CDA to FHIR Maps
0.1.0 - ci-build
CDA to FHIR Maps
0.1.0 - ci-build
CDA to FHIR Maps, published by HL7 Italy. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-it/cda2fhir/ and changes regularly. See the Directory of published versions
| Official URL: http://hl7.it/fhir/cda2fhir/StructureMap/cda2fhirRadReport | Version: 0.1.0 | |||
| Draft as of 2024-04-11 | Computable Name: cda2fhirRadReport | |||
map "http://hl7.it/fhir/cda2fhir/StructureMap/cda2fhirRadReport" = "cda2fhirRadReport"
uses "http://hl7.org/fhir/cda/StructureDefinition/ClinicalDocument" alias ClinicalDocument as source
uses "http://hl7.org/fhir/cda/StructureDefinition/AssignedAuthor" alias AssignedAuthor as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/AssignedEntity" alias AssignedEntity as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/AssociatedEntity" alias AssociatedEntity as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/CustodianOrganization" alias CustodianOrganization as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/OrganizationPartOf" alias OrganizationPartOf as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/Organization" alias rapresentedOrganization as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/Section" alias Section as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/PatientRole" alias PatientRole as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/AD" alias AD as source
uses "http://hl7.org/fhir/StructureDefinition/Bundle" alias Bundle as target
uses "http://hl7.org/fhir/StructureDefinition/Composition" alias Composition as produced
uses "http://hl7.org/fhir/StructureDefinition/Patient" alias Patient as produced
uses "http://hl7.org/fhir/StructureDefinition/Encounter" alias Encounter as produced
uses "http://hl7.org/fhir/StructureDefinition/Person" alias Patient as produced
uses "http://hl7.org/fhir/StructureDefinition/List" alias List as produced
uses "http://hl7.org/fhir/StructureDefinition/Practitioner" alias Practitioner as produced
uses "http://hl7.org/fhir/StructureDefinition/Organization" alias Organization as produced
uses "http://hl7.org/fhir/cda/StructureDefinition/Act" alias Act as produced
uses "http://hl7.org/fhir/cda/StructureDefinition/IVL-PQ" alias IVL_PQ as source
uses "http://hl7.org/fhir/cda/StructureDefinition/PQ" alias PQ as source
uses "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" alias SimpleQuantity as target
imports "http://hl7.it/fhir/cda2fhir/StructureMap/cda2fhirDataTypes"
imports "http://hl7.it/fhir/cda2fhir/StructureMap/cda2fhirHeader"
group CdaToBundle(source cda : ClinicalDocument, target bundle : Bundle) {
cda -> bundle.entry as e, e.request = create('BackboneElement') as request, request.method = 'POST', e.resource = create('Composition') as composition, composition.id = uuid() as uuid1, e.fullUrl = append('https://example/Composition/', uuid1), request.url = 'Composition', bundle.entry as e2, e2.request = create('BackboneElement') as requestPAT, requestPAT.method = 'PUT', e2.resource = create('Patient') as patient, patient.id = uuid() as uuid2, e2.fullUrl = append('https://example/Patient/', uuid2), bundle.entry as e3, e3.request = create('BackboneElement') as request, request.method = 'POST', e3.resource = create('Encounter') as encounter, encounter.id = uuid() as uuid3, e3.fullUrl = append('https://example/Encounter/', uuid3), request.url = 'Encounter', bundle.entry as e4, e4.request = create('BackboneElement') as request, request.method = 'POST', e4.resource = create('DocumentReference') as DocumentReference, DocumentReference.id = uuid() as uuid4, e4.fullUrl = append('https://example/DocumentReference/', uuid4), request.url = 'DocumentReference' then {
cda then ClinicalDocumentToBundle(cda, patient, composition, encounter, bundle, DocumentReference) "cdatobundle";
cda.recordTarget as recordTarget then {
recordTarget.patientRole as patient then {
patient.id as id -> patient.identifier as identifier then {
