Genomics Reporting Implementation Guide
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Genomics Reporting Implementation Guide, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 4.0.0-cibuild built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/genomics-reporting/ and changes regularly. See the Directory of published versions

: GenomicSpecimenExample02 - TTL Representation

Page standards status: Informative

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix sct: <http://snomed.info/id/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/Specimen/GenomicSpecimenExample02> a fhir:Specimen ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:Resource.id [ fhir:value "GenomicSpecimenExample02"] ;
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ] ;
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Specimen GenomicSpecimenExample02</b></p><a name=\"GenomicSpecimenExample02\"> </a><a name=\"hcGenomicSpecimenExample02\"> </a><p><b>identifier</b>: <code>http://example.org</code>/123</p><p><b>accessionIdentifier</b>: <code>http://example.org</code>/456</p><p><b>status</b>: Available</p><p><b>type</b>: <span title=\"Codes:{http://snomed.info/sct 258564008}\">Buccal smear sample</span></p><p><b>subject</b>: <a href=\"Patient-CGPatientExample01.html\">Adam B. Everyman  Male, DoB: 1951-01-20 ( Medical Record Number: m123 (use: usual, ))</a></p><h3>Processings</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Time[x]</b></td></tr><tr><td style=\"display: none\">*</td><td>2020-10-05</td></tr></table></div>"
  ] ;
  fhir:Specimen.identifier [
     fhir:index 0 ;
     fhir:Identifier.system [ fhir:value "http://example.org" ] ;
     fhir:Identifier.value [ fhir:value "123" ]
  ] ;
  fhir:Specimen.accessionIdentifier [
     fhir:Identifier.system [ fhir:value "http://example.org" ] ;
     fhir:Identifier.value [ fhir:value "456" ]
  ] ;
  fhir:Specimen.status [ fhir:value "available"] ;
  fhir:Specimen.type [
     fhir:CodeableConcept.coding [
       fhir:index 0 ;
       a sct:258564008 ;
       fhir:Coding.system [ fhir:value "http://snomed.info/sct" ] ;
       fhir:Coding.code [ fhir:value "258564008" ] ;
       fhir:Coding.display [ fhir:value "Buccal smear sample" ]
     ]
  ] ;
  fhir:Specimen.subject [
     fhir:link <http://hl7.org/fhir/Patient/CGPatientExample01> ;
     fhir:Reference.reference [ fhir:value "Patient/CGPatientExample01" ]
  ] ;
  fhir:Specimen.processing [
     fhir:index 0 ;
     fhir:Specimen.processing.timeDateTime [ fhir:value "2020-10-05"^^xsd:date ]
  ] .

<http://hl7.org/fhir/Patient/CGPatientExample01> a fhir:Patient .

# - ontology header ------------------------------------------------------------

<http://hl7.org/fhir/Specimen/GenomicSpecimenExample02.ttl> a owl:Ontology ;
  owl:imports fhir:fhir.ttl ;
  owl:versionIRI <http://build.fhir.org/Specimen/GenomicSpecimenExample02.ttl> .