CDA to FHIR Maps
0.1.0 - ci-build
CDA to FHIR Maps
0.1.0 - ci-build
CDA to FHIR Maps, published by HL7 Italy. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-it/cda2fhir/ and changes regularly. See the Directory of published versions
| Official URL: http://hl7.it/fhir/cda2fhir/StructureMap/cda2fhirPs | Version: 0.1.0 | |||
| Draft as of 2024-04-11 | Computable Name: cda2fhirPs | |||
map "http://hl7.it/fhir/cda2fhir/StructureMap/cda2fhirPs" = "cda2fhirPs"
uses "http://hl7.org/fhir/cda/StructureDefinition/ClinicalDocument" alias ClinicalDocument as source
uses "http://hl7.org/fhir/cda/StructureDefinition/AssignedAuthor" alias AssignedAuthor as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/AssignedEntity" alias AssignedEntity as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/AssociatedEntity" alias AssociatedEntity as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/CustodianOrganization" alias CustodianOrganization as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/OrganizationPartOf" alias OrganizationPartOf as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/Organization" alias rapresentedOrganization as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/Section" alias Section as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/PatientRole" alias PatientRole as queried
uses "http://hl7.org/fhir/cda/StructureDefinition/AD" alias AD as source
uses "http://hl7.org/fhir/StructureDefinition/Bundle" alias Bundle as target
uses "http://hl7.org/fhir/StructureDefinition/Composition" alias Composition as produced
uses "http://hl7.org/fhir/StructureDefinition/Patient" alias Patient as produced
uses "http://hl7.org/fhir/StructureDefinition/Encounter" alias Encounter as produced
uses "http://hl7.org/fhir/StructureDefinition/Person" alias Patient as produced
uses "http://hl7.org/fhir/StructureDefinition/List" alias List as produced
uses "http://hl7.org/fhir/StructureDefinition/Practitioner" alias Practitioner as produced
uses "http://hl7.org/fhir/StructureDefinition/Organization" alias Organization as produced
uses "http://hl7.org/fhir/cda/StructureDefinition/Act" alias Act as produced
uses "http://hl7.org/fhir/cda/StructureDefinition/IVL-PQ" alias IVL_PQ as source
uses "http://hl7.org/fhir/cda/StructureDefinition/PQ" alias PQ as source
uses "http://hl7.org/fhir/StructureDefinition/SimpleQuantity" alias SimpleQuantity as target
imports "http://hl7.it/fhir/cda2fhir/StructureMap/cda2fhirDataTypes"
imports "http://hl7.it/fhir/cda2fhir/StructureMap/cda2fhirHeader"
group CdaToBundle(source cda : ClinicalDocument, target bundle : Bundle) {
cda -> bundle.entry as e, e.request = create('BackboneElement') as request, request.method = 'POST', e.resource = create('Composition') as composition, composition.id = uuid() as uuid1, e.fullUrl = append('https://example/Composition/', uuid1), request.url = 'Composition', bundle.entry as e2, e2.request = create('BackboneElement') as requestPAT, requestPAT.method = 'PUT', e2.resource = create('Patient') as patient, patient.id = uuid() as uuid2, e2.fullUrl = append('https://example/Patient/', uuid2), bundle.entry as e3, e3.request = create('BackboneElement') as request, request.method = 'POST', e3.resource = create('Encounter') as encounter, encounter.id = uuid() as uuid3, e3.fullUrl = append('https://example/Encounter/', uuid3), request.url = 'Encounter', bundle.entry as e4, e4.request = create('BackboneElement') as request, request.method = 'POST', e4.resource = create('DocumentReference') as DocumentReference, DocumentReference.id = uuid() as uuid4, e4.fullUrl = append('https://example/DocumentReference/', uuid4), request.url = 'DocumentReference' then {
cda then ClinicalDocumentToBundle(cda, patient, composition, encounter, bundle, DocumentReference) "cdatobundle";
cda.recordTarget as recordTarget then {
recordTarget.patientRole as patient then {
patient.id as id -> patient.identifier as identifier then {
id.root as r -> identifier.system = translate(r, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri') "root1";
id.extension as ext1 -> identifier.value = ext1 "value";
id.assigningAuthorityName as s -> identifier.assigner as a, a.display = s;
} "idfr";
patient.id as id where (root = '2.16.840.1.113883.2.9.4.3.2') or (root = '2.16.840.1.113883.2.9.4.3.7') or (root = '2.16.840.1.113883.2.9.4.3.3') or (root = '2.16.840.1.113883.2.9.4.3.17') or (root = '2.16.840.1.113883.2.9.4.3.18') or (root = '2.16.840.1.113883.2.9.2.10.4.1.1') or (root = '2.16.840.1.113883.2.9.2.20.4.1.1') or (root = '2.16.840.1.113883.2.9.2.30.4.1.1') or (root = '2.16.840.1.113883.2.9.2.41.4.1.1') or (root = '2.16.840.1.113883.2.9.2.42.4.1.1') or (root = '2.16.840.1.113883.2.9.2.50.4.1.1') or (root = '2.16.840.1.113883.2.9.2.60.4.1.1') or (root = '2.16.840.1.113883.2.9.2.70.4.1.1') or (root = '2.16.840.1.113883.2.9.2.80.4.1.1') or (root = '2.16.840.1.113883.2.9.2.90.4.1.1') or (root = '2.16.840.1.113883.2.9.2.100.4.1.1') or (root = '2.16.840.1.113883.2.9.2.110.4.1.1') or (root = '2.16.840.1.113883.2.9.2.120.4.1.1') or (root = '2.16.840.1.113883.2.9.2.130.4.1.1') or (root = '2.16.840.1.113883.2.9.2.140.4.1.1') or (root = '2.16.840.1.113883.2.9.2.150.4.1.1') or (root = '2.16.840.1.113883.2.9.2.160.4.1.1') or (root = '2.16.840.1.113883.2.9.2.170.4.1.1') or (root = '2.16.840.1.113883.2.9.2.180.4.1.1') or (root = '2.16.840.1.113883.2.9.2.190.4.1.1') or (root = '2.16.840.1.113883.2.9.2.200.4.1.1') or (root = '2.16.840.1.113883.2.9.2.10.4.1') or (root = '2.16.840.1.113883.2.9.2.20.4.1') or (root = '2.16.840.1.113883.2.9.2.30.4.1') or (root = '2.16.840.1.113883.2.9.2.41.4.1') or (root = '2.16.840.1.113883.2.9.2.42.4.1') or (root = '2.16.840.1.113883.2.9.2.50.4.1') or (root = '2.16.840.1.113883.2.9.2.60.4.1') or (root = '2.16.840.1.113883.2.9.2.70.4.1') or (root = '2.16.840.1.113883.2.9.2.80.4.1') or (root = '2.16.840.1.113883.2.9.2.90.4.1') or (root = '2.16.840.1.113883.2.9.2.100.4.1') or (root = '2.16.840.1.113883.2.9.2.110.4.1') or (root = '2.16.840.1.113883.2.9.2.120.4.1') or (root = '2.16.840.1.113883.2.9.2.130.4.1') or (root = '2.16.840.1.113883.2.9.2.140.4.1') or (root = '2.16.840.1.113883.2.9.2.150.4.1') or (root = '2.16.840.1.113883.2.9.2.160.4.1') or (root = '2.16.840.1.113883.2.9.2.170.4.1') or (root = '2.16.840.1.113883.2.9.2.180.4.1') or (root = '2.16.840.1.113883.2.9.2.190.4.1') or (root = '2.16.840.1.113883.2.9.2.200.4.1') or (root = '2.16.840.1.113883.2.9.4.3.15') then {
id.extension as ext -> requestPAT.url = append('Patient?identifier=', ext) "UUID";
} "ext";
} "recPat";
} "patient";
} "ClinicalDocumentToBody";
}
group ClinicalDocumentToBundle(source cda : ClinicalDocument, target patient : Patient, target composition : Composition, target encounter : Encounter, target bundle : Bundle, target DocumentReference : DocumentReference) {
cda -> encounter.status = 'finished' "finished";
cda -> encounter.class = create('Coding') as coding then {
cda -> coding.code = 'summary' "code";
} "coding";
cda -> bundle.id = uuid() "id";
cda.id -> bundle.identifier "identifier";
cda -> bundle.type = 'transaction' "type";
// cda.effectiveTime -> bundle.timestamp;
cda -> bundle.timestamp = (timestamp.now()) "date";
cda then ClinicalDocumentComposition(cda, composition, patient, encounter, bundle, DocumentReference) "composition";
cda.component as component then {
component.structuredBody as body then {
body.component as component then {
component.section as srcSection then {
srcSection.code -> composition.section as tgtSection then ClinicalDocumentSection(cda, srcSection, patient, tgtSection, bundle, encounter, composition);
};
};
} "body";
} "diagnostic";
}
group ClinicalDocumentSection(source cda : ClinicalDocument, source src : Section, target patient : Patient, target tgt, target bundle : Bundle, target enc : Encounter, target composition : Composition) {
src.title as t -> tgt.title = (t.dataString);
src.code -> tgt.code;
src.entry as entry then {
src.text as cdaText -> tgt.text as fhirText then {
cdaText -> fhirText.status = 'generated' "narrativeStatus";
cdaText as t -> fhirText.div = t "narrativeText";
} "cdaText";
// sezioni che sono strutturate
src.code where (code = '30954-2') then {