id.root as r -> identifier.system = translate(r, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri') "root1";
id.extension as ext1 -> identifier.value = ext1 "value";
id.assigningAuthorityName as s -> identifier.assigner as a, a.display = s;
} "idfr";
patient.id as id where (root = '2.16.840.1.113883.2.9.4.3.2') or (root = '2.16.840.1.113883.2.9.4.3.7') or (root = '2.16.840.1.113883.2.9.4.3.3') or (root = '2.16.840.1.113883.2.9.4.3.17') or (root = '2.16.840.1.113883.2.9.4.3.18') or (root = '2.16.840.1.113883.2.9.2.10.4.1.1') or (root = '2.16.840.1.113883.2.9.2.20.4.1.1') or (root = '2.16.840.1.113883.2.9.2.30.4.1.1') or (root = '2.16.840.1.113883.2.9.2.41.4.1.1') or (root = '2.16.840.1.113883.2.9.2.42.4.1.1') or (root = '2.16.840.1.113883.2.9.2.50.4.1.1') or (root = '2.16.840.1.113883.2.9.2.60.4.1.1') or (root = '2.16.840.1.113883.2.9.2.70.4.1.1') or (root = '2.16.840.1.113883.2.9.2.80.4.1.1') or (root = '2.16.840.1.113883.2.9.2.90.4.1.1') or (root = '2.16.840.1.113883.2.9.2.100.4.1.1') or (root = '2.16.840.1.113883.2.9.2.110.4.1.1') or (root = '2.16.840.1.113883.2.9.2.120.4.1.1') or (root = '2.16.840.1.113883.2.9.2.130.4.1.1') or (root = '2.16.840.1.113883.2.9.2.140.4.1.1') or (root = '2.16.840.1.113883.2.9.2.150.4.1.1') or (root = '2.16.840.1.113883.2.9.2.160.4.1.1') or (root = '2.16.840.1.113883.2.9.2.170.4.1.1') or (root = '2.16.840.1.113883.2.9.2.180.4.1.1') or (root = '2.16.840.1.113883.2.9.2.190.4.1.1') or (root = '2.16.840.1.113883.2.9.2.200.4.1.1') or (root = '2.16.840.1.113883.2.9.2.10.4.1') or (root = '2.16.840.1.113883.2.9.2.20.4.1') or (root = '2.16.840.1.113883.2.9.2.30.4.1') or (root = '2.16.840.1.113883.2.9.2.41.4.1') or (root = '2.16.840.1.113883.2.9.2.42.4.1') or (root = '2.16.840.1.113883.2.9.2.50.4.1') or (root = '2.16.840.1.113883.2.9.2.60.4.1') or (root = '2.16.840.1.113883.2.9.2.70.4.1') or (root = '2.16.840.1.113883.2.9.2.80.4.1') or (root = '2.16.840.1.113883.2.9.2.90.4.1') or (root = '2.16.840.1.113883.2.9.2.100.4.1') or (root = '2.16.840.1.113883.2.9.2.110.4.1') or (root = '2.16.840.1.113883.2.9.2.120.4.1') or (root = '2.16.840.1.113883.2.9.2.130.4.1') or (root = '2.16.840.1.113883.2.9.2.140.4.1') or (root = '2.16.840.1.113883.2.9.2.150.4.1') or (root = '2.16.840.1.113883.2.9.2.160.4.1') or (root = '2.16.840.1.113883.2.9.2.170.4.1') or (root = '2.16.840.1.113883.2.9.2.180.4.1') or (root = '2.16.840.1.113883.2.9.2.190.4.1') or (root = '2.16.840.1.113883.2.9.2.200.4.1') or (root = '2.16.840.1.113883.2.9.4.3.15') then {
id.extension as ext -> requestPAT.url = append('Patient?identifier=', ext) "UUID";
} "ext";
} "recPat";
} "patient";
} "ClinicalDocumentToBody";
}
group ClinicalDocumentToBundle(source cda : ClinicalDocument, target patient : Patient, target composition : Composition, target encounter : Encounter, target bundle : Bundle, target DocumentReference : DocumentReference) {
cda -> bundle.id = uuid() "id";
cda.id -> bundle.identifier "identifier";
cda -> bundle.type = 'transaction' "type";
cda -> bundle.timestamp = (timestamp.now()) "date";
cda then ClinicalDocumentComposition(cda, composition, patient, encounter, bundle, DocumentReference) "composition";
cda -> bundle.entry as e, e.request = create('BackboneElement') as request, request.method = 'POST', e.resource = create('DiagnosticReport') as diagnosticReport, diagnosticReport.id = uuid() as uuid1, e.fullUrl = append('https://example/DiagnosticReport/', uuid1), request.url = 'DiagnosticReport' then {
cda.code -> diagnosticReport.code "diagnosticCode";
cda -> diagnosticReport.status = 'registered' "stats";
cda.component as component then {
component.structuredBody as body then {
body.component as component then {
component.section as srcSection then {
srcSection.code -> composition.section as tgtSection then ClinicalDocumentSection(cda, srcSection, patient, tgtSection, bundle, encounter, diagnosticReport);
};
};
} "body";
};
} "diagnostic";
}
group ClinicalDocumentSection(source cda : ClinicalDocument, source src : Section, target patient : Patient, target tgt, target bundle : Bundle, target enc : Encounter, target dReport : DiagnosticReport) {
