Generated Narrative: CodeSystem protect-child-omop-vocabulary

Properties

This code system defines the following properties for its concepts

NameCodeTypeDescription
domaindomainstringOMOP domain_id
classclassstringOMOP concept_class_id

Concepts

This case-sensitive code system https://hl7.eu/fhir/ig/hl7.eu.fhir.protect-child/CodeSystem/protect-child-omop-vocabulary defines the following codes:

CodeDisplayDefinitiondomainclass
2000000007 has organ donorPROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): has organ donor.RelationshipRelationship
2000000008 is organ donor forPROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): is organ donor for.RelationshipRelationship
2000000009 Graft-to-recipient weight ratioPROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Graft-to-recipient weight ratio.MeasurementObservable Entity
2000000010 Donor–recipient vessel mismatchPROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Donor–recipient vessel mismatch.ObservationClinical Observation
2000000016 Type of donorPROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Type of donor.ObservationClinical Observation
2000000017 Duct-to-Duct AnastomosisPROTECT-CHILD custom OMOP concept (Procedure domain, Procedure): Duct-to-Duct Anastomosis.ProcedureProcedure
2000000018 HepaticocholedochostomyPROTECT-CHILD custom OMOP concept (Procedure domain, Procedure): Hepaticocholedochostomy.ProcedureProcedure
2000000019 Bilioenteric AnastomosisPROTECT-CHILD custom OMOP concept (Procedure domain, Procedure): Bilioenteric Anastomosis.ProcedureProcedure
2000000031 Liver ischemiaPROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Liver ischemia.ConditionDisorder
2000000028 Histological evidence of monoclonal proliferationPROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Histological evidence of monoclonal proliferation.ObservationClinical Observation
2000000033 Histological evidence of MMF-related enteropathyPROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Histological evidence of MMF-related enteropathy.ConditionClinical Finding
2000000037 Histological evidence on biospyPROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Histological evidence on biospy.ObservationClinical Observation
2000000038 Systolic blood pressure loadPROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Systolic blood pressure load.MeasurementObservable Entity
2000000039 Diastolic blood pressure loadPROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Diastolic blood pressure load.MeasurementObservable Entity
2000000040 Systolic blood pressure DipPROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Systolic blood pressure Dip.MeasurementObservable Entity
2000000041 Diastolic blood pressure loadPROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Diastolic blood pressure load.MeasurementObservable Entity
2000000023 Liver early allograft dysfunctionPROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Liver early allograft dysfunction.ConditionClinical Finding
2000000014 Mycophenolate poisoningPROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Mycophenolate poisoning.ConditionDisorder
2000000015 mTOR inhibitors poisoningPROTECT-CHILD custom OMOP concept (Condition domain, Disorder): mTOR inhibitors poisoning.ConditionDisorder
2000000024 Relapse of primary immunomediated diseasePROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Relapse of primary immunomediated disease.ConditionClinical Finding
2000000029 AlloimmunizationPROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Alloimmunization.ConditionClinical Finding
2000000042 Primary diagnosis confirmed by histologyPROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Primary diagnosis confirmed by histology.ObservationClinical Finding
2000000002 Pre-transplant visitPROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Pre-transplant visit.ObservationClinical Finding
2000000003 Clinical event visitPROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Clinical event visit.ObservationClinical Finding
2000000004 Termination visitPROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Termination visit.ObservationClinical Finding
2000000043 Ongoing medicationPROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Ongoing medication.ObservationClinical Finding
2000000013 Measurement of trough drug concentrationPROTECT-CHILD custom OMOP concept (Measurement domain, Procedure): Measurement of trough drug concentration.MeasurementProcedure
2000000022 Measured AUC for [drug]PROTECT-CHILD custom OMOP concept (Measurement domain, Lab Test): Measured AUC for [drug].MeasurementLab Test
2000000044 Banff Classification of Allograft Pathology: Category 1PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 1.MeasurementStaging / Scales
2000000045 Banff Classification of Allograft Pathology: Category 2PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 2.MeasurementStaging / Scales
2000000046 Banff Classification of Allograft Pathology: Category 3PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 3.MeasurementStaging / Scales
2000000047 Banff Classification of Allograft Pathology: Category 4PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 4.MeasurementStaging / Scales
2000000048 Banff Classification of Allograft Pathology: Category 5PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 5.MeasurementStaging / Scales
2000000032 Delayed graft functionPROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Delayed graft function.ConditionDisorder
