INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/qligier/simple-test-ig --branch test-pr2 repo DEBUG:root:Time to deadline 35879.998054 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.630943 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35878.26159 seconds npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported added 120 packages in 4s 8 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 10.8.3 npm notice Changelog: npm notice Run `npm install -g npm@10.8.3` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/qligier/simple-test-ig/ -out /scratch/repo DEBUG:root:Time to deadline 35873.426427 seconds FHIR IG Publisher Version 1.6.22 (Git# 33e2566af5b4). Built 2024-08-28T19:21:55.278Z (11 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/qligier/simple-test-ig/ -out /scratch/repo Start Clock @ Monday, September 9, 2024, 1:41:53 PM Coordinated Universal Time (2024-09-09T13:41:53Z) Build FHIR IG from /scratch/repo (00:00.028 / 00:00.029, 89Mb) API keys loaded from /etc/fhir-settings.json (00:00.004 / 00:00.033, 89Mb) Package Cache: /var/lib/.fhir/packages (00:00.003 / 00:00.036, 89Mb) Run Sushi on /scratch/repo (00:00.006 / 00:00.043, 89Mb) Sushi: info Running SUSHI v3.11.1 (implements FHIR Shorthand specification v3.0.0-ballot) (00:00.646 / 00:00.690, 97Mb) Sushi: info Arguments: (00:00.000 / 00:00.690, 97Mb) Sushi: info --require-latest (00:00.000 / 00:00.690, 97Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:00.691, 97Mb) Sushi: info /scratch/repo (00:00.000 / 00:00.691, 97Mb) Sushi: info Extracting FSHOnly configuration from input/ch.fhir.ig.ch-ig.xml... (00:00.979 / 00:01.671, 97Mb) Sushi: info Extracted configuration: (00:00.000 / 00:01.671, 97Mb) Sushi: info id: "ch.fhir.ig.ch-ig" (00:00.000 / 00:01.672, 97Mb) Sushi: info canonical: "http://fhir.ch/ig/ch-ig" (00:00.000 / 00:01.672, 97Mb) Sushi: info url: "http://fhir.ch/ig/ch-ig/ImplementationGuide/ch.fhir.ig.ch-ig" (00:00.000 / 00:01.672, 97Mb) Sushi: info name: "CH_IG" (00:00.000 / 00:01.673, 97Mb) Sushi: info packageId: "ch.fhir.ig.ch-ig" (00:00.000 / 00:01.673, 97Mb) Sushi: info version: "0.1.0" (00:00.000 / 00:01.673, 97Mb) Sushi: info status: "active" (00:00.000 / 00:01.674, 97Mb) Sushi: info fhirVersion[0]: "4.0.1" (00:00.000 / 00:01.675, 97Mb) Sushi: info dependencies: undefined (00:00.000 / 00:01.675, 97Mb) Sushi: info parameters[0]: {"code":"releaselabel","value":"CI Build","fhir_comments":[" IG Parameters "]} (00:00.000 / 00:01.675, 97Mb) Sushi: info parameters[1]: {"code":"path-pages","value":"input/pages"} (00:00.000 / 00:01.676, 97Mb) Sushi: info parameters[2]: {"code":"copyrightyear","value":"2020+"} (00:00.000 / 00:01.676, 97Mb) Sushi: info parameters[3]: {"code":"special-url","value":"http://ihe.net/fhir/"} (00:00.000 / 00:01.676, 97Mb) Sushi: info parameters[4]: {"code":"foo","value":"bar"} (00:00.000 / 00:01.677, 97Mb) Sushi: info FSHOnly: true (00:00.000 / 00:01.677, 97Mb) Sushi: info Importing FSH text... (00:00.000 / 00:01.677, 97Mb) Sushi: info Preprocessed 1 documents with 0 aliases. (00:00.046 / 00:01.724, 97Mb) Sushi: info Imported 0 definitions and 2 instances. (00:00.005 / 00:01.729, 97Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.fhir.uv.tools#current... (00:00.001 / 00:01.731, 97Mb) Sushi: info Did not find hl7.fhir.uv.tools#current in /home/fhiruser/.fhir/packages. (00:00.041 / 00:01.773, 97Mb) Sushi: info Downloading hl7.fhir.uv.tools#current... https://build.fhir.org/ig/FHIR/fhir-tools-ig/branches/master/package.tgz (00:00.119 / 00:01.893, 97Mb) Sushi: info Downloaded hl7.fhir.uv.tools#current (00:00.017 / 00:01.910, 97Mb) Sushi: info Loaded package hl7.fhir.uv.tools#current (00:00.114 / 00:02.025, 97Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.terminology.r4#6.0.2... (00:00.480 / 00:02.505, 97Mb) Sushi: info Did not find hl7.terminology.r4#6.0.2 in /home/fhiruser/.fhir/packages. (00:00.033 / 00:02.538, 97Mb) Sushi: info Downloading hl7.terminology.r4#6.0.2... https://packages.fhir.org/hl7.terminology.r4/6.0.2 (00:00.000 / 00:02.539, 97Mb) Sushi: info Downloaded hl7.terminology.r4#6.0.2 (00:01.953 / 00:04.493, 97Mb) Sushi: info Loaded package hl7.terminology.r4#6.0.2 (00:02.329 / 00:06.822, 97Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.fhir.uv.extensions.r4#5.1.0... (00:00.447 / 00:07.270, 97Mb) Sushi: info Did not find hl7.fhir.uv.extensions.r4#5.1.0 in /home/fhiruser/.fhir/packages. (00:00.536 / 00:07.807, 97Mb) Sushi: info Downloading hl7.fhir.uv.extensions.r4#5.1.0... https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.1.0 (00:00.000 / 00:07.807, 97Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.1.0 (00:01.804 / 00:09.612, 97Mb) Sushi: info Loaded package hl7.fhir.uv.extensions.r4#5.1.0 (00:01.399 / 00:11.011, 97Mb) Sushi: info Checking /home/fhiruser/.fhir/packages for hl7.fhir.r4.core#4.0.1... (00:00.000 / 00:11.011, 97Mb) Sushi: info Did not find hl7.fhir.r4.core#4.0.1 in /home/fhiruser/.fhir/packages. (00:00.792 / 00:11.803, 97Mb) Sushi: info Downloading hl7.fhir.r4.core#4.0.1... https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:11.803, 97Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:02.839 / 00:14.643, 97Mb) Sushi: info Loaded package hl7.fhir.r4.core#4.0.1 (00:03.252 / 00:17.896, 97Mb) Sushi: info Converting FSH to FHIR resources... (00:00.017 / 00:17.914, 97Mb) Sushi: info Converted 2 FHIR instances. (00:00.073 / 00:17.987, 97Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.000 / 00:17.988, 97Mb) Sushi: info Exported 2 FHIR resources as JSON. (00:00.001 / 00:17.989, 97Mb) Sushi: info Exporting FSH definitions only. No IG related content will be exported. (00:00.001 / 00:17.991, 97Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 00:17.993, 97Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:17.993, 97Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:17.993, 97Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:17.993, 97Mb) Sushi: | | 0 | 0 | 0 | 0 | | (00:00.000 / 00:17.994, 97Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:17.994, 97Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:17.994, 97Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:17.994, 97Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:17.995, 97Mb) Sushi: | | 0 | 0 | 2 | | (00:00.000 / 00:17.995, 97Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:17.995, 97Mb) Sushi: | | (00:00.000 / 00:17.995, 97Mb) Sushi: =================================================================== (00:00.000 / 00:17.996, 97Mb) Sushi: | Tank you very much! 0 Errors 0 Warnings | (00:00.000 / 00:17.996, 97Mb) Sushi: =================================================================== (00:00.000 / 00:17.996, 97Mb) Unable to load IG as an r5 IG - try R4 (Unknown Content foo @ START_TAG seen ...\n ... @51:14) (00:01.348 / 00:19.345, 70Mb) Publishing Content Failed: Error Parsing File /scratch/repo/input/ch.fhir.ig.ch-ig.xml: Unknown Content foo @ START_TAG seen ...\n ... @51:14 (00:00.002 / 00:19.347, 70Mb) (00:00.000 / 00:19.348, 70Mb) Use -? to get command line help (00:00.000 / 00:19.348, 70Mb) (00:00.000 / 00:19.348, 70Mb) Stack Dump (for debugging): (00:00.000 / 00:19.348, 70Mb) java.lang.Exception: Error Parsing File /scratch/repo/input/ch.fhir.ig.ch-ig.xml: Unknown Content foo @ START_TAG seen ...\n ... @51:14 at org.hl7.fhir.igtools.publisher.Publisher.initializeFromIg(Publisher.java:2720) at org.hl7.fhir.igtools.publisher.Publisher.initialize(Publisher.java:2581) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:1012) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:13036) Caused by: org.hl7.fhir.exceptions.FHIRFormatError: Unknown Content foo @ START_TAG seen ...\n ... @51:14 at org.hl7.fhir.r4.formats.XmlParserBase.unknownContent(XmlParserBase.java:329) at org.hl7.fhir.r4.formats.XmlParser.parseImplementationGuideImplementationGuideDefinitionComponent(XmlParser.java:12925) at org.hl7.fhir.r4.formats.XmlParser.parseImplementationGuideContent(XmlParser.java:12851) at org.hl7.fhir.r4.formats.XmlParser.parseImplementationGuide(XmlParser.java:12800) at org.hl7.fhir.r4.formats.XmlParser.parseResource(XmlParser.java:25933) at org.hl7.fhir.r4.formats.XmlParserBase.parse(XmlParserBase.java:158) at org.hl7.fhir.r4.formats.XmlParserBase.parse(XmlParserBase.java:141) at org.hl7.fhir.r4.formats.ParserBase.parse(ParserBase.java:58) at org.hl7.fhir.r4.formats.FormatUtilities.loadFile(FormatUtilities.java:182) at org.hl7.fhir.igtools.publisher.Publisher.initializeFromIg(Publisher.java:2717) ... 3 more