entry.organizer as organizer -> bundle.entry as e0, e0.request = create('BackboneElement') as request, request.method = 'POST', e0.resource = create('DiagnosticReport') as dia, dia.id = uuid() as uuid0, e0.fullUrl = append('https://example/DiagnosticReport/', uuid0), request.url = 'DiagnosticReport', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/DiagnosticReport/' + %dia.id) then DiagnosticReportFunction(organizer, patient, enc, dia, bundle) "diagnostic";
} "entryObs";
src.code where (code = '29762-2') or (code = '10162-6') then {
entry.observation as observation -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('Observation') as obs1, obs1.id = uuid() as uuid1, e1.fullUrl = append('https://example/Observation/', uuid1), request.url = 'Observation', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs1.id) then Observation(observation, patient, enc, obs1, bundle) "obs1";
} "entryObs";
src.code where (code = '8716-3') or (code = '47420-5') then {
entry.organizer as organizer -> bundle.entry as e2, e2.request = create('BackboneElement') as request, request.method = 'POST', e2.resource = create('Observation') as obs2, obs2.id = uuid() as uuid2, e2.fullUrl = append('https://example/Observation/', uuid2), request.url = 'Observation', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs2.id) then ObservationOrganizer(src, organizer, patient, enc, obs2, bundle) "obs2";
entry.observation as organizer -> bundle.entry as e2, e2.request = create('BackboneElement') as request, request.method = 'POST', e2.resource = create('Observation') as obs2, obs2.id = uuid() as uuid2, e2.fullUrl = append('https://example/Observation/', uuid2), request.url = 'Observation', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs2.id) then ObservationOrganizer(src, organizer, patient, enc, obs2, bundle) "obs2";
} "organizer";
src.code where code = '11450-4' then {
entry.act as act -> bundle.entry as e3, e3.request = create('BackboneElement') as request, request.method = 'POST', e3.resource = create('Condition') as condition, condition.id = uuid() as uuid3, e3.fullUrl = append('https://example/Condition/', uuid3), request.url = 'Condition', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Condition/' + %condition.id) then ConditionFunction(act, condition, patient, enc, bundle) "condition";
} "listaDeiProblemi";
src.code where (code = '48765-2') then {
entry.act as act -> bundle.entry as e5, e5.request = create('BackboneElement') as request, request.method = 'POST', e5.resource = create('AllergyIntolerance') as allergy, allergy.id = uuid() as uuid5, e5.fullUrl = append('https://example/AllergyIntolerance/', uuid5), request.url = 'AllergyIntolerance', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/AllergyIntolerance/' + %allergy.id) then allergyFunction(act, allergy, patient, enc) "allergy";
} "entryAct";
src.code where code = '10160-0' then {
entry.substanceAdministration as subAdmin -> bundle.entry as e6, e6.request = create('BackboneElement') as request, request.method = 'POST', e6.resource = create('MedicationStatement') as medicationstatement, medicationstatement.id = uuid() as uuid6, e6.fullUrl = append('https://example/MedicationStatement/', uuid6), request.url = 'MedicationStatement', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/MedicationStatement/' + %medicationstatement.id) then MedicationStatement(subAdmin, medicationstatement, patient, enc, bundle) "TerapiaFarmacologica";
} "terapia";
src.code where code = '11369-6' then {
entry.substanceAdministration as subVACC -> bundle.entry as e7, e7.request = create('BackboneElement') as request, request.method = 'POST', e7.resource = create('Immunization') as immunization, immunization.id = uuid() as uuid7, e7.fullUrl = append('https://example/Immunization/', uuid7), request.url = 'Immunization', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Immunization/' + %immunization.id) then Immunization(subVACC, patient, enc, immunization, bundle) "immunization";
} "vacc";
src.code where code = '10157-6' then {
entry.organizer as organizer -> bundle.entry as e12, e12.request = create('BackboneElement') as request, request.method = 'POST', e12.resource = create('FamilyMemberHistory') as familyMember, familyMember.id = uuid() as uuid12, e12.fullUrl = append('https://example/FamilyMemberHistory/', uuid12), request.url = 'FamilyMemberHistory', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/FamilyMemberHistory/' + %familyMember.id) then FamilyMemberFunction(organizer, familyMember, patient) "family";
} "family";
src.code where code = '46264-8' then {
entry.supply as supply -> bundle.entry as e8, e8.request = create('BackboneElement') as request, request.method = 'POST', e8.resource = create('Procedure') as procedure, procedure.id = uuid() as uuid8, e8.fullUrl = append('https://example/Procedure/', uuid8), request.url = 'Procedure', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Procedure/' + %procedure.id) then Procedure(supply, patient, enc, procedure, bundle) "protesi";
} "impianti";
src.code where code = '47519-4' then {
entry.procedure as procedure -> bundle.entry as e9, e9.request = create('BackboneElement') as request, request.method = 'POST', e9.resource = create('Procedure') as procedure2, procedure2.id = uuid() as uuid9, e9.fullUrl = append('https://example/Procedure/', uuid9), request.url = 'Procedure', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Procedure/' + %procedure2.id) then Procedure(procedure, patient, enc, procedure2, bundle) "tratt";
} "trattamentiProcedure";
src.code where code = '46240-8' then {
// entry.encounter as encounter -> enc then{
entry.encounter as encounter -> bundle.entry as e9, e9.request = create('BackboneElement') as request, request.method = 'POST', e9.resource = create('Encounter') as encounterF, encounterF.id = uuid() as uuid9, e9.fullUrl = append('https://example/Encounter/', uuid9), request.url = 'Encounter', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounterF.id) then EncounterFunction(encounter, patient, enc, encounterF, bundle);
} "visiteRicoveri";
src.code where code = '57827-8' then {
entry.act as act -> bundle.entry as e13, e13.request = create('BackboneElement') as request, request.method = 'POST', e13.resource = create('Coverage') as coverage, coverage.id = uuid() as uuid13, e13.fullUrl = append('https://example/Coverage/', uuid13), request.url = 'Coverage', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Coverage/' + %coverage.id) then Coverage(act, patient, enc, coverage, bundle) "esen";
} "esenzioni";
src.code where code = 'PSSIT99' then {
entry.act as act -> bundle.entry as e14, e14.request = create('BackboneElement') as request, request.method = 'POST', e14.resource = create('OrganizationAffiliation') as affiliation, affiliation.id = uuid() as uuid14, e14.fullUrl = append('https://example/OrganizationAffiliation/', uuid14), request.url = 'OrganizationAffiliation', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/OrganizationAffiliation/' + %affiliation.id) then OrganizationAffiliation(act, patient, enc, affiliation, bundle) "OrgAffiliation";
} "retiPatologia";
};
src where src.entry.exists() then {
src.code where code = '18776-5' then {
src -> bundle.entry as e11, e11.request = create('BackboneElement') as request, request.method = 'POST', e11.resource = create('CarePlan') as careplan, careplan.id = uuid() as uuid11, e11.fullUrl = append('https://example/CarePlan/', uuid11), request.url = 'CarePlan', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/CarePlan/' + %careplan.id) then {
src.entry as entry then CarePlanFunction(entry, careplan, patient, enc, bundle) "prestazioni";
} "pianiCura";
} "raccoglitore";
} "esiste";
src where src.entry.exists().not() then {
// Anmanesi Familiare narrativa
src.code where code = '10157-6' then {
src.text as text -> bundle.entry as e12, e12.request = create('BackboneElement') as request, request.method = 'POST', e12.resource = create('FamilyMemberHistory') as familyMember, familyMember.id = uuid() as uuid12, e12.fullUrl = append('https://example/FamilyMemberHistory/', uuid12), request.url = 'FamilyMemberHistory', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/FamilyMemberHistory/' + %familyMember.id) then {
src -> familyMember.patient = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
src -> familyMember.status = 'health-unknown' "statusS";
text -> familyMember.note as note then {
