INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/oijauregui/ehdsimaging --branch R4 repo DEBUG:root:Time to deadline 35879.997454 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35846.107391 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35844.887272 seconds npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported added 140 packages in 5s 15 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.6.0 npm notice Changelog: npm notice Run `npm install -g npm@11.6.0` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/oijauregui/ehdsimaging/ -out /scratch/repo DEBUG:root:Time to deadline 35839.595898 seconds FHIR IG Publisher Version 2.0.16 (Git# b88a2ed37ef7). Built 2025-08-27T17:19:52.105Z (11 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/oijauregui/ehdsimaging/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Monday, September 8, 2025, 9:17:56 AM Coordinated Universal Time (2025-09-08T09:17:56Z) Build FHIR IG from /scratch/repo (00:00.022 / 00:00.023, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.025, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.002 / 00:00.028, 97Mb) Found dependency on hl7.terminology.r5#6.3.0 in Sushi config. Pre-installing (00:00.005 / 00:00.033, 97Mb) Installing hl7.terminology.r5#6.3.0 to the package cache  Fetching:  Installing hl7.terminology.r5#6.3.0  done. Found dependency on hl7.fhir.uv.extensions#5.3.0-ballot in Sushi config. Pre-installing (00:02.793 / 00:02.827, 220Mb) Installing hl7.fhir.uv.extensions#5.3.0-ballot to the package cache  Fetching:  Installing hl7.fhir.uv.extensions#5.3.0-ballot  done. Found dependency on hl7.fhir.uv.ips#1.1.0 in Sushi config. Pre-installing (00:00.972 / 00:03.800, 268Mb) Installing hl7.fhir.uv.ips#1.1.0 to the package cache  Fetching:  Installing hl7.fhir.uv.ips#1.1.0  done. Found dependency on hl7.fhir.eu.extensions#0.1.1-ballot in Sushi config. Pre-installing (00:01.583 / 00:05.383, 300Mb) Installing hl7.fhir.eu.extensions#0.1.1-ballot to the package cache  Fetching:  Installing hl7.fhir.eu.extensions#0.1.1-ballot  done. Found dependency on hl7.fhir.eu.base-r5#0.1.0-ballot in Sushi config. Pre-installing (00:00.260 / 00:05.644, 300Mb) Installing hl7.fhir.eu.base-r5#0.1.0-ballot to the package cache  Fetching:  Installing hl7.fhir.eu.base-r5#0.1.0-ballot  done. Run Sushi on /scratch/repo (00:00.390 / 00:06.034, 300Mb) Sushi: info Running SUSHI v3.16.3 (implements FHIR Shorthand specification v3.0.0) (00:00.585 / 00:06.619, 316Mb) Sushi: info Arguments: (00:00.000 / 00:06.619, 316Mb) Sushi: info --require-latest (00:00.000 / 00:06.619, 316Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:06.619, 316Mb) Sushi: info /scratch/repo (00:00.000 / 00:06.620, 316Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.842 / 00:07.463, 316Mb) Sushi: info Importing FSH text... (00:00.124 / 00:07.587, 316Mb) Sushi: info Preprocessed 82 documents with 157 aliases. (00:00.512 / 00:08.099, 316Mb) Sushi: info Imported 98 definitions and 23 instances. (00:00.496 / 00:08.596, 316Mb) Sushi: info Resolved hl7.fhir.uv.tools.r5#latest to concrete version 0.8.0 (00:00.660 / 00:09.256, 316Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r5#0.8.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r5/0.8.0 (00:00.001 / 00:09.257, 316Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r5#0.8.0 (00:00.910 / 00:10.168, 316Mb) Sushi: info Cached hl7.fhir.uv.tools.r5#0.8.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r5#0.8.0 (00:00.003 / 00:10.171, 316Mb) Sushi: info Loaded hl7.fhir.uv.tools.r5#0.8.0 with 107 resources (00:00.064 / 00:10.235, 316Mb) Sushi: info Loaded hl7.terminology.r5#6.3.0 with 4374 resources (00:01.391 / 00:11.628, 316Mb) Sushi: info Loaded hl7.fhir.uv.extensions#5.3.0-ballot with 823 resources (00:00.300 / 00:11.927, 316Mb) Sushi: info Loaded hl7.fhir.uv.ips#1.1.0 with 104 resources (00:00.089 / 00:12.016, 316Mb) Sushi: info Loaded hl7.fhir.eu.extensions#0.1.1-ballot with 7 resources (00:00.003 / 00:12.020, 316Mb) Sushi: info Loaded hl7.fhir.eu.base-r5#0.1.0-ballot with 22 resources (00:00.010 / 00:12.030, 316Mb) Sushi: info Attempting to download hl7.fhir.r5.core#5.0.0 from https://packages.fhir.org/hl7.fhir.r5.core/5.0.0 (00:00.000 / 00:12.031, 316Mb) Sushi: info Downloaded hl7.fhir.r5.core#5.0.0 (00:03.956 / 00:15.987, 316Mb) Sushi: info Cached hl7.fhir.r5.core#5.0.0 to /home/fhiruser/.fhir/packages/hl7.fhir.r5.core#5.0.0 (00:00.002 / 00:15.990, 316Mb) Sushi: info Loaded hl7.fhir.r5.core#5.0.0 with 2968 resources (00:00.987 / 00:16.977, 316Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 59 resources (00:00.027 / 00:17.005, 316Mb) Sushi: info Converting FSH to FHIR resources... (00:00.017 / 00:17.023, 316Mb) Sushi: error Parent AdverseEvent` not found for ImAdverseEvent (00:19.545 / 00:36.568, 316Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-adverseevent.fsh (00:00.000 / 00:36.568, 316Mb) Sushi: Line: 23 - 42 (00:00.000 / 00:36.569, 316Mb) Sushi: error Parent AdverseEvent` not found for ImAdverseEvent (00:10.365 / 00:46.934, 316Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-adverseevent.fsh (00:00.000 / 00:46.934, 316Mb) Sushi: Line: 23 - 42 (00:00.000 / 00:46.934, 316Mb) Sushi: info Converted 82 FHIR StructureDefinitions. (00:04.005 / 00:50.940, 316Mb) Sushi: info Converted 4 FHIR CodeSystems. (00:00.124 / 00:51.065, 316Mb) Sushi: info Converted 12 FHIR ValueSets. (00:00.307 / 00:51.373, 316Mb) Sushi: info Converted 23 FHIR instances. (00:02.854 / 00:54.227, 316Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.013 / 00:54.240, 316Mb) Sushi: info Exported 109 FHIR resources as JSON. (00:00.407 / 00:54.648, 316Mb) Sushi: info Assembling Implementation Guide sources... (00:00.003 / 00:54.651, 316Mb) Sushi: info Generated ImplementationGuide-hl7.fhir.eu.imaging-r5.json (00:00.078 / 00:54.729, 316Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:54.730, 316Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 00:54.731, 316Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:54.732, 316Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:54.732, 316Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:54.732, 316Mb) Sushi: | | 74 | 6 | 0 | 0 | | (00:00.000 / 00:54.732, 316Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:54.732, 316Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:54.732, 316Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:54.732, 316Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:54.733, 316Mb) Sushi: | | 12 | 4 | 23 | | (00:00.000 / 00:54.733, 316Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:54.733, 316Mb) Sushi: | | (00:00.000 / 00:54.733, 316Mb) Sushi: =================================================================== (00:00.000 / 00:54.733, 316Mb) Sushi: | Looks like you're floundering 2 Errors 0 Warnings | (00:00.000 / 00:54.733, 316Mb) Sushi: =================================================================== (00:00.000 / 00:54.733, 316Mb) Sushi couldn't be run. Complete output from running Sushi : (00:00.048 / 00:54.782, 316Mb) Note: Check that Sushi is installed correctly ("npm install -g fsh-sushi". On windows, get npm from https://www.npmjs.com/get-npm) (00:00.000 / 00:54.782, 316Mb) Exception: Process exited with an error: 2 (Exit value: 2) (00:00.000 / 00:54.782, 316Mb) Publishing Content Failed: Process exited with an error: 2 (Exit value: 2) (00:00.000 / 00:54.782, 316Mb) (00:00.000 / 00:54.783, 316Mb) Use -? to get command line help (00:00.000 / 00:54.783, 316Mb) (00:00.000 / 00:54.783, 316Mb) Stack Dump (for debugging): (00:00.000 / 00:54.783, 316Mb) org.apache.commons.exec.ExecuteException: Process exited with an error: 2 (Exit value: 2) at org.apache.commons.exec.DefaultExecutor.executeInternal(DefaultExecutor.java:404) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:166) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:153) at org.hl7.fhir.igtools.publisher.FSHRunner.runFsh(FSHRunner.java:89) at org.hl7.fhir.igtools.publisher.PublisherIGLoader.initialize(PublisherIGLoader.java:130) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:207) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:1481)