SGHI FHIR Profile Implementation Guide
0.1.0 - ci-build
SGHI FHIR Profile Implementation Guide, published by Kathurima Kimathi. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/savannahghi/sil_fhir_profile_ig/ and changes regularly. See the Directory of published versions
| Official URL: https://fhir.slade360.co.ke/fhir/StructureMap/ExtractIcuObservationChart | Version: 0.1.0 | |||
| Active as of 2026-09-14 | Computable Name: ExtractIcuObservationChart | |||
Each round out as: the four vitals and the central venous pressure as their own Observations; the arterial blood gas as one panel with seven components, because a gas is interpreted whole and a pH of 7.25 means one thing beside a pCO2 of 8 and another beside a bicarbonate of 12; and the ventilator settings as a second panel. Every one takes the round's own time rather than the form's – a deteriorating gas exchange is only visible as a series, and collapsing twenty-four rounds onto one instant would destroy it.
/// url = 'https://fhir.slade360.co.ke/fhir/StructureMap/ExtractIcuObservationChart' /// name = 'ExtractIcuObservationChart' /// title = 'ICU Observation Chart Extraction' /// status = 'active' /// description = 'Each round out as: the four vitals and the central venous pressure as their own Observations; the arterial blood gas as one panel with seven components, because a gas is interpreted whole and a pH of 7.25 means one thing beside a pCO2 of 8 and another beside a bicarbonate of 12; and the ventilator settings as a second panel. Every one takes the round\'s own time rather than the form\'s -- a deteriorating gas exchange is only visible as a series, and collapsing twenty-four rounds onto one instant would destroy it.' uses "http://hl7.org/fhir/StructureDefinition/QuestionnaireResponse" alias QR as source uses "http://hl7.org/fhir/StructureDefinition/Bundle" alias Bundle as target uses "http://hl7.org/fhir/StructureDefinition/Observation" alias Observation as target group ExtractIcuObservationChart(source qr : QR, target bundle : Bundle) { qr -> bundle.type = 'transaction' "setBundleType"; qr.item as g where (linkId = 'unit') then { g.item as it where ((linkId = 'unit/day-in-unit') and answer.value.exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetSurveyCategory(qr, obs) "category"; it -> obs.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'obs-day-in-unit' "cd"; it -> cg.display = 'Day in unit' "dsp"; } "coding"; } "code"; it.answer first as a then { a.value as v -> obs.value = v "set"; }; } "measure_labour_stage_duration"; g.item as it where ((linkId = 'unit/diagnosis') and answer.value.exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetSurveyCategory(qr, obs) "category"; it -> obs.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '11450-4' "cd"; it -> cg.display = 'Problem list - Reported' "dsp"; } "coding"; it -> cc.text = 'Diagnosis on the ICU observation chart' "codeText"; } "code"; it.answer first as a then { a.value as txt -> obs.note as n, n.text = txt "text"; }; } "narr_11450_4"; g.item as it where ((linkId = 'unit/instructions') and answer.value.exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetSurveyCategory(qr, obs) "category"; it -> obs.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '18776-5' "cd"; it -> cg.display = 'Plan of care note' "dsp"; } "coding"; it -> cc.text = 'Instructions on the ICU observation chart' "codeText"; } "code"; it.answer first as a then { a.value as txt -> obs.note as n, n.text = txt "text"; }; } "narr_18776_5"; } "unitGroup"; // ── One round ─────────────────────────────────────────────────────────── qr.item as g where (linkId = 'round') then { g.item as it where ((linkId = 'round/vitals/temperature') and answer.value.ofType(Quantity).exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetVitalSignsCategory(qr, obs) "category"; it -> obs.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '8310-5' "cd"; it -> cg.display = 'Body temperature' "dsp"; } "coding"; } "code"; it.answer first as a then { a.value as v -> obs.value = v; }; g -> obs then SetRoundTime(g, obs) "roundTime"; } "vital_8310_5"; g.item as it where ((linkId = 'round/vitals/pulse') and answer.value.ofType(Quantity).exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetVitalSignsCategory(qr, obs) "category"; it -> obs.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '8867-4' "cd"; it -> cg.display = 'Heart rate' "dsp"; } "coding"; } "code"; it.answer first as a then { a.value as v -> obs.value = v; }; g -> obs then SetRoundTime(g, obs) "roundTime"; } "vital_8867_4"; g.item as it where ((linkId = 'round/vitals/respiratory-rate') and answer.value.ofType(Quantity).exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetVitalSignsCategory(qr, obs) "category"; it -> obs.