text as t -> note.text = t "reference";
} "reference";
text -> familyMember.relationship = create('CodeableConcept') as relation then {
text as txt -> relation.text = txt "text";
} "medication";
} "family";
} "familyraccoglitore";
// Piano di cura narrativa
src.code where code = '18776-5' then {
src.text as text -> bundle.entry as e11, e11.request = create('BackboneElement') as request, request.method = 'POST', e11.resource = create('CarePlan') as careplan, careplan.id = uuid() as uuid11, e11.fullUrl = append('https://example/CarePlan/', uuid11), request.url = 'CarePlan', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/CarePlan/' + %careplan.id) then {
src -> careplan.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// src-> careplan.encounter=create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %enc.id) "reference";
src -> careplan.status = 'active' "status";
src -> careplan.intent = 'order' "intent";
text -> careplan.note as note then {
text as t -> note.text = t "reference";
} "reference";
} "pianiCura";
} "raccoglitore";
// sezioni che sono narrative
src.code where (code = '30954-2') or (code = '29762-2') or (code = '8716-3') or (code = '47420-5') or (code = '42348-3') then {
src.text as text -> bundle.entry as e13, e13.request = create('BackboneElement') as request, request.method = 'POST', e13.resource = create('Observation') as obs1, obs1.id = uuid() as uuid13, e13.fullUrl = append('https://example/Observation/', uuid13), request.url = 'Observation', tgt.entry = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs1.id) then {
src -> obs1.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// src -> obs1.encounter=create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %enc.id) "reference";
src -> obs1.status = 'preliminary' "obsst";
src.code -> obs1.code "obscde";
src -> obs1.status = 'final' "statusS";
text -> obs1.note as note then {
text as t -> note.text = create('string') as textNote then EDstring(t, textNote) "note";
} "narrative";
} "txtsec";
} "narrative";
} "code";
src.component as component then {
component.section as sec -> tgt.section as tgtSection then ClinicalDocumentSection(cda, sec, patient, tgtSection, bundle, enc, dReport);
};
}
group Procedure(source src : cdaElement, target patient : Patient, target encounter : Encounter, target tgt : Procedure, target bundle : Bundle) {
// toASK
src.text as tx -> tgt.note as note then {
tx.reference as reff -> note.text = (reff.value) "r";
} "tx";
src.templateId where root = '2.16.840.1.113883.2.9.10.1.4.3.10.3' then {
src.effectiveTime as effectiveTime -> tgt.performed = (effectiveTime.value);
src.code -> tgt.code;
} "ref";
src -> tgt.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// src -> tgt.encounter=create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
src.statusCode as s then {
s.code as cos -> tgt.status = translate(cos, '#EventStatus', 'code') "codeS";
} "status";
src where statusCode.exists().not() -> tgt.status = 'unknown' "status2";
src.templateId where root = '2.16.840.1.113883.2.9.10.1.4.3.9.1' then {
src -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('Device') as deviceRes, deviceRes.id = uuid() as uuid1, e1.fullUrl = append('https://example/Device/', uuid1), request.url = 'Device', tgt.usedReference = create('Reference') as reference, reference.reference = ('https://example/Device/' + %deviceRes.id) then {
src -> deviceRes.patient = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
src.code -> deviceRes.type;
} "device";
src.effectiveTime as effectiveTime where (value.exists()) -> tgt.performed = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
src.effectiveTime as effectiveTime where (low.exists()) -> tgt.performed = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
} "presenzaProtesiImpianto";
src.templateId where root = '2.16.840.1.113883.2.9.10.1.4.3.9.2' then {
src.code as code -> tgt.note as note then {
code.displayName as displayName -> note.text = (displayName) "text";
} "note";
} "assenza";
src.templateId where root = '2.16.840.1.113883.2.9.10.1.4.3.11.1' then {
src.id -> tgt.identifier;
src.code -> tgt.code;
src.effectiveTime as effectiveTime where (value.exists()) -> tgt.performed = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
src.effectiveTime as effectiveTime where (low.exists()) -> tgt.performed = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
src.entryRelationship as entryR then {
entryR.observation as observation -> bundle.entry as e3, e3.request = create('BackboneElement') as request, request.method = 'POST', e3.resource = create('Observation') as obs1, obs1.id = uuid() as uuid3, e3.fullUrl = append('https://example/Observation/', uuid3), request.url = 'Observation', tgt.reasonReference = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs1.id) then Observation(observation, patient, encounter, obs1, bundle);
} "entryRelProcedure";
} "procedureTrattamenti";
}
group Observation(source cda, target patient : Patient, target encounter : Encounter, target ob : Observation, target bundle : Bundle) {
cda -> ob.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// cda-> ob.encounter=create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
cda.id -> ob.identifier;
cda.code -> ob.code;
cda -> ob.status = 'final' "Stats";
// value datatype
cda.value : ST as st -> ob.value = create('string'), ob.value = (st.dataString);
cda.value : BL as boolean -> ob.value = (boolean.value) "boolean";
cda.value : INT as int -> ob.value = (int.value) "intval";
cda.value : CE as val then {
val -> ob.value = create('CodeableConcept') as ce then {
val.originalText as originalText then {
originalText.reference as reference -> ce.text = (reference.value);
};
val -> ce.coding as coding then {
val.code as code -> coding.code = cast(code, 'string');
val.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
val.displayName as display -> coding.display = cast(display, 'string');
} "code";
val.translation as translation -> ce.coding as coding then {
translation.code as code -> coding.code = cast(code, 'string');
translation.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
translation.displayName as display -> coding.display = cast(display, 'string');
translation.qualifier as qualifier then {
qualifier.value as value -> ce.coding as coding then {
value.code as code -> coding.code = cast(code, 'string');
value.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
value.displayName as display -> coding.display = cast(display, 'string');
};
};
};
} "coding";
} "val";
cda.value : CD as val then {
val -> ob.value = create('CodeableConcept') as ce then {
val.originalText as originalText then {
originalText.reference as reference -> ce.text = (reference.value);
};
val -> ce.coding as coding then {
val.code as code -> coding.code = cast(code, 'string');
val.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
val.displayName as display -> coding.display = cast(display, 'string');
} "code";
val.translation as translation -> ce.coding as coding then {
translation.code as code -> coding.code = cast(code, 'string');
translation.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
translation.displayName as display -> coding.display = cast(display, 'string');
translation.qualifier as qualifier then {
qualifier.value as value -> ce.coding as coding then {
value.code as code -> coding.code = cast(code, 'string');
value.codeSystem as system -> coding.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
value.displayName as display -> coding.display = cast(display, 'string');
};
};
};
} "coding";
} "val";
cda.value : PQ as val then {
val -> ob.value = create('Quantity') as quantity then {
val.value as value -> quantity.value = value;
val.unit as unit -> quantity.unit = unit;
} "quantity";
} "valueQuantity";
cda.effectiveTime as effectiveTime where (value.exists()) -> ob.effective = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
cda.effectiveTime as effectiveTime where (low.exists()) -> ob.effective = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
cda.text as text -> ob.note as note then {
text.reference as reference -> note.text = (reference.value) "text";
} "note";
cda.statusCode as s then {
s.code as cos -> ob.status = translate(cos, '#OBSstatus', 'code') "codeS";
} "status";
// toASK è giusto siano invertiti?