src.title as t -> tgt.title = (t.dataString);
src.code -> tgt.code;
src -> tgt.entry = create('Reference') as reference, reference.reference = ('https://example/DiagnosticReport/' + %dReport.id) "reference";
src.entry as entry then {
src.text as cdaText -> tgt.text as fhirText then {
cdaText -> fhirText.status = 'generated' "narrativeStatus";
cdaText as t -> fhirText.div = t "narrativeText";
} "cdaText";
entry then DiagnosticReportFunction(src, entry, dReport, bundle, enc, patient) "dreport";
};
src where src.entry.exists().not() then DiagnosticReportFunction(src, cda, dReport, bundle, enc, patient) "narrative";
src.component as component then {
component.section as sec -> tgt.section as tgtSection then ClinicalDocumentSection(cda, sec, patient, tgtSection, bundle, enc, dReport);
};
}
group DiagnosticReportFunction(source section : section, source src : entry, target dReport : DiagnosticReport, target bundle : Bundle, target encounter : Encounter, target patient : Patient) {
src.act as act1 then {
section where (code.code = '121181') -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('ImagingStudy') as imageS, imageS.id = uuid() as uuid1, e1.fullUrl = append('https://example/ImagingStudy/', uuid1), request.url = 'ImagingStudy', dReport.imagingStudy = create('Reference') as reference, reference.reference = ('https://example/ImagingStudy/' + %imageS.id) then ImagingStudy(act1, section, imageS, patient, encounter) "imagingStudy";
section where (code.code = '48765-2') -> bundle.entry as e2, e2.request = create('BackboneElement') as request, request.method = 'POST', e2.resource = create('Observation') as obs1, obs1.id = uuid() as uuid2, e2.fullUrl = append('https://example/Observation/', uuid2), request.url = 'Observation', dReport.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs1.id) then {
section -> obs1.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
section -> obs1.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
section -> obs1.status = 'final' "STatusobse";
section.code -> obs1.code;
act1.statusCode as s then {
s.code as cos -> obs1.status = translate(cos, '#OBSstatus', 'code') "codeS";
} "status";
section -> bundle.entry as e4, e4.request = create('BackboneElement') as request, request.method = 'POST', e4.resource = create('List') as list1, list1.id = uuid() as uuid4, e4.fullUrl = append('https://example/List/', uuid4), request.url = 'List', obs1.focus = create('Reference') as reference, reference.reference = ('https://example/List/' + %list1.id) then {
section -> list1.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
section -> list1.status = 'current' "listatus";
section -> list1.mode = 'working' "lstmod";
section -> list1.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
src -> list1.entry as entryList1 then {
act1 -> bundle.entry as e5, e5.request = create('BackboneElement') as request, request.method = 'POST', e5.resource = create('AllergyIntolerance') as allergy, allergy.id = uuid() as uuid5, e5.fullUrl = append('https://example/AllergyIntolerance/', uuid5), request.url = 'AllergyIntolerance', entryList1.item = create('Reference') as reference, reference.reference = ('https://example/AllergyIntolerance/' + %allergy.id) then allergyFunction(act1, allergy, patient, encounter) "allergy";
} "item";
} "list";
} "allergyAct";
section where (code.code = '55111-9') -> bundle.entry as e3, e3.request = create('BackboneElement') as request, request.method = 'POST', e3.resource = create('Observation') as obs2, obs2.id = uuid() as uuid3, e3.fullUrl = append('https://example/Observation/', uuid3), request.url = 'Observation', dReport.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs2.id) then Observation(act1, patient, encounter, obs2, bundle) "observation";
};
src.observation as entryobs then {