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '9279-1' "cd"; it -> cg.display = 'Respiratory rate' "dsp"; } "coding"; } "code"; it.answer first as a then { a.value as v -> obs.value = v; }; g -> obs then SetRoundTime(g, obs) "roundTime"; } "vital_9279_1"; g.item as it where ((linkId = 'round/cvp') and answer.value.ofType(Quantity).exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetVitalSignsCategory(qr, obs) "category"; it -> obs.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '60985-9' "cd"; it -> cg.display = 'Central venous pressure (CVP)' "dsp"; } "coding"; } "code"; it.answer first as a then { a.value as v -> obs.value = v; }; g -> obs then SetRoundTime(g, obs) "roundTime"; } "vital_60985_9"; // Blood pressure as typed. The chart is a graph with a systolic and a // diastolic plotted against each other; the digital form takes the pair as // one string rather than parsing it, because a mis-parsed blood pressure is // worse than a legible one. g.item as it where ((linkId = 'round/vitals/blood-pressure') and answer.value.exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetVitalSignsCategory(qr, obs) "category"; it -> obs.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '85354-9' "cd"; it -> cg.display = 'Blood pressure panel with all children optional' "dsp"; } "coding"; } "code"; it.answer first as a then { a.value as txt -> obs.note as n, n.text = txt "bpText"; }; g -> obs then SetRoundTime(g, obs) "roundTime"; } "roundBloodPressure"; // ── The arterial blood gas, as one panel ────────────────────────────── g.item as abg where ((linkId = 'round/abg') and item.answer.value.exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetLaboratoryCategory(qr, obs) "category"; abg -> obs.code as cc then { abg -> cc.coding as cg then { abg -> cg.system = 'http://loinc.org' "sys"; abg -> cg.code = '24336-0' "cd"; abg -> cg.display = 'Gas panel - Arterial blood' "dsp"; } "coding"; } "code"; abg.item as it where ((linkId = 'round/abg/ph') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '2744-1' "cd"; it -> cg.display = 'pH of Arterial blood' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_2744_1"; abg.item as it where ((linkId = 'round/abg/co2') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '2019-8' "cd"; it -> cg.display = 'Carbon dioxide [Partial pressure] in Arterial blood' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_2019_8"; abg.item as it where ((linkId = 'round/abg/po2') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '2703-7' "cd"; it -> cg.display = 'Oxygen [Partial pressure] in Arterial blood' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_2703_7"; abg.item as it where ((linkId = 'round/abg/base-excess') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '11555-0' "cd"; it -> cg.display = 'Base excess in Blood by calculation' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_11555_0"; abg.item as it where ((linkId = 'round/abg/bicarbonate') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '1963-8' "cd"; it -> cg.display = 'Bicarbonate [Moles/volume] in Serum or Plasma' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_1963_8"; abg.item as it where ((linkId = 'round/abg/sodium') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '2947-0' "cd"; it -> cg.display = 'Sodium [Moles/volume] in Blood' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_2947_0"; abg.item as it where ((linkId = 'round/abg/potassium') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '2823-3' "cd"; it -> cg.display = 'Potassium [Moles/volume] in Serum or Plasma' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_2823_3"; g -> obs then SetRoundTime(g, obs) "roundTime"; } "arterialBloodGas"; // ── The ventilator, as a second panel ───────────────────────────────── // Together and not fifteen loose Observations: a setting only means // something beside the others. A tidal volume of 400 mL is unremarkable at // a rate of 12 and dangerous at a rate of 35. g.item as v where ((linkId = 'round/ventilation') and item.answer.value.exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetExamCategory(qr, obs) "category"; v -> obs.code as cc then { v -> cc.coding as cg then { v -> cg.system = 'http://loinc.org' "sys"; v -> cg.code = '20124-4' "cd"; v -> cg.display = 'Ventilation mode Ventilator' "dsp"; } "coding"; v -> cc.text = 'Ventilator settings on the ICU observation chart' "codeText"; } "code"; v.item as it where ((linkId = 'round/ventilation/mode') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '20124-4' "cd"; it -> cg.display = 'Ventilation mode