Situational Awareness for Novel Epidemic Response
1.0.1 - CI Build
Situational Awareness for Novel Epidemic Response
1.0.1 - CI Build
Situational Awareness for Novel Epidemic Response, published by HL7 International / Public Health. This guide is not an authorized publication; it is the continuous build for version 1.0.1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/fhir-saner/ and changes regularly. See the Directory of published versions
| Draft as of 2024-05-18 |
<ValueSet xmlns="http://hl7.org/fhir">
<id value="SARSCoV2GeneticLabs"/>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><ul><li>Include these codes as defined in <a href="http://loinc.org"><code>http://loinc.org</code></a><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href="https://loinc.org/94307-6/">94307-6</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N1</td></tr><tr><td><a href="https://loinc.org/94308-4/">94308-4</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N2</td></tr><tr><td><a href="https://loinc.org/94309-2/">94309-2</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/94310-0/">94310-0</a></td><td>SARS-like coronavirus N gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/94314-2/">94314-2</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/94315-9/">94315-9</a></td><td>SARS-related coronavirus E gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/94316-7/">94316-7</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/94500-6/">94500-6</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/94533-7/">94533-7</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/94534-5/">94534-5</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href="https://loinc.org/94559-2/">94559-2</a></td><td>SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection</td></tr></table></li></ul></div>
</text>
<extension
url="http://hl7.org/fhir/StructureDefinition/structuredefinition-wg">
<valueCode value="pher"/>
</extension>
<url value="http://hl7.org/fhir/uv/saner/ValueSet/SARSCoV2GeneticLabs"/>
<identifier>
<system value="urn:ietf:rfc:3986"/>
<value value="urn:oid:2.16.840.1.113883.4.642.40.42.48.37"/>
</identifier>
<version value="1.0.1"/>
<name value="SARSCoV2GeneticLabs"/>
<title value="SARSCoV2 Genetic Labs"/>
<status value="draft"/>
<experimental value="false"/>
<date value="2024-05-18T21:25:01+00:00"/>
<publisher value="HL7 International / Public Health"/>
<contact>
<telecom>
<system value="url"/>
<value value="http://www.hl7.org/Special/committees/pher"/>
</telecom>
</contact>
<contact>
<telecom>
<system value="email"/>
<value value="pher@lists.hl7.org"/>
</telecom>
</contact>
<contact>
<name value="Keith W. Boone"/>
<telecom>
<system value="email"/>
<value value="mailto:kboone@ainq.com"/>
</telecom>
</contact>
<description
value="This Value Set identifies Lab tests using gene-based testing instead of other methods (e.g., Antibody testing)"/>
<jurisdiction>
<coding>
<system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/>
<code value="001"/>
<display value="World"/>
</coding>
</jurisdiction>
<copyright
value="This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2020, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc"/>
<compose>
<include>
<system value="http://loinc.org"/>
<concept>
<code value="94307-6"/>
<display
value="SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N1"/>
</concept>
<concept>
<code value="94308-4"/>
<display
value="SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by Nucleic acid amplification using CDC primer-probe set N2"/>
</concept>
<concept>
<code value="94309-2"/>
<display
value="SARS-CoV-2 (COVID-19) RNA [Presence] in Unspecified specimen by NAA with probe detection"/>
</concept>
<concept>
<code value="94310-0"/>
<display
value="SARS-like coronavirus N gene [Presence] in Unspecified specimen by NAA with probe detection"/>
</concept>
<concept>
<code value="94314-2"/>
<display
value="SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Unspecified specimen by NAA with probe detection"/>
</concept>
<concept>
<code value="94315-9"/>
<display
value="SARS-related coronavirus E gene [Presence] in Unspecified specimen by NAA with probe detection"/>
</concept>
<concept>
<code value="94316-7"/>
<display
value="SARS-CoV-2 (COVID-19) N gene [Presence] in Unspecified specimen by NAA with probe detection"/>
</concept>
<concept>
<code value="94500-6"/>
<display
value="SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection"/>
</concept>
<concept>
<code value="94533-7"/>
<display
value="SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection"/>
</concept>
<concept>
<code value="94534-5"/>
<display
value="SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection"/>
</concept>
<concept>
<code value="94559-2"/>
<display
value="SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection"/>
</concept>
</include>
</compose>
</ValueSet>
IG © 2020+ HL7 International / Public Health. Package hl7.fhir.uv.saner#1.0.1 based on FHIR 4.0.1. Generated 2024-05-18
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