section where (code.code = '11329-0') -> bundle.entry as e6, e6.request = create('BackboneElement') as request, request.method = 'POST', e6.resource = create('Observation') as obs6, obs6.id = uuid() as uuid6, e6.fullUrl = append('https://example/Observation/', uuid6), request.url = 'Observation', dReport.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs6.id) then {
section -> obs6.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
section -> obs6.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
section -> obs6.status = 'final' "tatusobse";
section.code -> obs6.code;
entryobs -> bundle.entry as e7, e7.request = create('BackboneElement') as request, request.method = 'POST', e7.resource = create('Condition') as condition1, condition1.id = uuid() as uuid7, e7.fullUrl = append('https://example/Condition/', uuid7), request.url = 'Condition', obs6.focus = create('Reference') as reference, reference.reference = ('https://example/Condition/' + %condition1.id) then ConditionFunction(entryobs, condition1, patient, encounter, bundle) "condition";
} "observationstclinica";
section where (code.code = '55114-3') -> bundle.entry as e9, e9.request = create('BackboneElement') as request, request.method = 'POST', e9.resource = create('Observation') as obs9, obs9.id = uuid() as uuid9, e9.fullUrl = append('https://example/Observation/', uuid9), request.url = 'Observation', dReport.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs9.id) then Observation(entryobs, patient, encounter, obs9, bundle) "precedentiEsami";
section where (code.code = '55109-3') -> bundle.entry as e8, e8.request = create('BackboneElement') as request, request.method = 'POST', e8.resource = create('Observation') as obs8, obs8.id = uuid() as uuid8, e8.fullUrl = append('https://example/Observation/', uuid8), request.url = 'Observation', dReport.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs8.id) then Observation(entryobs, patient, encounter, obs8, bundle) "complicanze";
section where (code.code = '18785-6') -> bundle.entry as e14, e14.request = create('BackboneElement') as request, request.method = 'POST', e14.resource = create('Observation') as obs14, obs14.id = uuid() as uuid14, e14.fullUrl = append('https://example/Observation/', uuid14), request.url = 'Observation', dReport.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs14.id) then Observation(entryobs, patient, encounter, obs14, bundle) "quesitoDiagnostico";
} "entryObs";
src.organizer as organizer then {
src -> bundle.entry as e10, e10.request = create('BackboneElement') as request, request.method = 'POST', e10.resource = create('Observation') as obs10, obs10.id = uuid() as uuid10, e10.fullUrl = append('https://example/Observation/', uuid10), request.url = 'Observation', dReport.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs10.id) then {
section -> obs10.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
section -> obs10.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
section -> obs10.status = 'final' "tatusobse";
section.code -> obs10.code "codeObs";
section -> bundle.entry as e11, e11.request = create('BackboneElement') as request, request.method = 'POST', e11.resource = create('List') as list11, list11.id = uuid() as uuid11, e11.fullUrl = append('https://example/List/', uuid11), request.url = 'List', obs10.focus = create('Reference') as reference, reference.reference = ('https://example/List/' + %list11.id) then {
section -> list11.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
section -> list11.status = 'current' "liststat";
section -> list11.mode = 'working' "listmd";
section -> list11.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
organizer -> list11.entry as entryList2 then {
organizer -> bundle.entry as e12, e12.request = create('BackboneElement') as request, request.method = 'POST', e12.resource = create('FamilyMemberHistory') as familyMember, familyMember.id = uuid() as uuid12, e12.fullUrl = append('https://example/FamilyMemberHistory/', uuid12), request.url = 'FamilyMemberHistory', entryList2.item = create('Reference') as reference, reference.reference = ('https://example/FamilyMemberHistory/' + %familyMember.id) then FamilyMemberFunction(organizer, familyMember, patient) "family";