cda.methodCode -> ob.method;
cda.interpretationCode -> ob.interpretation;
cda.targetSiteCode -> ob.bodySite;
// added
cda.referenceRange as refrange then {
refrange.observationRange as obsrange then {
obsrange.value as val -> ob.referenceRange = create('BackboneElement') as refrangeFH then {
val -> refrangeFH.low = create('SimpleQuantity') as lowfhir then {
val.low as l -> lowfhir.value = (l.value) "val";
val.low as l -> lowfhir.unit = (l.unit) "val";
} "de";
val -> refrangeFH.high = create('SimpleQuantity') as highfhir then {
val.high as h -> highfhir.value = (h.value) "val";
val.high as h -> highfhir.unit = (h.unit) "val";
} "de";
} "refFhir";
} "obsrange";
} "regrange";
}
group ObservationOrganizer(source section : section, source cda : organizer, target patient : Patient, target encounter : Encounter, target ob : Observation, target bundle : Bundle) {
cda -> ob.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// cda-> ob.encounter=create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
cda.id -> ob.identifier;
section.code -> ob.code;
cda -> ob.status = 'final' "Stats";
cda.effectiveTime as effectiveTime where (value.exists()) -> ob.effective = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
cda.effectiveTime as effectiveTime where (low.exists()) -> ob.effective = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
cda.text as text -> ob.note as note then {
text.reference as reference -> note.text = (reference.value) "text";
} "note";
cda.statusCode as s then {
s.code as cos -> ob.status = translate(cos, '#OBSstatus', 'code') "codeS";
} "status";
cda.component as component then {
component.observation as observation -> bundle.entry as ei, ei.request = create('BackboneElement') as request, request.method = 'POST', ei.resource = create('Observation') as obsi, obsi.id = uuid() as uuidi, ei.fullUrl = append('https://example/Observation/', uuidi), request.url = 'Observation', ob.hasMember = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obsi.id) then Observation(observation, patient, encounter, obsi, bundle) "hasMember";
};
}
group Coverage(source src : act, target patient : Patient, target encounter : Encounter, target tgt : Coverage, target bundle : Bundle) {
src -> tgt.beneficiary = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
src -> tgt.payor = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
src.id as id -> tgt.identifier as idf then {
id -> idf.value = (id.root) "ID";
};
src.code -> tgt.type;
src.statusCode as statusCode then {
statusCode.code as s -> tgt.status = translate(s, '#FinancialStatus', 'code') "status";
} "sc";
src where statusCode.exists().not() -> tgt.status = 'active' "statusAbsent";
// src.effectiveTime as effectiveTime -> tgt.period as period then{
src.effectiveTime as effectiveTime where (value.exists()) -> tgt.period = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
src.effectiveTime as effectiveTime where (low.exists()) -> tgt.period = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
src.entryRelationship as entryRelationship then {
entryRelationship.act as ac -> tgt.class as class then {
ac.text as text -> class.type as type then {
text.reference as reference -> type.text = (reference.value) "value";
} "ref";
ac -> class.value = 'commenti' "note";
} "QUI";
} "entryr";
}
group allergyFunction(source src : cdaElement, target tgt : AllergyIntolerance, target patient : Patient, target encounter : Encounter) {
src -> tgt.patient = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// src -> tgt.encounter=create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
src.effectiveTime as effTime then {
effTime.low as l -> tgt.recordedDate as r then TSDateTime(l, r) "value";
} "efftime";
src.entryRelationship as entryRelationship1 then {
entryRelationship1.observation as observation1 then {
observation1.id -> tgt.identifier;
observation1.templateId where root = '2.16.840.1.113883.2.9.10.1.4.3.1.4' -> tgt.code as code then {
observation1 -> code.coding as coding then {
observation1 -> coding.code = 'No known allergy' "code";
} "code";
src.effectiveTime as effectiveTime where (value.exists()) -> tgt.onset = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
src.effectiveTime as effectiveTime -> tgt.onset = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
} "Noallergy";
observation1.effectiveTime as effectiveTime where (value.exists()) -> tgt.onset = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
observation1.effectiveTime as effectiveTime -> tgt.onset = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
observation1.value as code then {
code.code as code1 -> tgt.type = translate(code1, '#AllergyTypeMap', 'code') "type";
code.code as code1 -> tgt.category = translate(code1, '#AllergyCategoryMap', 'code') "category";
} "code";
// toASK qui dovrei fare un controllo sul code
observation1.value -> tgt.code;
observation1.participant as participant -> tgt.reaction as reaction then {
observation1.entryRelationship as entryRelationship2 where (typeCode = 'MFST') then {
entryRelationship2.observation as observation2 then {
observation2.value -> reaction.manifestation "manifestation";
observation2.code -> reaction.manifestation "manifestation";
observation2.text as tx then {
tx.reference as reff -> reaction.description = (reff.value) "tx";
} "tx";
observation2.effectiveTime as effectiveTime then {
effectiveTime.low as low -> reaction.onset = create('dateTime') as value then TSDateTime(low, value) "valuePeriodLow";
effectiveTime.high as high -> tgt.lastOccurrence = create('dateTime') as value then TSDateTime(high, value) "valuePeriodHigh";
} "low";
} "observ2";
} "entryR2";
participant.participantRole as participantRole then {
participantRole.playingEntity as playingEntity then {
playingEntity.code -> reaction.substance "reaction";
};
};
};
observation1.entryRelationship as entryRelationship2 where (typeCode = 'MFST') then {
entryRelationship2.observation as observation2 where observation1.participant.exists().not() -> tgt.reaction as reaction then {
observation2.value -> reaction.manifestation "manifestation";
observation2.text as tx then {
tx.reference as reff -> reaction.description = (reff.value) "tx";
} "tx";
observation2.effectiveTime as effectiveTime then {
effectiveTime.low as low -> reaction.onset = create('dateTime') as value then TSDateTime(low, value) "valuePeriodLow";
} "low";
} "observ2";
} "entryR2";
observation1.entryRelationship as entryRelationship3 where (typeCode = 'SUBJ') then {
entryRelationship3.observation as observation3 then {
observation3.value as value then {
value.code as c -> tgt.criticality = translate(c, '#CricalityMap', 'code') "value";
} "criticality";
} "observ3";
entryRelationship3.act as act -> tgt.note as note then {
act.text as text then {
text.reference as reference -> note.text = (reference.value);
} "note";
};
} "entryR3";
observation1.entryRelationship as entryRelationship4 where (typeCode = 'REFR') then {
entryRelationship4.observation as observation4 then {
observation4 -> tgt.clinicalStatus as clinicalStatus then {
observation4.value as value then {
value as valu -> clinicalStatus.coding = create('Coding') as coding then {
valu where (code = 'LA9041-0') -> coding.code = 'resolved' "code";
valu where (code = 'LA18632-2') -> coding.code = 'inactive' "code";
valu where (code = 'LA16666-2') -> coding.code = 'active' "code";
valu -> coding.system = 'http://terminology.hl7.org/CodeSystem/allergyintolerance-clinical' "system";
valu.displayName as display -> coding.display = cast(display, 'string') "display";
} "coding";
};
observation4.text as tx then {
tx.reference as ref -> clinicalStatus.text = (ref.value);
} "tx";
} "clinicalStatus";
} "observ4";
} "entryR4";
};
} "entryrelationship";
}
group MedicationStatement(source src : substanceAdministration, target tgt : MedicationStatement, target patient : Patient, target encounter : Encounter, target bundle : Bundle) {
src -> tgt.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// src -> tgt.context = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
src.statusCode -> tgt.status "status";
