@prefix fhir: . @prefix owl: . @prefix rdfs: . @prefix xsd: . # - resource ------------------------------------------------------------------- a fhir:ConceptMap ; fhir:nodeRole fhir:treeRoot ; fhir:Resource.id [ fhir:value "dm-instrumental-investigation-to-omop"] ; fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ] ; fhir:Narrative.div "

Generated Narrative: ConceptMap dm-instrumental-investigation-to-omop

This mapping does not specify any particular context of use.


Mapping from PROTECT-CHILD Data Model Variables to OHDSI Standardized Vocabularies

Source Concept DetailsRelationshipTarget Concept DetailsComment
Codes from PROTECT-CHILD Data Model VariablesCodes from OHDSI Standardized Vocabularies
instrumental_investigation.instrumental_investigationinstrumental_investigation.instrumental_investigationnarrower4061009CT of abdomenOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4083230MRI of abdomenOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4299523AngiographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4303663CT angiography with contrastOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower37311324MRI of brainOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4329502SPECT of kidney using dimercaptosuccinic acidOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower37152490Doppler ultrasonographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4346528Renal isotope studiesOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4230911EchocardiographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4163951Electrocardiographic procedureOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4181917ElectroencephalogramOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4217034Kidney biopsyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4167052Doppler ultrasonography of kidneyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4147846Echography of kidneyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4314001Biopsy of liverOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4160708Doppler ultrasonography of liver and portal systemOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4346948Tc99m-MAG3 renogramOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4194588Magnetic resonance cholangiopancreatographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4168020Fluoroscopic micturating cystourethrographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4305790Positron emission tomographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4060500CAT scan - whole bodyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower4037672UltrasonographyOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
narrower40479203Ultrasound elastography of liverOMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED.
instrumental_investigation.resultinstrumental_investigation.resultnarrower4085245No abnormality detectedOMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED.
narrower40484102Abnormal finding on evaluation procedureOMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED.
" ] ; fhir:ConceptMap.url [ fhir:value "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/ConceptMap/dm-instrumental-investigation-to-omop"] ; fhir:ConceptMap.version [ fhir:value "0.1.0-ci-build"] ; fhir:ConceptMap.name [ fhir:value "DmInstrumentalInvestigationToOmop"] ; fhir:ConceptMap.title [ fhir:value "DM instrumental_investigation → OMOP"] ; fhir:ConceptMap.status [ fhir:value "draft"] ; fhir:ConceptMap.experimental [ fhir:value "false"^^xsd:boolean] ; fhir:ConceptMap.date [ fhir:value "2026-09-28T06:51:47+00:00"^^xsd:dateTime] ; fhir:ConceptMap.publisher [ fhir:value "Protect Child"] ; fhir:ConceptMap.contact [ fhir:index 0 ; fhir:ContactDetail.name [ fhir:value "Protect Child" ] ; fhir:ContactDetail.telecom [ fhir:index 0 ; fhir:ContactPoint.system [ fhir:value "url" ] ; fhir:ContactPoint.value [ fhir:value "https://protect-child.eu/" ] ] ] ; fhir:ConceptMap.description [ fhir:value "The OMOP concepts for each column of the DMv1.2 instrumental_investigation table, from the DM → FHIR → OMOP crosswalk. Each target's comment names the OMOP CDM field it fills. `equivalent`: the column's own concept; `narrower`: one of several concepts the column's values map to; `relatedto`: a value, unit or qualifier concept. Concept IDs of 2000000000 and above are PROTECT-CHILD custom concepts (CodeSystem ProtectChildOmopVocabulary)."] ; fhir:ConceptMap.group [ fhir:index 0 ; fhir:ConceptMap.group.source [ fhir:value "https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/dm-variable-cs" ] ; fhir:ConceptMap.group.target [ fhir:value "https://fhir-terminology.ohdsi.org" ] ; fhir:ConceptMap.group.element [ fhir:index 0 ; fhir:ConceptMap.group.element.code [ fhir:value "instrumental_investigation.instrumental_investigation" ] ; fhir:ConceptMap.group.element.target [ fhir:index 0 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4061009" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "CT of abdomen" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 1 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4083230" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "MRI of abdomen" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 2 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4299523" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Angiography" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 3 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4303663" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "CT angiography with contrast" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 4 ; fhir:ConceptMap.group.element.target.code [ fhir:value "37311324" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "MRI of brain" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 5 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4329502" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "SPECT of kidney using dimercaptosuccinic acid" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 6 ; fhir:ConceptMap.group.element.target.code [ fhir:value "37152490" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Doppler ultrasonography" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 7 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4346528" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Renal isotope studies" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 8 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4230911" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Echocardiography" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 9 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4163951" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Electrocardiographic procedure" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 10 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4181917" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Electroencephalogram" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 11 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4217034" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Kidney biopsy" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 12 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4167052" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Doppler ultrasonography of kidney" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 13 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4147846" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Echography of kidney" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 14 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4314001" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Biopsy of liver" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 15 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4160708" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Doppler ultrasonography of liver and portal system" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 16 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4346948" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Tc99m-MAG3 renogram" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 17 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4194588" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Magnetic resonance cholangiopancreatography" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 18 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4168020" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Fluoroscopic micturating cystourethrography" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 19 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4305790" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Positron emission tomography" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 20 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4060500" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "CAT scan - whole body" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 21 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4037672" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Ultrasonography" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ], [ fhir:index 22 ; fhir:ConceptMap.group.element.target.code [ fhir:value "40479203" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Ultrasound elastography of liver" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP PROCEDURE_OCCURRENCE.procedure_concept_id; vocabulary SNOMED." ] ] ], [ fhir:index 1 ; fhir:ConceptMap.group.element.code [ fhir:value "instrumental_investigation.result" ] ; fhir:ConceptMap.group.element.target [ fhir:index 0 ; fhir:ConceptMap.group.element.target.code [ fhir:value "4085245" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "No abnormality detected" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED." ] ], [ fhir:index 1 ; fhir:ConceptMap.group.element.target.code [ fhir:value "40484102" ] ; fhir:ConceptMap.group.element.target.display [ fhir:value "Abnormal finding on evaluation procedure" ] ; fhir:ConceptMap.group.element.target.equivalence [ fhir:value "narrower" ] ; fhir:ConceptMap.group.element.target.comment [ fhir:value "OMOP CONDITION_OCCURRENCE.condition_concept_id; vocabulary SNOMED." ] ] ] ] . # - ontology header ------------------------------------------------------------ a owl:Ontology ; owl:imports fhir:fhir.ttl . # -------------------------------------------------------------------------------------