} "org";
} "List";
} "entryOrganizer";
};
section where section.entry.exists().not() then {
section where (code.code = '48765-2') -> bundle.entry as e2, e2.request = create('BackboneElement') as request, request.method = 'POST', e2.resource = create('Observation') as obs1, obs1.id = uuid() as uuid2, e2.fullUrl = append('https://example/Observation/', uuid2), request.url = 'Observation', dReport.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs1.id) then {
section -> obs1.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
section -> obs1.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
section -> obs1.status = 'final' "STatusobse";
section.code -> obs1.code;
section.statusCode as s then {
s.code as cos -> obs1.status = translate(cos, '#OBSstatus', 'code') "codeS";
} "status";
section.text as text -> bundle.entry as e5, e5.request = create('BackboneElement') as request, request.method = 'POST', e5.resource = create('AllergyIntolerance') as allergy, allergy.id = uuid() as uuid5, e5.fullUrl = append('https://example/AllergyIntolerance/', uuid5), request.url = 'AllergyIntolerance', obs1.focus = create('Reference') as reference, reference.reference = ('https://example/AllergyIntolerance/' + %allergy.id) then {
section -> allergy.patient = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
section -> allergy.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
section -> allergy.clinicalStatus as clinicalStatus then {
section -> clinicalStatus.coding = create('Coding') as coding then {
section -> coding.code = 'active' "code";
section -> coding.system = 'http://terminology.hl7.org/CodeSystem/allergyintolerance-clinical' "system";
} "coding";
} "status";
text -> allergy.note as note then {
text as t -> note.text = create('string') as textNote then EDstring(t, textNote) "note";
} "narrative";
} "allergytext";
} "allergyAct";
section where (code.code = '55110-1').not() or (code.code = '11329-0').not() then {
section.text as text -> bundle.entry as e13, e13.request = create('BackboneElement') as request, request.method = 'POST', e13.resource = create('Observation') as obs13, obs13.id = uuid() as uuid13, e13.fullUrl = append('https://example/Observation/', uuid13), request.url = 'Observation', dReport.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs13.id) then {
section -> obs13.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
section -> obs13.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
section -> obs13.status = 'preliminary' "obsst";
section.code -> obs13.code "obscde";
section -> obs13.status = 'final' "statusS";
text -> obs13.note as note then {
text as t -> note.text = create('string') as textNote then EDstring(t, textNote) "note";
} "narrative";
} "txtsec";
} "NonConclusion";
section where (code.code = '55110-1') then {
section.text as t -> dReport.conclusion = create('string') as textConclusion then EDstring(t, textConclusion) "conc";
} "conclusion";
} "whereCond";
}
group Observation(source cda : observation, target patient : Patient, target encounter : Encounter, target ob : Observation, target bundle : Bundle) {
cda -> ob.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
cda -> ob.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
cda.code -> ob.code;
cda -> ob.status = 'final' "Stats";
// value datatype
cda.value : ST as st -> ob.value = create('string'), ob.value = (st.dataString);
cda.value : BL as boolean -> ob.value = (boolean.value) "boolean";
cda.value : INT as int -> ob.value = (int.value);
cda.value : CE as val then {
val -> ob.value = create('CodeableConcept') as ce then {
val.originalText as originalText then {
originalText.reference as reference -> ce.text = (reference.value);
};
val -> ce.coding as coding then {
val.code as code -> coding.code = cast(code, 'string');
val.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
