His</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Ile">Ile</a></td><td style="color: #cccccc">Isoleucine</td><td>Ile</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Lys">Lys</a></td><td style="color: #cccccc">Lysine</td><td>Lys</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Leu">Leu</a></td><td style="color: #cccccc">Leucine</td><td>Leu</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Met">Met</a></td><td style="color: #cccccc">Methionine</td><td>Met</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Asn">Asn</a></td><td style="color: #cccccc">Asparagine</td><td>Asn</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Pro">Pro</a></td><td style="color: #cccccc">Proline</td><td>Pro</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Gln">Gln</a></td><td style="color: #cccccc">Glutamine</td><td>Gln</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Arg">Arg</a></td><td style="color: #cccccc">Arginine</td><td>Arg</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Ser">Ser</a></td><td style="color: #cccccc">Serine</td><td>Ser</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Thr">Thr</a></td><td style="color: #cccccc">Threonine</td><td>Thr</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Val">Val</a></td><td style="color: #cccccc">Valine</td><td>Val</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Trp">Trp</a></td><td style="color: #cccccc">Tryptophan</td><td>Trp</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Tyr">Tyr</a></td><td style="color: #cccccc">Tyrosine</td><td>Tyr</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Sec">Sec</a></td><td style="color: #cccccc">Selenocysteine</td><td>Sec</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Xaa">Xaa</a></td><td style="color: #cccccc">Unknown or other amino acid</td><td>Any amino acid</td></tr><tr><td><a href="CodeSystem-amino-acid.html#amino-acid-Glx">Glx</a></td><td style="color: #cccccc">Glutamic acid or glutamine</td><td>Glu or Gln</td></tr></table></li></ul></div>
  </text>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-wg">
    <valueCode value="cg"/>
  </extension>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status">
    <valueCode value="informative"/>
  </extension>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm">
    <valueInteger value="0"/>
  </extension>
  <url
       value="http://hl7.org/fhir/uv/cg-incubator/ValueSet/amino-acid-3letter-ambiguous"/>
  <version value="0.1.0-ci-build"/>
  <name value="AminoAcid3LetterAmbiguous"/>
  <title value="Amino Acid 3-letter Ambiguous Symbols ValueSet"/>
  <status value="draft"/>
  <experimental value="true"/>
  <date value="2026-03-23"/>
  <publisher value="HL7 International / Clinical Genomics"/>
  <contact>
    <name value="HL7 International / Clinical Genomics"/>
    <telecom>
      <system value="url"/>
      <value value="http://www.hl7.org/Special/committees/clingenomics"/>
    </telecom>
    <telecom>
      <system value="email"/>
      <value value="clingenomics@lists.hl7.org"/>
    </telecom>
  </contact>
  <description
               value="Three-letter symbols for amino acids including ambiguous symbols (Ala, Asx, Cys, Asp, Glu, Phe, Gly, His, Ile, Lys, Leu, Met, Asn, Pro, Gln, Arg, Ser, Thr, Val, Trp, Tyr, Sec, Xaa, Glx)."/>
  <jurisdiction>
    <coding>
      <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/>
      <code value="001"/>
      <display value="World"/>
    </coding>
  </jurisdiction>
  <compose>
    <include>
      <system
              value="http://hl7.org/fhir/uv/cg-incubator/CodeSystem/amino-acid"/>
      <concept>
        <code value="Ala"/>
      </concept>
      <concept>
        <code value="Asx"/>
      </concept>
      <concept>
        <code value="Cys"/>
      </concept>
      <concept>
        <code value="Asp"/>
      </concept>
      <concept>
        <code value="Glu"/>
      </concept>
      <concept>
        <code value="Phe"/>
      </concept>
      <concept>
        <code value="Gly"/>
      </concept>
      <concept>
        <code value="His"/>
      </concept>
      <concept>
        <code value="Ile"/>
      </concept>
      <concept>
        <code value="Lys"/>
      </concept>
      <concept>
        <code value="Leu"/>
      </concept>
      <concept>
        <code value="Met"/>
      </concept>
      <concept>
        <code value="Asn"/>
      </concept>
      <concept>
        <code value="Pro"/>
      </concept>
      <concept>
        <code value="Gln"/>
      </concept>
      <concept>
        <code value="Arg"/>
      </concept>
      <concept>
        <code value="Ser"/>
      </concept>
      <concept>
        <code value="Thr"/>
      </concept>
      <concept>
        <code value="Val"/>
      </concept>
      <concept>
        <code value="Trp"/>
      </concept>
      <concept>
        <code value="Tyr"/>
      </concept>
      <concept>
        <code value="Sec"/>
      </concept>
      <concept>
        <code value="Xaa"/>
      </concept>
      <concept>
        <code value="Glx"/>
      </concept>
    </include>
  </compose>
</ValueSet>