INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/medcomdk/dk-medcom-conditionlist --branch GitHubPagesMaster repo DEBUG:root:Time to deadline 35879.997903 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.430202 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35878.361244 seconds npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported added 139 packages in 7s 14 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.8.0 npm notice Changelog: npm notice Run `npm install -g npm@11.8.0` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/medcomdk/dk-medcom-conditionlist/ -out /scratch/repo DEBUG:root:Time to deadline 35871.009013 seconds FHIR IG Publisher Version 2.0.30 (Git# 04ebe87f19c1). Built 2026-01-20T18:29:40.591Z (5 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/medcomdk/dk-medcom-conditionlist/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Monday, January 26, 2026, 6:15:29 AM Coordinated Universal Time (2026-01-26T06:15:29Z) Build FHIR IG from /scratch/repo (00:00.026 / 00:00.027, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.003 / 00:00.030, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.003 / 00:00.033, 97Mb) Found dependency on medcom.fhir.dk.core#2.3.0 in Sushi config. Pre-installing (00:00.009 / 00:00.043, 97Mb) Installing medcom.fhir.dk.core#2.3.0 to the package cache  Fetching:  Installing medcom.fhir.dk.core#2.3.0  done. Found dependency on medcom.fhir.dk.document#dev in Sushi config. Pre-installing (00:03.666 / 00:03.709, 56Mb) Unable to check package currency: medcom.fhir.dk.document: medcom.fhir.dk.document Installing medcom.fhir.dk.document#current to the package cache  Fetching:  Installing medcom.fhir.dk.document#current  done. Found dependency on hl7.fhir.dk.core#3.1.0 in Sushi config. Pre-installing (00:00.891 / 00:04.600, 112Mb) Installing hl7.fhir.dk.core#3.1.0 to the package cache  Fetching:  Installing hl7.fhir.dk.core#3.1.0  done. Run Sushi on /scratch/repo (00:01.346 / 00:05.946, 128Mb) Sushi: info Running SUSHI v3.17.0 (implements FHIR Shorthand specification v3.0.0) (00:00.731 / 00:06.678, 136Mb) Sushi: info Arguments: (00:00.000 / 00:06.679, 136Mb) Sushi: info --require-latest (00:00.000 / 00:06.679, 136Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:06.679, 136Mb) Sushi: info /scratch/repo (00:00.000 / 00:06.679, 136Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.753 / 00:07.433, 136Mb) Sushi: info Importing FSH text... (00:00.147 / 00:07.580, 136Mb) Sushi: info Preprocessed 7 documents with 30 aliases. (00:00.171 / 00:07.751, 136Mb) Sushi: info Imported 3 definitions and 8 instances. (00:00.016 / 00:07.768, 136Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.148 / 00:07.916, 136Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.9.0 (00:00.676 / 00:08.593, 136Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.9.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.9.0 (00:00.001 / 00:08.594, 136Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.9.0 (00:00.836 / 00:09.431, 136Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.9.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.9.0 (00:00.002 / 00:09.433, 136Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.9.0 with 117 resources (00:00.085 / 00:09.519, 136Mb) Sushi: info Resolved hl7.terminology.r4#latest to concrete version 7.0.1 (00:00.477 / 00:09.997, 136Mb) Sushi: info Attempting to download hl7.terminology.r4#7.0.1 from https://packages.fhir.org/hl7.terminology.r4/7.0.1 (00:00.000 / 00:09.997, 136Mb) Sushi: info Downloaded hl7.terminology.r4#7.0.1 (00:02.867 / 00:12.865, 144Mb) Sushi: info Cached hl7.terminology.r4#7.0.1 to /home/fhiruser/.fhir/packages/hl7.terminology.r4#7.0.1 (00:00.001 / 00:12.866, 144Mb) Sushi: info Loaded hl7.terminology.r4#7.0.1 with 4096 resources (00:01.631 / 00:14.497, 144Mb) Sushi: info Loaded medcom.fhir.dk.core#2.3.0 with 19 resources (00:00.018 / 00:14.516, 144Mb) Sushi: info Falling back to medcom.fhir.dk.document#current since medcom.fhir.dk.document#dev is not locally cached. To avoid this, add medcom.fhir.dk.document#dev to your local FHIR cache by building it locally with the HL7 FHIR IG Publisher. (00:00.000 / 00:14.516, 144Mb) Sushi: info Loaded medcom.fhir.dk.document#current with 25 resources (00:00.088 / 00:14.604, 144Mb) Sushi: info Loaded hl7.fhir.dk.core#3.1.0 with 48 resources (00:00.031 / 00:14.636, 144Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:14.636, 144Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:03.353 / 00:17.989, 144Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.001 / 00:17.991, 144Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.643 / 00:19.634, 144Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r4#latest to concrete version 5.2.0 (00:00.521 / 00:20.156, 144Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 00:20.156, 144Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.517 / 00:21.674, 144Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.001 / 00:21.675, 144Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.313 / 00:21.989, 144Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.015 / 00:22.005, 144Mb) Sushi: info Converting FSH to FHIR