Ventilator' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_20124_4"; v.item as it where ((linkId = 'round/ventilation/pressure-support') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '20079-0' "cd"; it -> cg.display = 'Pressure support setting Ventilator' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_20079_0"; v.item as it where ((linkId = 'round/ventilation/rate-set') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '19834-1' "cd"; it -> cg.display = 'Breath rate setting Ventilator' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_19834_1"; v.item as it where ((linkId = 'round/ventilation/rate-patient') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '9279-1' "cd"; it -> cg.display = 'Respiratory rate' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_9279_1"; v.item as it where ((linkId = 'round/ventilation/tidal-volume-set') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '20112-9' "cd"; it -> cg.display = 'Tidal volume setting Ventilator' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_20112_9"; v.item as it where ((linkId = 'round/ventilation/tidal-volume-actual') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'ventilator-setting-tidal-volume-actual' "cd"; it -> cg.display = 'Tidal volume actual' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_ventilator_setting_tidal_volume_actual"; v.item as it where ((linkId = 'round/ventilation/oxygen') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '3151-8' "cd"; it -> cg.display = 'Inhaled oxygen flow rate' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_3151_8"; v.item as it where ((linkId = 'round/ventilation/fio2') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'http://loinc.org' "sys"; it -> cg.code = '3150-0' "cd"; it -> cg.display = 'Inhaled oxygen concentration' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_3150_0"; v.item as it where ((linkId = 'round/ventilation/ie-ratio') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'ventilator-setting-inspiratory-to-expiratory-ratio' "cd"; it -> cg.display = 'Inspiratory to expiratory ratio' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_ventilator_setting_inspiratory_to_expiratory_ratio"; v.item as it where ((linkId = 'round/ventilation/trach-size') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'ventilator-setting-tracheostomy-tube-size' "cd"; it -> cg.display = 'Tracheostomy tube size' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_ventilator_setting_tracheostomy_tube_size"; v.item as it where ((linkId = 'round/ventilation/endo-tube-size') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'ventilator-setting-endotracheal-tube-size' "cd"; it -> cg.display = 'Endotracheal tube size' "dsp"; } "coding"; } "code"; it -> comp then SetComponentValue(it, comp) "value"; } "comp_ventilator_setting_endotracheal_tube_size"; v.item as it where ((linkId = 'round/ventilation/assist-control') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'ventilator-setting-assist-control-in-use' "cd"; it -> cg.display = 'Assist control in use' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_ventilator_setting_assist_control_in_use"; v.item as it where ((linkId = 'round/ventilation/cuff-deflated') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'ventilator-setting-cuff-deflated' "cd"; it -> cg.display = 'Cuff deflated' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_ventilator_setting_cuff_deflated"; v.item as it where ((linkId = 'round/ventilation/spontaneous-breathing') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'ventilator-setting-breathing-spontaneously' "cd"; it -> cg.display = 'Breathing spontaneously' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_ventilator_setting_breathing_spontaneously"; v.item as it where ((linkId = 'round/ventilation/weaning') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'ventilator-setting-weaning-from-the-ventilator' "cd"; it -> cg.display = 'Weaning from the ventilator' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_ventilator_setting_weaning_from_the_ventilator"; g -> obs then SetRoundTime(g, obs) "roundTime"; } "ventilatorSettings"; // ── Nursing care done on the round ──────────────────────────────────── // Its own panel. Turning, suctioning and chest physiotherapy are what // prevent the two complications this population dies of, and the chart is // where they are evidenced. g.item as c where ((linkId = 'round/care') and item.answer.value.exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetProcedureCategory(qr, obs) "category"; c -> obs.code as cc then { c -> cc.coding as cg then { c -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; c -> cg.code = 'icu-care-intensive-care-nursing-round' "cd"; c -> cg.display = 'Intensive care nursing round' "dsp"; } "coding"; } "code"; c.item as it where ((linkId = 'round/care/nebulizer') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'icu-care-nebuliser-given' "cd"; it -> cg.display = 'Nebuliser given' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_icu_care_nebuliser_given"; c.item as it where ((linkId = 'round/care/physiotherapy') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'icu-care-chest-physiotherapy-given' "cd"; it -> cg.display = 'Chest physiotherapy given' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_icu_care_chest_physiotherapy_given"; c.item as it where ((linkId = 'round/care/suction') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'icu-care-suctioned' "cd"; it -> cg.display = 'Suctioned' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_icu_care_suctioned"; c.item as it where ((linkId = 'round/care/sigh') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'icu-care-sighs-given' "cd"; it -> cg.display = 'Sighs given' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_icu_care_sighs_given"; c.item as it where ((linkId = 'round/care/position') and answer.value.exists()) -> obs.component as comp then { it -> comp.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'icu-care-position-of-the-patient' "cd"; it -> cg.display = 'Position of the patient' "dsp"; } "coding"; } "code"; it -> comp then SetComponentCodedValue(it, comp) "value"; } "comp_icu_care_position_of_the_patient"; g -> obs then SetRoundTime(g, obs) "roundTime"; } "nursingCare"; g.item as it where ((linkId = 'round/remarks') and answer.value.exists()) -> bundle.entry as entry, entry.resource = create('Observation') as obs then { qr -> obs, entry then BuildObsBase(qr, obs, entry) "base"; qr -> obs then SetSurveyCategory(qr, obs) "category"; it -> obs.code as cc then { it -> cc.coding as cg then { it -> cg.system = 'https://fhir.slade360.co.ke/fhir/CodeSystem/concept-codesystem' "sys"; it -> cg.code = 'icu-care-remarks-on-an-intensive-care-round' "cd"; it -> cg.display = 'Remarks on an intensive care round' "dsp"; } "coding"; } "code"; it.answer first as a then { a.value as txt -> obs.note as n, n.text = txt "text"; }; } "narr_icu_care_remarks_on_an_intensive_care_round"; } "roundRows"; } // The round's own time, on every Observation from that round. A time and not a // dateTime on the paper, so it rides as a note: the chart's columns are clock // hours across a 24-hour sheet and the date comes from the response. group SetRoundTime(source g, target obs : Observation) { g.item as it where ((linkId = 'round/time') and answer.value.exists()) then { it.answer first as a then { a.value as t -> obs.note as n, n.text = 'Taken at the clock time recorded for this round on the chart' "timeNote"; }; } "roundTimeRule"; g.item as it where ((linkId = 'round/recorded-by') and answer.value.exists()) then { it.answer first as a then { a.value as ref -> obs.performer = ref "performer"; }; } "recordedByRule"; } // ───────────────────────────────────────────────────────────────────────────── // Shared scaffolding. Repeated in each map rather than imported: the transform // engine resolves `imports` against whatever StructureMaps happen to be on the // server, and a form that stops extracting because a shared map was not // uploaded is a worse failure than a duplicated group. // Two notes on what the publisher's StructureMap validator says about this file. // Source parameters below are left untyped on purpose. Writing `: Element` makes // the validator compare QuestionnaireResponse.item against the literal 'Element' // and report them as incompatible with each other, which is noise, not a finding. // `evaluate(context, expression)` is flagged as "takes 1 parameter but 2 were // found". Leave it. The FML parser in the same jar refuses the one-argument form // outright -- it wants a parameter, a comma, then the FHIRPath -- so the // publisher is objecting to what its own compiler emits. Two arguments is the // only form that compiles, and it is what the R5 transform engine executes. // ───────────────────────────────────────────────────────────────────────────── group BuildObsBase(source qr : QR, target obs : Observation, target entry) { qr -> obs then SetResponseProvenance(qr, obs) "responseProvenance"; qr -> obs.id = uuid() then SetObservationFullUrl(obs, entry) "idAndFullUrl"; qr -> entry.request as request then { qr -> request.method = 'POST' "requestMethod"; qr -> request.url = 'Observation' "requestUrl"; } "entryRequest"; qr -> obs.status = 'final' "status"; qr.subject as s -> obs.subject = s; qr.encounter as e -> obs.encounter = e; qr.authored as t -> obs.effective = t "effective"; qr.source as src -> obs.performer = src "performerFromSource"; qr where (source.exists().not()) then { qr.author as a -> obs.performer = a "performerFromAuthor"; } "performerFallback"; // A stored response's id already reads "QuestionnaireResponse/<id>", so it is // a relative reference as it stands. The hasValue() guard is what stops an // unsaved response -- one posted straight to $extract rather than saved first // -- from writing "QuestionnaireResponse/null" into the record. qr.id as qid where ($this.hasValue()) -> obs.derivedFrom = create('Reference') as ref, ref.reference = qid "linkQuestionnaireResponse"; } group SetObservationFullUrl(source obs : Observation, target entry) { obs.id as id -> entry.fullUrl = append('https://fhir.slade360.co.ke/fhir/Observation/', id) "assignFullUrl"; } // The two answer shapes a component can carry. Both read the answer through the // untyped `.value` accessor: reading `valueCoding` or `valueQuantity` by its // typed property name fails at transform time on HAPI R5 with "Attempt to read // invalid property ... on QuestionnaireResponse.item.answer". group SetComponentCodedValue(source it, target comp) { it.answer first as a then { a.value as cv -> comp.value = create('CodeableConcept') as cc then { cv -> cc.coding = cv "valueCoding"; cv.display as d -> cc.text = d "valueText"; } "codedValue"; } "componentAnswer"; } group SetComponentValue(source it, target comp) { it.answer first as a then { a.value as v -> comp.value = v "plainValue"; } "componentAnswer"; } group SetSurveyCategory(source qr : QR, target obs : Observation) { qr -> obs.category as cat then { qr -> cat.coding as coding then { qr -> coding.system = 'http://terminology.hl7.org/CodeSystem/observation-category' "categorySystem"; qr -> coding.code = 'survey' "categoryCode"; qr -> coding.display = 'Survey' "categoryDisplay"; } "categoryCoding"; } "category"; } group SetVitalSignsCategory(source qr : QR, target obs : Observation) { qr -> obs.category as cat then { qr -> cat.coding as coding then { qr -> coding.system = 'http://terminology.hl7.org/CodeSystem/observation-category' "categorySystem"; qr -> coding.code = 'vital-signs' "categoryCode"; qr -> coding.display = 'Vital Signs' "categoryDisplay"; } "categoryCoding"; } "category"; } group SetLaboratoryCategory(source qr : QR, target obs : Observation) { qr -> obs.category as cat then { qr -> cat.coding as coding then { qr -> coding.system = 'http://terminology.hl7.org/CodeSystem/observation-category' "categorySystem"; qr -> coding.code = 'laboratory' "categoryCode"; qr -> coding.display = 'Laboratory' "categoryDisplay"; } "categoryCoding"; } "category"; } group SetExamCategory(source qr : QR, target obs : Observation) { qr -> obs.category as cat then { qr -> cat.coding as coding then { qr -> coding.system = 'http://terminology.hl7.org/CodeSystem/observation-category' "categorySystem"; qr -> coding.code = 'exam' "categoryCode"; qr -> coding.display = 'Exam' "categoryDisplay"; } "categoryCoding"; } "category"; } group SetProcedureCategory(source qr : QR, target obs : Observation) { qr -> obs.category as cat then { qr -> cat.coding as coding then { qr -> coding.system = 'http://terminology.hl7.org/CodeSystem/observation-category' "categorySystem"; qr -> coding.code = 'procedure' "categoryCode"; qr -> coding.display = 'Procedure' "categoryDisplay"; } "categoryCoding"; } "category"; } // ── Provenance and tenancy ─────────────────────────────────────────────────── // Two tags on everything this map creates. The first says which questionnaire // produced it, so a form that reopens mid-admission recalls its own earlier // entries and not another form's. The second copies the tenant tags off the // response, because nothing else on the path puts them there. // The code is the form's document type, not the questionnaire's id: every // environment mints its own ids, and there is only one set of maps, so an id // here would tie the tag to whichever environment stamped it. // ── Provenance and tenancy ─────────────────────────────────────────────────── group SetResponseProvenance(source qr : QR, target r) { qr -> r.meta as m then { qr -> m.tag as t then { qr -> t.system = 'http://slade360edi.com/questionnaire-provenance' "provenanceSystem"; qr -> t.code = 'icu-observation-chart' "provenanceCode"; qr -> t.display = 'ICU observation chart' "provenanceDisplay"; } "provenanceTag"; } "provenanceMeta"; // Every tag the response carries, onto the resource. `meta` is 0..1, so this // lands on the same meta the rule above created rather than a second one. qr.meta as qm then { qm.tag as qt -> r.meta as m, m.tag = qt "copyTag"; } "tenantTags"; }