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Specimendefinition-example-serum-plasma.ttl

Orders and Observations Work GroupMaturity Level: N/AStandards Status: InformativeCompartments: Not linked to any defined compartments

Raw Turtle (+ also see Turtle/RDF Format Specification)

Example definition of serum or plasma specimen.

@prefix fhir: <http://hl7.org/fhir/> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix sct: <http://snomed.info/sct/> .

# - resource -------------------------------------------------------------------

[] a fhir:SpecimenDefinition;
  fhir:Resource.id [ fhir:value "2364"];
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ]
  ];
  fhir:SpecimenDefinition.status [ fhir:value "active"];
  fhir:SpecimenDefinition.typeCollected [
     a sct:122555007;
     fhir:CodeableConcept.coding [
       a sct:122555007;
       fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
       fhir:Coding.code [ fhir:value "122555007" ];
       fhir:Coding.display [ fhir:value "Venous blood specimen" ]
     ]
  ];
  fhir:SpecimenDefinition.patientPreparation [
     fhir:CodeableConcept.text [ fhir:value "12 hour fasting" ]
  ], [
     a sct:263678003;
     fhir:CodeableConcept.coding [
       a sct:263678003;
       fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
       fhir:Coding.code [ fhir:value "263678003" ];
       fhir:Coding.display [ fhir:value "At rest" ]
     ]
  ];
  fhir:SpecimenDefinition.timeAspect [ fhir:value "preferrably morning time"];
  fhir:SpecimenDefinition.typeTested [
     fhir:SpecimenDefinitionTypeTestedComponent.type [
       a sct:119364003;
       fhir:CodeableConcept.coding [
         a sct:119364003;
         fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
         fhir:Coding.code [ fhir:value "119364003" ];
         fhir:Coding.display [ fhir:value "Serum specimen" ]
       ]
     ];
     fhir:SpecimenDefinitionTypeTestedComponent.preference [ fhir:value "preferred" ];
     fhir:SpecimenDefinitionTypeTestedComponent.container [
       fhir:SpecimenDefinitionTypeTestedContainerComponent.material [
         a sct:61088005;
         fhir:CodeableConcept.coding [
           a sct:61088005;
           fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
           fhir:Coding.code [ fhir:value "61088005" ];
           fhir:Coding.display [ fhir:value "plastic" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedContainerComponent.type [
         a sct:702281005;
         fhir:CodeableConcept.coding [
           a sct:702281005;
           fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
           fhir:Coding.code [ fhir:value "702281005" ];
           fhir:Coding.display [ fhir:value "Evacuated blood collection tube, thrombin/clot activator/gel separator" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedContainerComponent.cap [
         fhir:CodeableConcept.coding [
           fhir:Coding.system [ fhir:value "urn:iso:std:iso:6710:2017" ];
           fhir:Coding.code [ fhir:value "yellow" ];
           fhir:Coding.display [ fhir:value "yellow cap" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedContainerComponent.minimumVolume [
         fhir:Quantity.value [ fhir:value "2" ];
         fhir:Quantity.unit [ fhir:value "ml" ];
         fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
         fhir:Quantity.code [ fhir:value "mL" ]
       ]
     ];
     fhir:SpecimenDefinitionTypeTestedComponent.handling [
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.temperatureQualifier [
         fhir:CodeableConcept.text [ fhir:value "Ambient temperature" ]
       ];
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.temperatureRange [
         fhir:Range.low [
           fhir:Quantity.value [ fhir:value "15" ];
           fhir:Quantity.unit [ fhir:value "°C" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "Cel" ]
         ];
         fhir:Range.high [
           fhir:Quantity.value [ fhir:value "25" ];
           fhir:Quantity.unit [ fhir:value "°C" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "Cel" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.maxDuration [
         fhir:Duration.maxDuration [
           fhir:Quantity.value [ fhir:value "60" ];
           fhir:Quantity.unit [ fhir:value "minute" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "min" ]
         ]
       ]
     ], [
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.temperatureQualifier [
         fhir:CodeableConcept.text [ fhir:value "Refrigerated temperature" ]
       ];
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.temperatureRange [
         fhir:Range.low [
           fhir:Quantity.value [ fhir:value "2" ];
           fhir:Quantity.unit [ fhir:value "°C" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "Cel" ]
         ];
         fhir:Range.high [
           fhir:Quantity.value [ fhir:value "8" ];