src.id -> tgt.identifier;
src.text as text -> tgt.note as note then {
text.reference as reference -> note.text = (reference.value) "text";
} "note";
src.effectiveTime as eff where (value.exists()) -> tgt.effective = create('dateTime') as value then TSDateTime(eff, value) "value1";
src.effectiveTime : IVL_TS as eff -> tgt.effective = create('Period') as value then IVLTSPeriod(eff, value) "valuePeriod";
src -> tgt.dosage = create('Dosage') as dosage then {
src.effectiveTime : PIVL_TS as eff then {
eff -> dosage.timing = create('Timing') as timing then periodTiming(eff, timing) "cod";
} "eff";
src where (src.doseQuantity.exists() or src.rateQuantity.exists() or src.routeCode.exists() or src.approachSiteCode.exists()) then {
src.doseQuantity as doseQuant then {
doseQuant.originalText as ot then {
ot.reference -> dosage.text;
} "ot";
doseQuant -> dosage.doseAndRate as dosageRate then {
doseQuant -> dosageRate.dose = create('Range') as d then {
doseQuant -> d.low = create('SimpleQuantity') as l then {
doseQuant.low as lo -> l.value = (lo.value);
doseQuant.low as lo -> l.unit = (lo.unit);
} "low";
doseQuant -> d.high = create('SimpleQuantity') as h then {
doseQuant.high as hi -> h.value = (hi.value);
doseQuant.high as hi -> h.unit = (hi.unit);
} "low";
} "d";
} "dosageRate";
};
src.rateQuantity as rateQuantity then {
rateQuantity.originalText as ot then {
ot.reference -> dosage.text;
} "ot";
rateQuantity -> dosage.doseAndRate as dosageRate then {
rateQuantity -> dosageRate.rate = create('Range') as d then {
rateQuantity -> d.low = create('SimpleQuantity') as l then {
rateQuantity.low as lo -> l.value = (lo.value);
rateQuantity.low as lo -> l.unit = (lo.unit);
} "low";
rateQuantity -> d.high = create('SimpleQuantity') as h then {
rateQuantity.high as hi -> h.value = (hi.value);
rateQuantity.high as hi -> h.unit = (hi.unit);
} "high";
} "r";
} "dosageRate";
} "rate";
src.routeCode -> dosage.route "route";
src.approachSiteCode -> dosage.site "site";
src.targetSiteCode -> dosage.site "site";
} "route";
} "dos";
src.consumable as consumable then {
consumable.manufacturedProduct as manufacturedProduct -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('Medication') as medication, medication.id = uuid() as uuid1, e1.fullUrl = append('https://example/Medication/', uuid1), request.url = 'Medication', tgt.medication = create('Reference') as medref, medref.reference = ('https://example/Medication/' + %medication.id) then Medication(src, medication, patient, bundle) "medication";
};
}
group periodTiming(source effectiveTime : PIVL_TS, target timing : Timing) {
effectiveTime -> timing.repeat as r then {
effectiveTime.period as p -> r.period = (p.value);
effectiveTime.period as p -> r.periodUnit = (p.unit);
} "repeat";
}
group Medication(source src : substanceAdministration, target tgt : Medication, target patient : Patient, target bundle : Bundle) {
src.consumable as consumable then {
consumable.manufacturedProduct as manufacturedProduct then {
manufacturedProduct.manufacturedMaterial as manufacturedMaterial then {
manufacturedMaterial.code -> tgt.code "CE";
src.administrationUnitCode -> tgt.form "form";
} "material";
} "product";
};
src.entryRelationship as entryR then {
entryR.observation as observation then {
observation.code where displayName = 'Grammatura' -> tgt.ingredient as ingredient then {
src.consumable as consumable then {
consumable.manufacturedProduct as manufacturedProduct then {
manufacturedProduct.manufacturedMaterial as manufacturedMaterial then {
manufacturedMaterial.code as code -> ingredient.item = create('CodeableConcept') as value then CECodeableConcept(code, value) "CE";
} "material";
} "product";
};
observation.value as value -> ingredient.strength as strength then {
value -> strength.numerator as numerator then {
value -> numerator.value = (value.value) "valueN";
} "numerator";
value -> strength.denominator as denominator then {
value -> denominator.value = 1 "valueD";
} "denominator";
} "strenght";
} "ingredient";
observation.code where displayName = 'Quantità nella Confezione' then {
observation.value as value -> tgt.amount as amount then {
value -> amount.numerator as numerator then {
value -> numerator.value = (value.value) "valueN";
} "numerator";
value -> amount.denominator as denominator then {
value -> denominator.value = 1 "valueD";
} "denominator";
} "amount";
} "quantita";
} "obs";
} "entryR";
}
group Immunization(source substance : substanceAdministration, target patient : Patient, target encounter : Encounter, target tgt : Immunization, target bundle : Bundle) {
substance -> tgt.patient = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "patientRef";
// substance -> tgt.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "encounterRef";
substance.id as id -> tgt.identifier as idf then {
id.root as r -> idf.system = translate(r, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri') "root1";
};
substance.text as text -> tgt.note as note then {
text.reference as reference -> note.text = (reference.value) "text";
} "note";
substance.statusCode as statusc where (code = 'completed') -> tgt.status = 'completed';
substance.statusCode as statusc where (code = 'aborted') -> tgt.status = 'final';
substance.statusCode as statusc where (code = 'suspended') -> tgt.status = 'enterer-in-error';
substance.statusCode as statusc where (code = 'cancelled') -> tgt.status = 'not-done';
substance.effectiveTime as time -> tgt.occurrence = create('dateTime') as value then TSDateTime(time, value) "efftime";
substance.routeCode -> tgt.route;
substance.approachSiteCode -> tgt.site;
substance -> tgt.doseQuantity = create('SimpleQuantity') as quantity then {
substance.doseQuantity as q then {
q -> quantity.value = (q.value) "val";
q -> quantity.unit = (q.unit) "uni";
} "qua";
} "q";
substance.consumable as cons then {
cons.manufacturedProduct as manufact then {
manufact.manufacturedMaterial as manufactmat then {
manufactmat.code -> tgt.vaccineCode;
manufactmat.lotNumberText as t -> tgt.lotNumber = (t.dataString);
} "manufactmat";
manufact.manufacturerOrganization as manufactOrg -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'PUT', e1.resource = create('Organization') as organization then {
manufactOrg.id as id -> organization.identifier as identifier then {
id.root as r -> identifier.system = translate(r, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri') "root1";
id.extension as ext -> identifier.value = ext then {
manufactOrg -> request.url = append('Organization?identifier=', ext) "UUID";
} "ext";
id.assigningAuthorityName as s -> identifier.assigner as a, a.display = s;
id.root as r then {
id.extension as ext -> organization.id = (r + '-' + ext) as uuid, e1.fullUrl = append('https://example/', uuid), tgt.manufacturer = create('Reference') as reference, reference.reference = ('https://example/' + %organization.id) "idasi";
} "r";
} "identifier";
manufactOrg.name as n -> organization.name = (n.other);
manufactOrg -> organization.meta as meta then {
manufactOrg -> meta.tag = create('Coding') as coding then {
manufactOrg -> coding.system = 'http://algoritmodiscoring' "system";
manufactOrg -> coding.code = 'ClinicalDocument/body/Vaccinazioni/manufacturerOrganization' "code";
} "coding";
} "meta";
} "manufactOrg";
} "manufact";
} "cons";
substance.participant as part -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'PUT', e1.resource = create('Location') as location, location.id = uuid() as uuid1 then {
part -> location.meta as meta then {
part -> meta.tag = create('Coding') as coding then {
part -> coding.system = 'http://algoritmodiscoring' "system";
part -> coding.code = 'ClinicalDocument/body/Vaccinazione/participant' "code";
} "coding";
} "meta";
part.participantRole as partRole then {
partRole.id as id -> location.identifier as identifier then {
id.root as r -> identifier.system = translate(r, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri') "root1";
id.extension as ext -> identifier.value = ext then {
partRole -> request.url = append('Location?identifier=', ext) "UUID";
} "ext";
