Clinical Genomics Resource Incubator
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Clinical Genomics Resource Incubator, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 0.1.0-ci-build built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/cg-incubator/ and changes regularly. See the Directory of published versions

: Amino Acid 3-letter Ambiguous Symbols ValueSet

Page standards status: Informative Maturity Level: 0

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:ValueSet ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "amino-acid-3letter-ambiguous"] ; # 
  fhir:meta [
fhir:lastUpdated [ fhir:v "2026-03-23T00:00:00Z"^^xsd:dateTime ] ;
    ( fhir:profile [
fhir:v "http://hl7.org/fhir/StructureDefinition/shareablevalueset"^^xsd:anyURI ;
fhir:l <http://hl7.org/fhir/StructureDefinition/shareablevalueset>     ] )
  ] ; # 
  fhir:language [ fhir:v "en"] ; # 
  fhir:text [
fhir:status [ fhir:v "extensions" ] ;
fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet amino-acid-3letter-ambiguous</b></p><a name=\"amino-acid-3letter-ambiguous\"> </a><a name=\"hcamino-acid-3letter-ambiguous\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Last updated: 2026-03-23 00:00:00+0000</p><p style=\"margin-bottom: 0px\">Profile: <a href=\"http://hl7.org/fhir/R5/shareablevalueset.html\">Shareable ValueSet</a></p></div><ul><li>Include these codes as defined in <a href=\"CodeSystem-amino-acid.html\"><code>http://hl7.org/fhir/uv/cg-incubator/CodeSystem/amino-acid</code></a><span title=\"Version is not explicitly stated, which means it is fixed to the version provided in this specification\"> version ?0.1.0-ci-build</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Ala\">Ala</a></td><td style=\"color: #cccccc\">Alanine</td><td>Ala</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Asx\">Asx</a></td><td style=\"color: #cccccc\">Aspartic acid or asparagine</td><td>Asp or Asn</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Cys\">Cys</a></td><td style=\"color: #cccccc\">Cysteine</td><td>Cys</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Asp\">Asp</a></td><td style=\"color: #cccccc\">Aspartic acid</td><td>Asp</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Glu\">Glu</a></td><td style=\"color: #cccccc\">Glutamic acid</td><td>Glu</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Phe\">Phe</a></td><td style=\"color: #cccccc\">Phenylalanine</td><td>Phe</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Gly\">Gly</a></td><td style=\"color: #cccccc\">Glycine</td><td>Gly</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-His\">His</a></td><td style=\"color: #cccccc\">Histidine</td><td>His</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Ile\">Ile</a></td><td style=\"color: #cccccc\">Isoleucine</td><td>Ile</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Lys\">Lys</a></td><td style=\"color: #cccccc\">Lysine</td><td>Lys</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Leu\">Leu</a></td><td style=\"color: #cccccc\">Leucine</td><td>Leu</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Met\">Met</a></td><td style=\"color: #cccccc\">Methionine</td><td>Met</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Asn\">Asn</a></td><td style=\"color: #cccccc\">Asparagine</td><td>Asn</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Pro\">Pro</a></td><td style=\"color: #cccccc\">Proline</td><td>Pro</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Gln\">Gln</a></td><td style=\"color: #cccccc\">Glutamine</td><td>Gln</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Arg\">Arg</a></td><td style=\"color: #cccccc\">Arginine</td><td>Arg</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Ser\">Ser</a></td><td style=\"color: #cccccc\">Serine</td><td>Ser</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Thr\">Thr</a></td><td style=\"color: #cccccc\">Threonine</td><td>Thr</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Val\">Val</a></td><td style=\"color: #cccccc\">Valine</td><td>Val</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Trp\">Trp</a></td><td style=\"color: #cccccc\">Tryptophan</td><td>Trp</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Tyr\">Tyr</a></td><td style=\"color: #cccccc\">Tyrosine</td><td>Tyr</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Sec\">Sec</a></td><td style=\"color: #cccccc\">Selenocysteine</td><td>Sec</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Xaa\">Xaa</a></td><td style=\"color: #cccccc\">Unknown or other amino acid</td><td>Any amino acid</td></tr><tr><td><a href=\"CodeSystem-amino-acid.html#amino-acid-Glx\">Glx</a></td><td style=\"color: #cccccc\">Glutamic acid or glutamine</td><td>Glu or Gln</td></tr></table></li></ul></div>"^^rdf:XMLLiteral ]
  ] ; # 
  fhir:extension ( [
fhir:url [
fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg"^^xsd:anyURI ;
fhir:l <http://hl7.org/fhir/StructureDefinition/structuredefinition-wg>     ] ;
fhir:value [
a fhir:Code ;
fhir:v "cg"     ]
  ] [
fhir:url [
fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status"^^xsd:anyURI ;
fhir:l <http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status>     ] ;
fhir:value [
a fhir:Code ;
fhir:v "informative"     ]
  ] [
fhir:url [
fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm"^^xsd:anyURI ;
fhir:l <http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm>     ] ;
fhir:value [
a fhir:Integer ;
fhir:v 0     ]
  ] ) ; # 
  fhir:url [
fhir:v "http://hl7.org/fhir/uv/cg-incubator/ValueSet/amino-acid-3letter-ambiguous"^^xsd:anyURI ;
fhir:l <http://hl7.org/fhir/uv/cg-incubator/ValueSet/amino-acid-3letter-ambiguous>
  ] ; # 
  fhir:version [ fhir:v "0.1.0-ci-build"] ; # 
  fhir:name [ fhir:v "AminoAcid3LetterAmbiguous"] ; # 
  fhir:title [ fhir:v "Amino Acid 3-letter Ambiguous Symbols ValueSet"] ; # 
  fhir:status [ fhir:v "draft"] ; # 
  fhir:experimental [ fhir:v true] ; # 
  fhir:date [ fhir:v "2026-03-23"^^xsd:date] ; # 
  fhir:publisher [ fhir:v "HL7 International / Clinical Genomics"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "HL7 International / Clinical Genomics" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "http://www.hl7.org/Special/committees/clingenomics" ]     ] [
fhir:system [ fhir:v "email" ] ;
fhir:value [ fhir:v "clingenomics@lists.hl7.org" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "Three-letter symbols for amino acids including ambiguous symbols (Ala, Asx, Cys, Asp, Glu, Phe, Gly, His, Ile, Lys, Leu, Met, Asn, Pro, Gln, Arg, Ser, Thr, Val, Trp, Tyr, Sec, Xaa, Glx)."] ; # 
  fhir:jurisdiction ( [
    ( fhir:coding [
fhir:system [
fhir:v "http://unstats.un.org/unsd/methods/m49/m49.htm"^^xsd:anyURI ;
fhir:l <http://unstats.un.org/unsd/methods/m49/m49.htm>       ] ;
fhir:code [ fhir:v "001" ] ;
fhir:display [ fhir:v "World" ]     ] )
  ] ) ; # 
  fhir:compose [
    ( fhir:include [
fhir:system [
fhir:v "http://hl7.org/fhir/uv/cg-incubator/CodeSystem/amino-acid"^^xsd:anyURI ;
fhir:l <http://hl7.org/fhir/uv/cg-incubator/CodeSystem/amino-acid>       ] ;
      ( fhir:concept [
fhir:code [ fhir:v "Ala" ]       ] [
fhir:code [ fhir:v "Asx" ]       ] [
fhir:code [ fhir:v "Cys" ]       ] [
fhir:code [ fhir:v "Asp" ]       ] [
fhir:code [ fhir:v "Glu" ]       ] [
fhir:code [ fhir:v "Phe" ]       ] [
fhir:code [ fhir:v "Gly" ]       ] [
fhir:code [ fhir:v "His" ]       ] [
fhir:code [ fhir:v "Ile" ]       ] [
fhir:code [ fhir:v "Lys" ]       ] [
fhir:code [ fhir:v "Leu" ]       ] [
fhir:code [ fhir:v "Met" ]       ] [
fhir:code [ fhir:v "Asn" ]       ] [
fhir:code [ fhir:v "Pro" ]       ] [
fhir:code [ fhir:v "Gln" ]       ] [
fhir:code [ fhir:v "Arg" ]       ] [
fhir:code [ fhir:v "Ser" ]       ] [
fhir:code [ fhir:v "Thr" ]       ] [
fhir:code [ fhir:v "Val" ]       ] [
fhir:code [ fhir:v "Trp" ]       ] [
fhir:code [ fhir:v "Tyr" ]       ] [
fhir:code [ fhir:v "Sec" ]       ] [
fhir:code [ fhir:v "Xaa" ]       ] [
fhir:code [ fhir:v "Glx" ]       ] )     ] )
  ] . #