val.displayName as display -> coding.display = cast(display, 'string');
} "code";
val.translation as translation -> ce.coding as coding then {
translation.code as code -> coding.code = cast(code, 'string');
translation.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
translation.displayName as display -> coding.display = cast(display, 'string');
translation.qualifier as qualifier then {
qualifier.value as value -> ce.coding as coding then {
value.code as code -> coding.code = cast(code, 'string');
value.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
value.displayName as display -> coding.display = cast(display, 'string');
};
};
};
} "coding";
} "val";
cda.value : CD as val then {
val -> ob.value = create('CodeableConcept') as ce then {
val.originalText as originalText then {
originalText.reference as reference -> ce.text = (reference.value);
};
val -> ce.coding as coding then {
val.code as code -> coding.code = cast(code, 'string');
val.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
val.displayName as display -> coding.display = cast(display, 'string');
} "code";
val.translation as translation -> ce.coding as coding then {
translation.code as code -> coding.code = cast(code, 'string');
translation.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
translation.displayName as display -> coding.display = cast(display, 'string');
translation.qualifier as qualifier then {
qualifier.value as value -> ce.coding as coding then {
value.code as code -> coding.code = cast(code, 'string');
value.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
value.displayName as display -> coding.display = cast(display, 'string');
};
};
};
} "coding";
} "val";
cda.value : PQ as val then {
val -> ob.value = create('Quantity') as quantity then {
val.value as value -> quantity.value = value;
val.unit as unit -> quantity.unit = unit;
} "quantity";
} "valueQuantity";
cda.effectiveTime as effectiveTime -> ob.effective = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
cda.effectiveTime as effectiveTime where effectiveTime.low.exists() or effectiveTime.high.exists() then {
cda.effectiveTime as eff -> ob.effective = create('Period') as period then IVLTSPeriod(effectiveTime, period) "value3";
} "where";
cda.text as text -> ob.note as note then {
text.reference as reference -> note.text = (reference.value) "text";
} "note";
cda.statusCode as s then {
s.code as cos -> ob.status = translate(cos, '#OBSstatus', 'code') "codeS";
} "status";
}
group ImagingStudy(source src : act, source section : section, target tgt : ImagingStudy, target patient : Patient, target encounter : Encounter) {
src.id -> tgt.identifier;
src -> tgt.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
src -> tgt.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
src -> tgt.status = 'available' "status";
src.entryRelationship as entryRelationship then {
entryRelationship.act as act -> tgt.series as series then {
act.id as id -> series.uid = (id.root);
section.code as code -> series.modality = create('Coding') as coding then {
code.code as code1 -> coding.code = cast(code1, 'string');
code.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
code.displayName as display -> coding.display = cast(display, 'string');
} "modality";
act.entryRelationship as entryRelationship2 then {
entryRelationship2.observation as obs -> series.instance as instance then {
obs.id as id -> instance.uid = (id.root) "root";
obs.code as code1 -> instance.sopClass = create('Coding') as coding then {
code1.code as code -> coding.code = cast(code, 'string');
code1.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
code1.displayName as display -> coding.display = cast(display, 'string');
} "sopClass";
} "idRoot";
} "instance";
} "series";
};
}
group ConditionFunction(source src : cdaElement, target tgt : Condition, target patient : Patient, target encounter : Encounter, target bundle : Bundle) {
src.code -> tgt.category;
src -> tgt.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