id.assigningAuthorityName as s -> identifier.assigner as a, a.display = s;
id.root as r then {
id.extension as ext -> location.id = (r + '-' + ext) as uuid, e1.fullUrl = append('https://example/Location', uuid), tgt.location = create('Reference') as reference, reference.reference = ('https://example/' + %location.id) "idasi";
} "r";
} "identifier";
} "role";
} "part";
substance.entryRelationship as entrirel1 then {
entrirel1.observation as obs then {
obs.code where (code = '30973-2') then {
obs -> tgt.protocolApplied = create('BackboneElement') as prot then {
obs.value as v then {
v.value as int -> prot.doseNumber = (int.toString());
};
} "val";
} "codecontrol";
} "obs";
} "entrirel1";
substance.entryRelationship as entrirel2 then {
entrirel2.observation as obs then {
obs.code where (code = '59781-5') then {
obs.value as value then {
value.high as h then {
h.value as value -> tgt.expirationDate = truncate(value, 10);
} "val";
};
} "codecontrol";
} "obs";
} "entrirel2";
substance.entryRelationship as entrirel4 then {
entrirel4.observation as obs then {
obs.code where (code = '59785-6') -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('Observation') as observation, observation.id = uuid() as uuid1, e1.fullUrl = append('https://example/Observation/', uuid1), request.url = 'Observation', tgt.reasonReference = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %observation.id) then {
obs then Observation1(entrirel4, patient, tgt, bundle, enc, observation) "observation";
} "codecontrol";
} "obs";
} "entrirel4";
substance.entryRelationship as entrirel5 then {
entrirel5.observation as obs then {
obs.code where (code = '75321-0') or (code = '5321-0') -> tgt.reaction as reaction then {
obs -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('Observation') as observation, observation.id = uuid() as uuid1, e1.fullUrl = append('https://example/Observation/', uuid1), request.url = 'Observation', reaction.detail = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %observation.id) then Observation(obs, patient, encounter, observation, bundle) "observation";
} "codecontrol";
} "obs";
} "entrirel5";
substance.entryRelationship as entrirel5 then {
entrirel5.act as act then {
act.text as tx -> tgt.note as note then {
tx.reference as reference -> note.text = (reference.value) "text";
} "note";
} "obs";
} "entrirel5";
}
group ConditionFunction(source src : cdaElement, target tgt : Condition, target patient : patient, target encounter : encounter, target bundle : Bundle) {
src.id -> tgt.identifier;
src -> tgt.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// src -> tgt.encounter=create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
src.statusCode as stscode -> tgt.verificationStatus as verifstatus then {
stscode as codeS -> verifstatus.coding = create('Coding') as coding then {
codeS.code -> coding.code = 'confirmed';
codeS -> coding.system = 'http://terminology.hl7.org/CodeSystem/condition-ver-status' "system";
codeS -> coding.display = cast('Confirmed', 'string') "display";
} "coding";
} "verifstatus";
src where entryRelationship.exists().not() then {
src.effectiveTime as effectiveTime where (value.exists()) -> tgt.onset = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
src.effectiveTime as effectiveTime -> tgt.onset = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
} "onset";
src.entryRelationship as entryRelationship then {
entryRelationship.observation as obsentry then {
// toASK
obsentry.value -> tgt.code;
obsentry.code -> tgt.category;
obsentry.effectiveTime as effectiveTime where (value.exists()) -> tgt.onset = create('dateTime') as value then TSDateTime(effectiveTime, value) "value1";
obsentry.effectiveTime as effectiveTime -> tgt.onset = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
obsentry.text as text -> tgt.note as note then {
text.reference as reference -> note.text = (reference.value) "text";
} "note";
obsentry.entryRelationship as entryR2 then {
entryR2.observation as obsentry2 then {
obsentry2.code where code = '89261-2' then {
obsentry2 -> tgt.evidence as evidence, bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('Observation') as obsy, obsy.id = uuid() as uuid1, e1.fullUrl = append('https://example/Observation/', uuid1), request.url = 'Observation', evidence.detail = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obsy.id) then Observation(obsentry2, patient, encounter, obsy, bundle) "observation";
} "observation";
obsentry2.code where code = '33999-4' then {
obsentry2.value as value -> tgt.clinicalStatus as clinicalstatus then {
value as val -> clinicalstatus.coding = create('Coding') as coding then {
val where (code = 'LA9041-0') -> coding.code = 'resolved' "code";
val where (code = 'LA18632-2') -> coding.code = 'inactive' "code";
val where (code = 'LA16666-2') -> coding.code = 'active' "code";
val -> coding.system = 'http://terminology.hl7.org/CodeSystem/condition-clinical' "system";
val.displayName as display -> coding.display = cast(display, 'string') "display";
} "coding";
obsentry2.text as text then {
text.reference as reference -> clinicalstatus.text = (reference.value) "text";
};
} "clinicalstatus";
} "clinicalStatus2";
obsentry2.code where code = 'SEV' then {
obsentry2.value -> tgt.severity;
} "severity";
};
entryR2.act as act then {
act.text as text -> tgt.note as note then {
text.reference as reference -> note.text = (reference.value) "text";
} "note";
};
} "entryR";
} "EntryRelObsevation";
} "entryR";
}
group FamilyMemberFunction(source src : organizer, target tgt : FamilyMemberHistory, target patient : patient) {
src -> tgt.patient = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "patReference";
src.id -> tgt.identifier;
src.statusCode -> tgt.status;
src.effectiveTime as effectiveTime -> tgt.date = create('date') as value then TSDate(effectiveTime, value) "date";
src.subject as subject then {
subject.relatedSubject as relatedSubject then {
relatedSubject.code -> tgt.relationship "relationshipCode";
relatedSubject.subject as subject -> tgt.sex as sex then {
subject.administrativeGenderCode as administrativeGenderCode -> sex.coding as coding then {
administrativeGenderCode.code as sexCode -> coding.code = translate(sexCode, '#cm-v3-administrative-gender', 'code') "gender";
administrativeGenderCode -> coding.system = 'http://hl7.org/fhir/administrative-gender' "system";
administrativeGenderCode.displayName as dn -> coding.display = dn;
} "coding";
};
} "relatedSub";
} "relationship";
src.component as component -> tgt.condition as condition then {
component.observation as observation then {
observation.code -> condition.code;
observation.text as text -> tgt.note as note then {
text.reference as reference -> note.text = (reference.value) "value";
} "reference";
observation.statusCode -> tgt.status;
// observation.effectiveTime as effectiveTime -> condition.onset = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
observation.value -> condition.outcome "codeable";
observation.entryRelationship as entryR then {
entryR.observation as obs then {
obs where (code.code = '35267-4') then {
obs.value as value -> condition.onset = create('Age') as Age then {
value.value as valueAge -> Age.value = valueAge "age";
value.unit as unit -> Age.code = unit;
value.unit as unit -> Age.unit = unit;
value -> Age.system = 'http://unitsofmeasure.org' "system";
};
} "insorgenza";
obs where (code.code = '39016-1') then {
obs.value as value -> tgt.deceased = create('Age') as Age then {
value.value as valueAge -> Age.value = valueAge "age";
value.unit as unit -> Age.code = unit;
value.unit as unit -> Age.unit = unit;
value -> Age.system = 'http://unitsofmeasure.org' "system";
};
} "death";
} "obser";
} "EntryRel";
};
};
}
group Practitioner(source src : performer, target tgt : Encounter, target bundle : Bundle) {
src -> bundle.entry as e22, e22.request = create('BackboneElement') as request, request.method = 'PUT', e22.resource = create('Practitioner') as practitioner1 then {
src.assignedEntity as assignedEntity -> tgt.participant as participant then {
