Botswana FHIR Implementation Guide - Laboratory
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Botswana FHIR Implementation Guide - Laboratory, published by Jembi Health Systems. This guide is not an authorized publication; it is the continuous build for version 1.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/jembi/bw-laboratory-workflows-ig/ and changes regularly. See the Directory of published versions

Resource Profile: PimsUATSpecimen - Mappings

Active as of 2024-08-28

Mappings for the uat-pims-specimen resource profile.

Mappings for RIM Mapping (http://hl7.org/v3)

PimsUATSpecimen
SpecimenEntity. Role, or Act, Role[classCode=SPEC]
   textAct.text?
   containedN/A
   extensionN/A
   modifierExtensionN/A
   identifier.id
   identifier (USID).id
      idn/a
      extensionn/a
      useRole.code or implied by context
      typeRole.code or implied by context
      systemII.root or Role.id.root
      valueII.extension or II.root if system indicates OID or GUID (Or Role.id.extension or root)
      periodRole.effectiveTime or implied by context
      assignerII.assigningAuthorityName but note that this is an improper use by the definition of the field. Also Role.scoper
   accessionIdentifier.participation[typeCode=SBJ].act[classCode=ACSN, moodCode=EVN].id
   statusstatus
   type.code
   subject.scoper or .scoper.playsRole
   receivedTime.participation[typeCode=SBJ].act[code=SPCREC, moodCode=EVN].effectiveTime
   parent.scoper (if parent) .player.scopesRole[classCode=SPEC].player (if child)
   requestoutboundRelationship[typeCode=FLFS].target
   collection.participation[typeCode=SBJ].act[classCode=SPECCOLLECT, moodCode=EVN]
      idn/a
      extensionn/a
      modifierExtensionN/A
      collector.participation[typeCode=PFM].role
      collected[x].effectiveTime
      quantity.participation[typeCode=SBJ].role[classCode=SPEC].player.quantity
      method.methodCode
      bodySite.targetSiteCode
   processing.participation[typeCode=SBJ].act[code=SPCTRT, moodCode=EVN]
      idn/a
      extensionn/a
      modifierExtensionN/A
      description.text
      procedure.code
      additive.participation[typeCode=CSM].role[classCode=ADTV].code
      time[x].effectiveTime
   container.player.scopingRole[classCode=CONT].scoper
      idn/a
      extensionn/a
      modifierExtensionN/A
      identifier.id
      description.desc
      type.code
      capacity.quantity
      specimenQuantity.playedRole[classCode=CONT].quantity
      additive[x].scopesRole[classCode=ADTV].player
   note.inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code="annotation"].value

Mappings for FiveWs Pattern Mapping (http://hl7.org/fhir/fivews)

PimsUATSpecimen
Specimen
   identifierFiveWs.identifier
   identifier (USID)FiveWs.identifier
   accessionIdentifierFiveWs.identifier
   statusFiveWs.status
   typeFiveWs.what[x]
   subjectFiveWs.subject[x], FiveWs.subject
   receivedTimeFiveWs.done[x]
   requestFiveWs.why[x]
   collection
      collectorFiveWs.actor
      collected[x]FiveWs.init
      durationFiveWs.init

Mappings for HL7 v2 Mapping (http://hl7.org/v2)

PimsUATSpecimen
Specimen
   identifierSPM-2
   identifier (USID)SPM-2
      useN/A
      typeCX.5
      systemCX.4 / EI-2-4
      valueCX.1 / EI.1
      periodCX.7 + CX.8
      assignerCX.4 / (CX.4,CX.9,CX.10)
   accessionIdentifierSPM-30 (v2.7+)
   statusSPM-20
   typeSPM-4 and possibly SPM-5
   receivedTimeSPM-18
   requestORC? OBR-2/3?
   collectionSPM-14
      collectorPRT
      collected[x]SPM-17
      quantitySPM-12
      methodSPM-7
      bodySiteSPM-8 and SPM-9
      fastingStatus[x]OBR-
   processing
      additiveSPM-6
   container
      identifierSAC-3
      typeSPM-27
      capacityone of: SAC 16, SAC17 and SAC 20, or SAC 21 and SAC 20
      specimenQuantitySAC-23 (value) SAC-24 (units
      additive[x]SAC-27
   conditionSPM-24
   noteOBX