2000000026 Hypoxic ischemic eventPROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Hypoxic ischemic event.ConditionDisorder
2000000035 Histological evidence of CNI toxicityPROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Histological evidence of CNI toxicity.ConditionClinical Finding
2000000049 Anti-gp210 antibody levelPROTECT-CHILD custom OMOP concept (Measurement domain, Procedure): Anti-gp210 antibody level.MeasurementProcedure
2000000050 Anti-sp100 antibody levelPROTECT-CHILD custom OMOP concept (Measurement domain, Procedure): Anti-sp100 antibody level.MeasurementProcedure
2000000051 MFI category: Weak Reaction (500-2k)PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): MFI category: Weak Reaction (500-2k).MeasurementStaging / Scales
2000000052 MFI category: Moderate Reaction (2k-4k)PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): MFI category: Moderate Reaction (2k-4k).MeasurementStaging / Scales
2000000053 MFI category: Strong Reaction (>4k)PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): MFI category: Strong Reaction (>4k).MeasurementStaging / Scales
2000000054 has findingPROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): has finding.RelationshipRelationship
2000000055 is finding ofPROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): is finding of.RelationshipRelationship
 <status value="draft"/> <experimental value="false"/> <date value="2026-09-28T06:51:47+00:00"/> <publisher value="Protect Child"/> <contact> <name value="Protect Child"/> <telecom> <system value="url"/> <value value="https://protect-child.eu/"/> </telecom> </contact> <description value="The study's own OMOP concepts (vocabulary_id PROTECT-CHILD, concept_id 2000000000 and above), for data-model values that have no standard concept in Athena. Codes are the OMOP concept_id; the ConceptMaps cite them under the OMOP system as they would appear in a PROTECT-CHILD OMOP instance."/> <caseSensitive value="true"/> <content value="complete"/> <count value="43"/> <property> <code value="domain"/> <description value="OMOP domain_id"/> <type value="string"/> </property> <property> <code value="class"/> <description value="OMOP concept_class_id"/> <type value="string"/> </property> <concept> <code value="2000000007"/> <display value="has organ donor"/> <definition value="PROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): has organ donor."/> <property> <code value="domain"/> <valueString value="Relationship"/> </property> <property> <code value="class"/> <valueString value="Relationship"/> </property> </concept> <concept> <code value="2000000008"/> <display value="is organ donor for"/> <definition value="PROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): is organ donor for."/> <property> <code value="domain"/> <valueString value="Relationship"/> </property> <property> <code value="class"/> <valueString value="Relationship"/> </property> </concept> <concept> <code value="2000000009"/> <display value="Graft-to-recipient weight ratio"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Graft-to-recipient weight ratio."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Observable Entity"/> </property> </concept> <concept> <code value="2000000010"/> <display value="Donor–recipient vessel mismatch"/> <definition value="PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Donor–recipient vessel mismatch."/> <property> <code value="domain"/> <valueString value="Observation"/> </property> <property> <code value="class"/> <valueString value="Clinical Observation"/> </property> </concept> <concept> <code value="2000000016"/> <display value="Type of donor"/> <definition value="PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Type of donor."/> <property> <code value="domain"/> <valueString value="Observation"/> </property> <property> <code value="class"/> <valueString value="Clinical Observation"/> </property> </concept> <concept> <code value="2000000017"/> <display value="Duct-to-Duct Anastomosis"/> <definition value="PROTECT-CHILD custom OMOP concept (Procedure domain, Procedure): Duct-to-Duct Anastomosis."/> <property> <code value="domain"/> <valueString value="Procedure"/> </property> <property> <code value="class"/> <valueString value="Procedure"/> </property> </concept> <concept> <code value="2000000018"/> <display value="Hepaticocholedochostomy"/> <definition value="PROTECT-CHILD custom OMOP concept (Procedure domain, Procedure): Hepaticocholedochostomy."/> <property> <code value="domain"/> <valueString value="Procedure"/> </property> <property> <code value="class"/> <valueString value="Procedure"/> </property> </concept> <concept> <code value="2000000019"/> <display value="Bilioenteric Anastomosis"/> <definition value="PROTECT-CHILD custom OMOP concept (Procedure domain, Procedure): Bilioenteric Anastomosis."/> <property> <code value="domain"/> <valueString value="Procedure"/> </property> <property> <code value="class"/> <valueString value="Procedure"/> </property> </concept> <concept> <code value="2000000031"/> <display value="Liver ischemia"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Liver ischemia."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Disorder"/> </property> </concept> <concept> <code value="2000000028"/> <display value="Histological evidence of monoclonal proliferation"/> <definition value="PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Histological evidence of monoclonal proliferation."