src.time as time where (value.exists()) -> participant.period = create('dateTime') as value then TSDateTime(time, value) "value1";
src.time as time where (low.exists()) -> participant.period = create('Period') as value then IVLTSPeriod(time, value) "valuePeriod";
// src.time as time -> participant.period as period then{
assignedEntity.id as id -> practitioner1.identifier as identifier then {
id.root as r -> identifier.system = translate(r, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri') "root1";
id.extension as ext -> identifier.value = ext "ext";
id.assigningAuthorityName as s -> identifier.assigner as a, a.display = s;
id.root as r then {
id.extension as ext -> practitioner1.id = (r + '-' + ext) as uuid22, e22.fullUrl = append('https://example/Practitioner/', uuid22), participant.individual = create('Reference') as reference, reference.reference = ('https://example/Practitioner/' + %practitioner1.id) "id";
} "r";
} "identifier";
assignedEntity.id as id where (root = '2.16.840.1.113883.2.9.4.3.2') then {
id.extension as ext -> request.url = append('Practitioner?identifier=', ext) "UUID";
} "2";
assignedEntity.id as id where (root != '2.16.840.1.113883.2.9.4.3.2') then {
id.extension as ext -> request.url = append('Practitioner?identifier=', ext) "UUID";
} "diverso";
assignedEntity -> practitioner1.meta as meta then {
src -> meta.tag = create('Coding') as coding then {
src -> coding.system = 'http://algoritmodiscoring' "system";
src -> coding.code = 'ClinicalDocument/body/VisiteRicoveri/performer/' "code";
} "coding";
} "meta";
assignedEntity.addr -> practitioner1.address;
assignedEntity.telecom -> practitioner1.telecom;
assignedEntity.assignedPerson as person then {
person.name -> practitioner1.name;
person.birthTime -> practitioner1.birthDate;
} "partname";
} "participant";
} "resurceCreation";
}
group CarePlanFunction(source src : entry, target tgt : CarePlan, target patient : Patient, target encounter : Encounter, target bundle : Bundle) {
src -> tgt.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
src -> tgt.status = 'unknown' "status";
src -> tgt.intent = 'plan' "intent";
src -> tgt.activity as activity then {
src -> activity.detail as detail then {
src.observation as observation then {
observation then {
observation -> detail.status = 'unknown' "status";
observation -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('Observation') as obs1, obs1.id = uuid() as uuid1, e1.fullUrl = append('https://example/Observation/', uuid1), request.url = 'Observation', detail.reasonReference = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obs1.id) then Observation(observation, patient, encounter, obs1, bundle) "obs1";
} "activity";
} "entryObs";
src.substanceAdministration as substanceAdministration -> tgt.activity as activity then {
substanceAdministration -> bundle.entry as e2, e2.request = create('BackboneElement') as request, request.method = 'POST', e2.resource = create('MedicationRequest') as medre1, medre1.id = uuid() as uuid2, e2.fullUrl = append('https://example/MedicationRequest/', uuid2), request.url = 'MedicationRequest', activity.reference = create('Reference') as reference, reference.reference = ('https://example/MedicationRequest/' + %medre1.id) then MedicationRequest(substanceAdministration, patient, encounter, medre1, bundle) "Terapie";
} "entrySub";
src.procedure as procedureC -> bundle.entry as e8, e8.request = create('BackboneElement') as request, request.method = 'POST', e8.resource = create('Procedure') as procedure, procedure.id = uuid() as uuid8, e8.fullUrl = append('https://example/Procedure/', uuid8), request.url = 'Procedure', activity.outcomeReference = create('Reference') as reference, reference.reference = ('https://example/Procedure/' + %procedure.id) then Procedure(procedureC, patient, encounter, procedure, bundle) "proc";
src.encounter as encounterCDA -> bundle.entry as e3, e3.request = create('BackboneElement') as request, request.method = 'POST', e3.resource = create('Encounter') as encounterFHIR, encounterFHIR.id = uuid() as uuid3, e3.fullUrl = append('https://example/Encounter/', uuid3), request.url = 'Encounter', tgt.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounterFHIR.id) then {
// encounterCDA -> encounterFHIR.partOf = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "encounterHeader";
encounterCDA -> encounterFHIR.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "refPatient";
encounterCDA.id -> encounterFHIR.identifier;
encounterCDA.statusCode -> encounterFHIR.status;
encounterCDA where statusCode.exists().not() -> encounterFHIR.status = 'unknown' "status";
encounterCDA.code as code -> encounterFHIR.class as class then {
code.code as code -> class.code = cast(code, 'string');
code.codeSystem as system -> class.system = translate(system, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri');
code.displayName as display -> class.display = cast(display, 'string');
} "class";
encounterCDA.text as text -> encounterFHIR.type as type then {
text.reference as reference -> type.text = (reference.value) "value";
};
encounterCDA.effectiveTime as effectiveTime -> encounterFHIR.period = create('Period') as period then {
effectiveTime -> period.start = create('dateTime') as start then TSDateTime(effectiveTime, start) "val";
} "efft";
} "viste";
src.act as act then {
act.id -> tgt.identifier;
act.code -> activity.outcomeCodeableConcept;
act.text as text -> activity.progress = create('Annotation') as progress then {
text.reference as reference -> progress.text = (reference.value) "value";
};
act.effectiveTime as effectiveTime -> detail.scheduled = create('Period') as period then {
effectiveTime -> period.start = create('dateTime') as start then TSDateTime(effectiveTime, start) "val";
} "efft";
act -> detail.status = 'completed' "status";
};
} "detail";
} "activityIni";
}
group MedicationRequest(source src : substanceAdministration, target patient : Patient, target encounter : Encounter, target tgt : MedicationRequest, target bundle : Bundle) {
// default + mandatory
src -> tgt.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// src -> tgt.encounter = create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %encounter.id) "reference";
src -> tgt.intent = 'order' "intent";
src where statusCode.exists().not() -> tgt.status = 'unknown' "st";
src.statusCode as sc then {
sc.code as cos -> tgt.status = translate(cos, '#MedicationStatusMap', 'code') "codeS";
} "status";
src.id -> tgt.identifier;
src.text as txt -> tgt.note as note then {
txt.reference as reference -> note.text = (reference.value) "text";
} "note";
src.effectiveTime : IVL_TS as eff -> tgt.dosageInstruction = create('Dosage') as dosage then {
eff -> dosage.timing = create('Timing') as timing then {
eff -> timing.repeat as rep then {
eff -> rep.bounds = create('Period') as value then IVLTSPeriod(eff, value) "valuePeriod";
} "rep";
} "timing";
} "period";
src.effectiveTime : EIVL_TS as effe -> tgt.dosageInstruction = create('Dosage') as dosage then {
effe -> dosage.timing = create('Timing') as timing then {
effe -> timing.repeat as rep then {
effe.eventCode as ev -> rep.when = (ev.code);
} "rep";
} "timing";
} "period";
src.effectiveTime : IVL_TS as eff -> tgt.dosageInstruction = create('Dosage') as dosage, dosage.timing = create('Timing') as timing, timing.event = (eff.value) "tim";
src.effectiveTime : PIVL_TS as eff -> tgt.dosageInstruction = create('Dosage') as dosage then {
eff -> dosage.timing = create('Timing') as timing then periodTiming(eff, timing) "cod";
} "eff";
src where (src.doseQuantity.exists() or src.rateQuantity.exists()) then {
src -> tgt.dosageInstruction = create('Dosage') as dosageInstruction then {
src.doseQuantity as doseQuant then {
doseQuant.originalText as ot then {
ot.reference -> dosageInstruction.text;
} "ot";
doseQuant -> dosageInstruction.doseAndRate as dosageRate then {
doseQuant -> dosageRate.dose = create('Range') as d then {
doseQuant -> d.low = create('SimpleQuantity') as l then {
doseQuant.low as lo -> l.value = (lo.value);
doseQuant.low as lo -> l.unit = (lo.unit);
} "low";
doseQuant -> d.high = create('SimpleQuantity') as h then {