           fhir:Quantity.unit [ fhir:value "°C" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "Cel" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.maxDuration [
         fhir:Duration.maxDuration [
           fhir:Quantity.value [ fhir:value "8" ];
           fhir:Quantity.unit [ fhir:value "hour" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "h" ]
         ]
       ]
     ]
  ], [
     fhir:SpecimenDefinitionTypeTestedComponent.type [
       a sct:119361006;
       fhir:CodeableConcept.coding [
         a sct:119361006;
         fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
         fhir:Coding.code [ fhir:value "119361006" ];
         fhir:Coding.display [ fhir:value "Plasma specimen" ]
       ]
     ];
     fhir:SpecimenDefinitionTypeTestedComponent.preference [ fhir:value "alternate" ];
     fhir:SpecimenDefinitionTypeTestedComponent.container [
       fhir:SpecimenDefinitionTypeTestedContainerComponent.material [
         a sct:32039001;
         fhir:CodeableConcept.coding [
           a sct:32039001;
           fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
           fhir:Coding.code [ fhir:value "32039001" ];
           fhir:Coding.display [ fhir:value "glass" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedContainerComponent.type [
         a sct:702281005;
         fhir:CodeableConcept.coding [
           a sct:702281005;
           fhir:Coding.system [ fhir:value "http://snomed.info/sct" ];
           fhir:Coding.code [ fhir:value "702281005" ];
           fhir:Coding.display [ fhir:value "Evacuated blood collection tube, thrombin/clot activator/gel separator" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedContainerComponent.cap [
         fhir:CodeableConcept.coding [
           fhir:Coding.system [ fhir:value "urn:iso:std:iso:6710:2017" ];
           fhir:Coding.code [ fhir:value "green" ];
           fhir:Coding.display [ fhir:value "green cap" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedContainerComponent.minimumVolume [
         fhir:Quantity.value [ fhir:value "2" ];
         fhir:Quantity.unit [ fhir:value "ml" ];
         fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
         fhir:Quantity.code [ fhir:value "mL" ]
       ]
     ];
     fhir:SpecimenDefinitionTypeTestedComponent.rejectionCriterion [
       fhir:CodeableConcept.coding [
         fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/rejection-criteria" ];
         fhir:Coding.code [ fhir:value "insufficient" ];
         fhir:Coding.display [ fhir:value "insufficient specimen volume" ]
       ]
     ], [
       fhir:CodeableConcept.coding [
         fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/rejection-criteria" ];
         fhir:Coding.code [ fhir:value "hemolized" ];
         fhir:Coding.display [ fhir:value "hemolized specimen" ]
       ]
     ];
     fhir:SpecimenDefinitionTypeTestedComponent.handling [
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.temperatureQualifier [
         fhir:CodeableConcept.text [ fhir:value "Ambient temperature" ]
       ];
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.temperatureRange [
         fhir:Range.low [
           fhir:Quantity.value [ fhir:value "15" ];
           fhir:Quantity.unit [ fhir:value "°C" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "Cel" ]
         ];
         fhir:Range.high [
           fhir:Quantity.value [ fhir:value "25" ];
           fhir:Quantity.unit [ fhir:value "°C" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "Cel" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.maxDuration [
         fhir:Duration.maxDuration [
           fhir:Quantity.value [ fhir:value "60" ];
           fhir:Quantity.unit [ fhir:value "minute" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "min" ]
         ]
       ]
     ], [
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.temperatureQualifier [
         fhir:CodeableConcept.text [ fhir:value "Refrigerated temperature" ]
       ];
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.temperatureRange [
         fhir:Range.low [
           fhir:Quantity.value [ fhir:value "2" ];
           fhir:Quantity.unit [ fhir:value "°C" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "Cel" ]
         ];
         fhir:Range.high [
           fhir:Quantity.value [ fhir:value "8" ];
           fhir:Quantity.unit [ fhir:value "°C" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "Cel" ]
         ]
       ];
       fhir:SpecimenDefinitionTypeTestedHandlingComponent.maxDuration [
         fhir:Duration.maxDuration [
           fhir:Quantity.value [ fhir:value "8" ];
           fhir:Quantity.unit [ fhir:value "hour" ];
           fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
           fhir:Quantity.code [ fhir:value "h" ]
         ]
       ]
     ]
  ] .

# -------------------------------------------------------------------------------------


Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.