src -> tgt.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
src.statusCode as stscode -> tgt.verificationStatus as verifstatus then {
stscode as codeS -> verifstatus.coding = create('Coding') as coding then {
codeS.code -> coding.code = 'confirmed';
codeS -> coding.system = 'http://terminology.hl7.org/CodeSystem/condition-ver-status' "system";
codeS -> coding.display = cast('Confirmed', 'string') "display";
} "coding";
} "verifstatus";
src where effectiveTime.low.exists() or effectiveTime.high.exists() then {
src.effectiveTime as effectiveTime -> tgt.onset = create('Period') as period then IVLTSPeriod(effectiveTime, period) "valuePeriod";
} "where";
src.effectiveTime as effectiveTime -> tgt.onset = create('dateTime') as dateTime then TSDateTime(effectiveTime, dateTime) "value2";
src.value -> tgt.code;
src.entryRelationship as entryRelationship then {
entryRelationship.observation as obsentry then {
obsentry.code where code = '89261-2' then {
obsentry -> tgt.evidence as evidence, bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('Observation') as obsy, obsy.id = uuid() as uuid1, e1.fullUrl = append('https://example/Observation/', uuid1), request.url = 'Observation', evidence.detail = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obsy.id) then Observation(obsentry, patient, encounter, obsy, bundle) "observation";
} "observation";
obsentry.code where code = '33999-4' then {
obsentry.value as value -> tgt.clinicalStatus as clinicalstatus then {
value as val -> clinicalstatus.coding = create('Coding') as coding then {
val where (code = 'LA9041-0') -> coding.code = 'resolved' "code";
val where (code = 'LA18632-2') -> coding.code = 'inactive' "code";
val where (code = 'LA16666-2') -> coding.code = 'active' "code";
val -> coding.system = 'http://terminology.hl7.org/CodeSystem/condition-clinical' "system";
val.displayName as display -> coding.display = cast(display, 'string') "display";
} "coding";
obsentry.text as text then {
text.reference as reference -> clinicalstatus.text = (reference.value) "text";
};
} "clinicalstatus";
} "clinicalStatus2";
} "EntryRelObsevation";
} "entryR";
}
group allergyFunction(source src : cdaElement, target tgt : AllergyIntolerance, target patient : Patient, target encounter : Encounter) {
src -> tgt.patient = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
src -> tgt.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
src.entryRelationship as entryRelationship1 then {
entryRelationship1.observation as observation1 then {
observation1 where effectiveTime.low.exists() or effectiveTime.high.exists() then {
observation1.effectiveTime as effectiveTime -> tgt.onset = create('Period') as period then IVLTSPeriod(effectiveTime, period) "valuePeriod";
} "where";
observation1.effectiveTime as effectiveTime -> tgt.onset = create('dateTime') as dateTime then TSDateTime(effectiveTime, dateTime) "value2";
observation1.value as code then {
code.code as code1 -> tgt.type = translate(code1, '#AllergyTypeMap', 'code') "type";
code.code as code1 -> tgt.category = translate(code1, '#AllergyCategoryMap', 'code') "category";
} "code";
observation1.participant as participant -> tgt.reaction as reaction then {
observation1.entryRelationship as entryRelationship2 where (typeCode = 'MFST') then {
entryRelationship2.observation as observation2 then {
observation2.value -> reaction.manifestation "manifestation";
observation2.effectiveTime as effectiveTime then {
effectiveTime.low as low -> reaction.onset = create('dateTime') as value then TSDateTime(low, value) "valuePeriodLow";
} "low";
} "observ2";
} "entryR2";
participant.participantRole as participantRole then {
participantRole.playingEntity as playingEntity then {
playingEntity.code -> reaction.substance "reaction";
};
};
};
observation1.entryRelationship as entryRelationship2 where (typeCode = 'MFST') then {
entryRelationship2.observation as observation2 where observation1.participant.exists().not() -> tgt.reaction as reaction then {
observation2.value -> reaction.manifestation "manifestation";
