INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/medcomdk/dk-medcom-notes --branch githubpages repo DEBUG:root:Time to deadline 35879.997948 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.580945 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35878.562247 seconds npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported added 139 packages in 7s 14 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.7.0 npm notice Changelog: npm notice Run `npm install -g npm@11.7.0` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/medcomdk/dk-medcom-notes/ -out /scratch/repo DEBUG:root:Time to deadline 35870.806715 seconds FHIR IG Publisher Version 2.0.28 (Git# 6c0c59a855ec). Built 2025-12-08T04:22:21.813Z (7 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/medcomdk/dk-medcom-notes/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Monday, December 15, 2025, 11:59:40 AM Coordinated Universal Time (2025-12-15T11:59:40Z) Build FHIR IG from /scratch/repo (00:00.027 / 00:00.027, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.003 / 00:00.030, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.004 / 00:00.035, 97Mb) Found dependency on hl7.fhir.us.core#3.4.0 in Sushi config. Pre-installing (00:00.008 / 00:00.043, 97Mb) Installing hl7.fhir.us.core#3.4.0 to the package cache  Fetching: Unable to install hl7.fhir.us.core#3.4.0: Unable to find package hl7.fhir.us.core#3.4.0 (00:02.213 / 00:02.256, 81Mb) Trying to go on (00:00.000 / 00:02.257, 81Mb) Run Sushi on /scratch/repo (00:00.001 / 00:02.259, 81Mb) Sushi: info Running SUSHI v3.16.5 (implements FHIR Shorthand specification v3.0.0) (00:01.020 / 00:03.279, 89Mb) Sushi: info Arguments: (00:00.000 / 00:03.279, 89Mb) Sushi: info --require-latest (00:00.000 / 00:03.280, 89Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:03.280, 89Mb) Sushi: info /scratch/repo (00:00.000 / 00:03.280, 89Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.696 / 00:03.977, 89Mb) Sushi: info Importing FSH text... (00:00.167 / 00:04.144, 89Mb) Sushi: info Preprocessed 1 documents with 0 aliases. (00:00.060 / 00:04.205, 89Mb) Sushi: info Imported 1 definitions and 1 instances. (00:00.005 / 00:04.211, 89Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.162 / 00:04.373, 89Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.8.0 (00:00.657 / 00:05.031, 89Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.8.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.8.0 (00:00.001 / 00:05.032, 89Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.8.0 (00:00.874 / 00:05.907, 97Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.8.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.8.0 (00:00.002 / 00:05.910, 97Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.8.0 with 110 resources (00:00.087 / 00:05.998, 97Mb) Sushi: info Resolved hl7.terminology.r4#latest to concrete version 7.0.1 (00:00.467 / 00:06.465, 97Mb) Sushi: info Attempting to download hl7.terminology.r4#7.0.1 from https://packages.fhir.org/hl7.terminology.r4/7.0.1 (00:00.000 / 00:06.466, 97Mb) Sushi: info Downloaded hl7.terminology.r4#7.0.1 (00:02.833 / 00:09.299, 97Mb) Sushi: info Cached hl7.terminology.r4#7.0.1 to /home/fhiruser/.fhir/packages/hl7.terminology.r4#7.0.1 (00:00.001 / 00:09.301, 97Mb) Sushi: info Loaded hl7.terminology.r4#7.0.1 with 4096 resources (00:01.687 / 00:10.988, 97Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r4#latest to concrete version 5.2.0 (00:00.486 / 00:11.475, 97Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 00:11.475, 97Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.602 / 00:13.077, 97Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.001 / 00:13.079, 97Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.337 / 00:13.416, 97Mb) Sushi: info Attempting to download hl7.fhir.us.core#3.4.0 from https://packages.fhir.org/hl7.fhir.us.core/3.4.0 (00:00.000 / 00:13.417, 97Mb) Sushi: info Attempting to download hl7.fhir.us.core#3.4.0 from https://packages2.fhir.org/packages/hl7.fhir.us.core/3.4.0 (00:00.441 / 00:13.859, 97Mb) Sushi: error Failed to load hl7.fhir.us.core#3.4.0: Failed to download hl7.fhir.us.core#3.4.0 from the registry (00:00.254 / 00:14.114, 97Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:14.114, 97Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:03.338 / 00:17.453, 97Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.001 / 00:17.454, 97Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.702 / 00:19.157, 97Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.012 / 00:19.169, 97Mb) Sushi: info Converting FSH to FHIR resources... (00:00.024 / 00:19.194, 97Mb) Sushi: info Converted 1 FHIR StructureDefinitions. (00:00.063 / 00:19.258, 97Mb) Sushi: info Converted 1 FHIR instances. (00:00.098 / 00:19.356, 97Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.000 / 00:19.357, 97Mb) Sushi: info Exported 2 FHIR resources as JSON. (00:00.009 / 00:19.367, 97Mb) Sushi: info Assembling Implementation Guide sources... (00:00.001 / 00:19.368, 97Mb) Sushi: info Generated ImplementationGuide-medcom.fhir.dk.notes.json (00:00.046 / 00:19.415, 97Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:19.416, 97Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.002 / 00:19.418, 97Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:19.419, 97Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:19.419, 97Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:19.419, 97Mb) Sushi: | | 1 | 0 | 0 | 0 | | (00:00.000 / 00:19.420, 97Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:19.420, 97Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:19.420, 97Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:19.420, 97Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:19.421, 97Mb) Sushi: | | 0 | 0 | 1 | | (00:00.000 / 00:19.421, 97Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:19.421, 97Mb) Sushi: | | (00:00.000 / 00:19.421, 97Mb) Sushi: =================================================================== (00:00.000 / 00:19.421, 97Mb) Sushi: | Don't clam up, ask for help. 1 Error 0 Warnings | (00:00.000 / 00:19.422, 97Mb) Sushi: =================================================================== (00:00.000 / 00:19.422, 97Mb) Sushi couldn't be run. Complete output from running Sushi : (00:00.019 / 00:19.441, 97Mb) Note: Check that Sushi is installed correctly ("npm install -g fsh-sushi". On windows, get npm from https://www.npmjs.com/get-npm) (00:00.000 / 00:19.442, 97Mb) Exception: Process exited with an error: 1 (Exit value: 1) (00:00.000 / 00:19.442, 97Mb) Publishing Content Failed: Process exited with an error: 1 (Exit value: 1) (00:00.000 / 00:19.443, 97Mb) (00:00.000 / 00:19.443, 97Mb) Use -? to get command line help (00:00.000 / 00:19.443, 97Mb) (00:00.000 / 00:19.443, 97Mb) Stack Dump (for debugging): (00:00.000 / 00:19.443, 97Mb) org.apache.commons.exec.ExecuteException: Process exited with an error: 1 (Exit value: 1) at org.apache.commons.exec.DefaultExecutor.executeInternal(DefaultExecutor.java:404) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:166) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:153) at org.hl7.fhir.igtools.publisher.FSHRunner.runFsh(FSHRunner.java:89) at org.hl7.fhir.igtools.publisher.PublisherIGLoader.initialize(PublisherIGLoader.java:143) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:222) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:1594)