resources... (00:00.023 / 00:22.028, 144Mb) Sushi: info Converted 3 FHIR StructureDefinitions. (00:00.422 / 00:22.450, 144Mb) Sushi: error Element Composition.language has minimum cardinality 1 but occurs 0 time(s). (00:00.099 / 00:22.550, 144Mb) Sushi: File: /scratch/repo/input/fsh/Composition.fsh (00:00.000 / 00:22.551, 144Mb) Sushi: Line: 12 - 43 (00:00.000 / 00:22.551, 144Mb) Sushi: error Element Composition.text has minimum cardinality 1 but occurs 0 time(s). (00:00.000 / 00:22.551, 144Mb) Sushi: File: /scratch/repo/input/fsh/Composition.fsh (00:00.000 / 00:22.551, 144Mb) Sushi: Line: 12 - 43 (00:00.000 / 00:22.552, 144Mb) Sushi: error Element Composition.identifier has minimum cardinality 1 but occurs 0 time(s). (00:00.004 / 00:22.557, 144Mb) Sushi: File: /scratch/repo/input/fsh/Composition.fsh (00:00.000 / 00:22.557, 144Mb) Sushi: Line: 12 - 43 (00:00.000 / 00:22.557, 144Mb) Sushi: error Element Composition.confidentiality has minimum cardinality 1 but occurs 0 time(s). (00:00.025 / 00:22.583, 144Mb) Sushi: File: /scratch/repo/input/fsh/Composition.fsh (00:00.000 / 00:22.583, 144Mb) Sushi: Line: 12 - 43 (00:00.000 / 00:22.584, 144Mb) Sushi: error Element Composition.event has minimum cardinality 1 but occurs 0 time(s). (00:00.002 / 00:22.587, 144Mb) Sushi: File: /scratch/repo/input/fsh/Composition.fsh (00:00.000 / 00:22.587, 144Mb) Sushi: Line: 12 - 43 (00:00.000 / 00:22.587, 144Mb) Sushi: error InstanceOf MedComDocumentReference not found for 94e65db8-2f0c-4a2c-a7c9-06a160d59a12 (00:00.123 / 00:22.710, 144Mb) Sushi: File: /scratch/repo/input/fsh/DocumentReferenct.fsh (00:00.000 / 00:22.711, 144Mb) Sushi: Line: 2 - 30 (00:00.000 / 00:22.711, 144Mb) Sushi: error InstanceOf MedComDocumentAuthorPerson not found for 1fcad31f-8967-4f49-b6af-7e64082e8fec (00:00.120 / 00:22.832, 144Mb) Sushi: File: /scratch/repo/input/fsh/instances.fsh (00:00.000 / 00:22.832, 144Mb) Sushi: Line: 1 - 9 (00:00.000 / 00:22.832, 144Mb) Sushi: error InstanceOf MedComDocumentSourcePatient not found for 69e475df-20c8-4f54-8cea-9843568205fd (00:00.000 / 00:22.833, 144Mb) Sushi: File: /scratch/repo/input/fsh/instances.fsh (00:00.000 / 00:22.833, 144Mb) Sushi: Line: 11 - 22 (00:00.000 / 00:22.834, 144Mb) Sushi: error InstanceOf MedComDocumentAuthorOrganization not found for 97d47a38-5189-4012-a3c6-cc57e102f9f5 (00:00.000 / 00:22.834, 144Mb) Sushi: File: /scratch/repo/input/fsh/instances.fsh (00:00.000 / 00:22.834, 144Mb) Sushi: Line: 24 - 30 (00:00.000 / 00:22.835, 144Mb) Sushi: info Converted 8 FHIR instances. (00:00.000 / 00:22.835, 144Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.000 / 00:22.835, 144Mb) Sushi: info Exported 7 FHIR resources as JSON. (00:00.035 / 00:22.871, 144Mb) Sushi: info Assembling Implementation Guide sources... (00:00.001 / 00:22.873, 144Mb) Sushi: info Generated ImplementationGuide-medcom.fhir.dk.shareddiagnoses.json (00:00.046 / 00:22.920, 144Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:22.920, 144Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 00:22.921, 144Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:22.922, 144Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:22.922, 144Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:22.922, 144Mb) Sushi: | | 3 | 0 | 0 | 0 | | (00:00.000 / 00:22.922, 144Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:22.922, 144Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:22.922, 144Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:22.922, 144Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:22.923, 144Mb) Sushi: | | 0 | 0 | 4 | | (00:00.000 / 00:22.923, 144Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:22.923, 144Mb) Sushi: | | (00:00.000 / 00:22.923, 144Mb) Sushi: =================================================================== (00:00.000 / 00:22.923, 144Mb) Sushi: | Don't be shell-shocked. 9 Errors 0 Warnings | (00:00.000 / 00:22.923, 144Mb) Sushi: =================================================================== (00:00.000 / 00:22.924, 144Mb) Sushi couldn't be run. Complete output from running Sushi : (00:00.018 / 00:22.942, 144Mb) Note: Check that Sushi is installed correctly ("npm install -g fsh-sushi". On windows, get npm from https://www.npmjs.com/get-npm) (00:00.000 / 00:22.942, 144Mb) Exception: Process exited with an error: 9 (Exit value: 9) (00:00.000 / 00:22.943, 144Mb) Publishing Content Failed: Process exited with an error: 9 (Exit value: 9) (00:00.000 / 00:22.943, 144Mb) (00:00.000 / 00:22.943, 144Mb) Use -? to get command line help (00:00.000 / 00:22.943, 144Mb) (00:00.000 / 00:22.943, 144Mb) Stack Dump (for debugging): (00:00.000 / 00:22.943, 144Mb) org.apache.commons.exec.ExecuteException: Process exited with an error: 9 (Exit value: 9) at org.apache.commons.exec.DefaultExecutor.executeInternal(DefaultExecutor.java:404) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:166) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:153) at org.hl7.fhir.igtools.publisher.FSHRunner.runFsh(FSHRunner.java:89) at org.hl7.fhir.igtools.publisher.PublisherIGLoader.initialize(PublisherIGLoader.java:143) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:222) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:1594)