observation2.effectiveTime as effectiveTime then {
effectiveTime.low as low -> reaction.onset = create('dateTime') as value then TSDateTime(low, value) "valuePeriodLow";
} "low";
} "observ2";
} "entryR2";
observation1.entryRelationship as entryRelationship3 where (typeCode = 'SUBJ') then {
entryRelationship3.observation as observation3 then {
// criticality
observation3.value as value then {
value.code as c -> tgt.criticality = translate(c, '#CricalityMap', 'code') "value";
} "criticality";
} "observ3";
entryRelationship3.act as act -> tgt.note as note then {
act.text as text then {
text.reference as reference -> note.text = (reference.value);
} "note";
};
} "entryR3";
observation1.entryRelationship as entryRelationship4 where (typeCode = 'REFR') then {
entryRelationship4.observation as observation4 then {
// observation4.value -> tgt.clinicalStatus;
observation4.value as value -> tgt.clinicalStatus as clinicalStatus then {
value as valu -> clinicalStatus.coding = create('Coding') as coding then {
valu where (code = 'LA9041-0') -> coding.code = 'resolved' "code";
valu where (code = 'LA18632-2') -> coding.code = 'inactive' "code";
valu where (code = 'LA16666-2') -> coding.code = 'active' "code";
valu -> coding.system = 'http://terminology.hl7.org/CodeSystem/allergyintolerance-clinical' "system";
valu.displayName as display -> coding.display = cast(display, 'string') "display";
} "coding";
} "clinicalStatus";
} "observ4";
} "entryR4";
};
} "entryrelationship";
}
group FamilyMemberFunction(source src : organizer, target tgt : FamilyMemberHistory, target patient : Patient) {
src -> tgt.patient = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "patReference";
src.statusCode -> tgt.status;
src.effectiveTime as effectiveTime -> tgt.date = create('dateTime') as value then TSDateTime(effectiveTime, value) "date";
src.subject as subject then {
subject.relatedSubject as relatedSubject then {
relatedSubject.code -> tgt.relationship "relationshipCode";
relatedSubject.subject as subject -> tgt.sex as sex then {
subject.administrativeGenderCode as administrativeGenderCode -> sex.coding as coding then {
administrativeGenderCode.code as sexCode -> coding.code = translate(sexCode, '#cm-v3-administrative-gender', 'code') "gender";
administrativeGenderCode.system -> coding.system = 'http://hl7.org/fhir/administrative-gender';
} "coding";
};
} "relatedSub";
} "relationship";
src.component as component -> tgt.condition as condition then {
component.observation as observation then {
observation.code -> condition.code;
observation.text as text -> tgt.note as note then {
text.reference as reference -> note.text = (reference.value) "value";
} "reference";
observation.statusCode -> tgt.status;
observation where observation.effectiveTime.exists() then {
observation.effectiveTime as effectiveTime -> tgt.condition = create('BackboneElement') as condition then {
observation.code -> condition.code;
observation.value -> condition.outcome "codeable";
effectiveTime -> condition.onset = create('Period') as period then {
effectiveTime -> period.start = create('dateTime') as start then TSDateTime(effectiveTime, start) "val";
} "efft";
} "effttemp";
} "cont";
observation.value -> condition.outcome "codeable";
observation.entryRelationship as entryR then {
entryR.observation as obs then {
obs where (code.code = '35267-4') then {
obs.value as value -> condition.onset = create('Age') as Age then {
value.value as valueAge -> Age.value = valueAge "age";
value.unit as unit -> Age.code = unit;
value.unit as unit -> Age.unit = unit;
value -> Age.system = 'http://unitsofmeasure.org' "system";
};
} "insorgenza";
obs where (code.code = '39016-1') then {
obs.value as value -> tgt.deceased = create('Age') as Age then {
value.value as valueAge -> Age.value = valueAge "age";
value.unit as unit -> Age.code = unit;
value.unit as unit -> Age.unit = unit;
value -> Age.system = 'http://unitsofmeasure.org' "system";
};
} "death";
} "obser";
} "EntryRel";
};
};
}