doseQuant.high as hi -> h.value = (hi.value);
doseQuant.high as hi -> h.unit = (hi.unit);
} "low";
} "d";
} "dosageRate";
};
src.rateQuantity as rateQuantity then {
rateQuantity.originalText as ot then {
ot.reference -> dosageInstruction.text;
} "ot";
rateQuantity -> dosageInstruction.doseAndRate as dosageRate then {
rateQuantity -> dosageRate.rate = create('Range') as d then {
rateQuantity -> d.low = create('SimpleQuantity') as l then {
rateQuantity.low as lo -> l.value = (lo.value);
rateQuantity.low as lo -> l.unit = (lo.unit);
} "low";
rateQuantity -> d.high = create('SimpleQuantity') as h then {
rateQuantity.high as hi -> h.value = (hi.value);
rateQuantity.high as hi -> h.unit = (hi.unit);
} "high";
} "r";
} "dosageRate";
} "rate";
src.routeCode -> dosageInstruction.route "route";
src.approachSiteCode -> dosageInstruction.site "site";
src.targetSiteCode -> dosageInstruction.site "site";
} "dosageIn";
} "condition";
src.consumable as consumable -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('Medication') as medication, medication.id = uuid() as uuid1, e1.fullUrl = append('https://example/Medication/', uuid1), request.url = 'Medication', tgt.medication = create('Reference') as medref, medref.reference = ('https://example/Medication/' + %medication.id) then Medication(src, medication, patient, bundle) "medication";
src.entryRelationship as entryRelationship then {
entryRelationship.supply as supply -> tgt.dispenseRequest as dispenseRequest then {
supply.quantity as quantityCDA -> dispenseRequest.quantity as quantityFHIR then {
quantityCDA -> quantityFHIR.value = (quantityCDA.value) "value";
};
};
} "entryR";
src.participant as participant then {
participant then Practitioner(participant, tgt, bundle) "function";
participant.effectiveTime -> tgt.authoredOn "autor";
} "Partecipant";
}
group OrganizationAffiliation(source src : act, target patient : Patient, target enc : Encounter, target tgt : OrganizationAffiliation, target bundle : Bundle) {
src.id -> tgt.identifier;
// src.code -> tgt.specialty as specialty then{
src.statusCode where code = 'active' -> tgt.active = true;
src.statusCode where (code = 'active').not() -> tgt.active = false;
src.effectiveTime as eff -> tgt.period;
// src.code -> tgt.specialty;
src -> tgt.specialty = create('CodeableConcept') as spec then {
src.code as code then {
code -> spec.coding = create('Coding') as cd then {
code -> cd.code = (code.code) "code";
code -> cd.display = (code.displayName) "code";
code.codeSystem as r -> cd.system = translate(r, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri') "root1";
} "cd";
} "spec";
src.entryRelationship as entry then {
entry.act as a then {
a.text as tx then {
tx.reference as reff -> spec.text = (reff.value);
} "ref";
};
} "entry";
} "a";
}
group DiagnosticReportFunction(source src : organizer, target patient : Patient, target enc : Encounter, target tgt : DiagnosticReport, target bundle : Bundle) {
src -> tgt.subject = create('Reference') as reference, reference.reference = ('https://example/Patient/' + %patient.id) "reference";
// src -> tgt.encounter=create('Reference') as reference, reference.reference = ('https://example/Encounter/' + %enc.id) "reference";
src.code -> tgt.code;
src.statusCode where code = 'completed' -> tgt.status = 'final';
src.effectiveTime as eff where (value.exists()) -> tgt.effective = create('dateTime') as value then TSDateTime(eff, value) "value1";
src.effectiveTime as eff where (low.exists()) -> tgt.effective = create('Period') as value then IVLTSPeriod(effectiveTime, value) "valuePeriod";
src.component as component then {
component.observation as observation -> bundle.entry as ei, ei.request = create('BackboneElement') as request, request.method = 'POST', ei.resource = create('Observation') as obsi, obsi.id = uuid() as uuidi, ei.fullUrl = append('https://example/Observation/', uuidi), request.url = 'Observation', tgt.result = create('Reference') as reference, reference.reference = ('https://example/Observation/' + %obsi.id) then Observation(observation, patient, enc, obsi, bundle) "hasMember";
};
}
group EncounterFunction(source src : cdaElement, target patient : Patient, target encounter : Encounter, target tgt : Encounter, target bundle : Bundle) {
src.id -> tgt.identifier;
src.statusCode -> tgt.status;
src where statusCode.exists().not() -> tgt.status = 'unknown' "status";
src.code as code -> tgt.class as class then {
code -> class.code = (code.code) "code";
code -> class.display = (code.displayName) "display";
code.codeSystem as r -> class.system = translate(r, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri') "root1";
} "co";
// src.effectiveTime as effective -> tgt.period as period then{
src where effectiveTime.low.exists() or effectiveTime.high.exists() then {
src.effectiveTime as eff -> tgt.period = create('Period') as period then IVLTSPeriod(eff, period);
} "where";
// effectiveTime = time-stamp
src where effectiveTime.low.exists().not() or effectiveTime.high.exists().not() then {
src.effectiveTime as effectivetime1 -> tgt.period = create('Period') as period then {
effectivetime1 -> period.start = create('dateTime') as start then TSDateTime(effectivetime1, start) "val";
} "efft";
} "where";
// src.effectiveTime as eff where (value.exists()) -> tgt.period = create('dateTime') as value then TSDateTime(eff, value) "value1";
src.text as tx -> tgt.type as ty then {
tx.reference as reff -> ty.text = (reff.value) "textType";
};
src.performer as performer -> tgt.participant as part then {
performer -> part.period as period then {
performer.time as time -> period.start as start then TSDateTime(time, start) "val";
} "period";
performer.assignedEntity as assentity -> bundle.entry as e1, e1.request = create('BackboneElement') as request, request.method = 'POST', e1.resource = create('PractitionerRole') as practitionerRole, practitionerRole.id = uuid() as uuid1, e1.fullUrl = append('https://example/PractitionerRole/', uuid1), request.url = 'PractitionerRole', tgt.participant = create('BackboneElement') as participant1, participant1.individual = create('Reference') as referencepart, referencepart.reference = ('https://example/PractitionerRole/' + %practitionerRole.id) then {
assentity.code -> practitionerRole.code;
assentity -> bundle.entry as e2, e2.request = create('BackboneElement') as request, request.method = 'PUT', e2.resource = create('Practitioner') as practitioner then {
assentity -> practitioner.meta as meta then {
assentity -> meta.tag = create('Coding') as coding then {
assentity -> coding.system = 'http://algoritmodiscoring' "system";
assentity -> coding.code = 'ClinicalDocument/body/encounter/performer' "code";
} "coding";
} "meta";
assentity.id as id -> practitioner.identifier as identifier then {
id.root as r -> identifier.system = translate(r, 'http://hl7.org/fhir/ConceptMap/special-oid2uri', 'uri') "root1";
id.extension as ext -> identifier.value = ext then {
assentity -> request.url = append('Practitioner?identifier=', ext) "UUID";
} "ext";
id.assigningAuthorityName as s -> identifier.assigner as a, a.display = s;
id.root as r then {
id.extension as ext -> practitioner.id = (r + '-' + ext) as uuid2, e2.fullUrl = append('https://example/Practitioner/', uuid2), practitionerRole.practitioner = create('Reference') as reference, reference.reference = ('https://example/Practitioner/' + %practitioner.id) "performer";
} "r";
} "identifier";
assentity.id as id where (root = '2.16.840.1.113883.2.9.4.3.2') then {
id.extension as ext -> request.url = append('Practitioner?identifier=', ext) "UUID";
} "2";
assentity.id as id where (root != '2.16.840.1.113883.2.9.4.3.2') then {
id.extension as ext -> request.url = append('Practitioner?identifier=', ext) "UUID";
} "2";
assentity.addr -> practitioner.address;
assentity.telecom -> practitioner.telecom;
assentity.assignedPerson as person then {
person.name -> practitioner.name;
person.birthTime as birthTime then {
birthTime.value as date -> practitioner.birthDate = truncate(date, 10);
} "birth";
} "name";
} "assignedEntity";
} "performer";
} "01";
}