/> <property> <code value="domain"/> <valueString value="Observation"/> </property> <property> <code value="class"/> <valueString value="Clinical Observation"/> </property> </concept> <concept> <code value="2000000033"/> <display value="Histological evidence of MMF-related enteropathy"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Histological evidence of MMF-related enteropathy."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000037"/> <display value="Histological evidence on biospy"/> <definition value="PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Observation): Histological evidence on biospy."/> <property> <code value="domain"/> <valueString value="Observation"/> </property> <property> <code value="class"/> <valueString value="Clinical Observation"/> </property> </concept> <concept> <code value="2000000038"/> <display value="Systolic blood pressure load"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Systolic blood pressure load."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Observable Entity"/> </property> </concept> <concept> <code value="2000000039"/> <display value="Diastolic blood pressure load"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Diastolic blood pressure load."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Observable Entity"/> </property> </concept> <concept> <code value="2000000040"/> <display value="Systolic blood pressure Dip"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Systolic blood pressure Dip."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Observable Entity"/> </property> </concept> <concept> <code value="2000000041"/> <display value="Diastolic blood pressure load"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Observable Entity): Diastolic blood pressure load."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Observable Entity"/> </property> </concept> <concept> <code value="2000000023"/> <display value="Liver early allograft dysfunction"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Liver early allograft dysfunction."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000014"/> <display value="Mycophenolate poisoning"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Mycophenolate poisoning."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Disorder"/> </property> </concept> <concept> <code value="2000000015"/> <display value="mTOR inhibitors poisoning"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): mTOR inhibitors poisoning."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Disorder"/> </property> </concept> <concept> <code value="2000000024"/> <display value="Relapse of primary immunomediated disease"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Relapse of primary immunomediated disease."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000029"/> <display value="Alloimmunization"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Alloimmunization."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000042"/> <display value="Primary diagnosis confirmed by histology"/> <definition value="PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Primary diagnosis confirmed by histology."/> <property> <code value="domain"/> <valueString value="Observation"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000002"/> <display value="Pre-transplant visit"/> <definition value="PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Pre-transplant visit."/> <property> <code value="domain"/> <valueString value="Observation"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000003"/> <display value="Clinical event visit"/> <definition value="PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Clinical event visit."/> <property> <code value="domain"/> <valueString value="Observation"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000004"/> <display value="Termination visit"/> <definition value="PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Termination visit."/> <property> <code value="domain"/> <valueString value="Observation"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000043"/> <display value="Ongoing medication"/> <definition value="PROTECT-CHILD custom OMOP concept (Observation domain, Clinical Finding): Ongoing medication."/> <property> <code value="domain"/> <valueString value="Observation"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000013"/> <display value="Measurement of trough drug concentration"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Procedure): Measurement of trough drug concentration."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Procedure"/> </property> </concept> <concept> <code value="2000000022"/> <display value="Measured AUC for [drug]"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Lab Test): Measured AUC for [drug]."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Lab Test"/> </property> </concept> <concept> <code value="2000000044"/> <display value="Banff Classification of Allograft Pathology: Category 1"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 1."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Staging / Scales"/> </property> </concept> <concept> <code value="2000000045"/> <display value="Banff Classification of Allograft Pathology: Category 2"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 2."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Staging / Scales"/> </property> </concept> <concept> <code value="2000000046"/> <display value="Banff Classification of Allograft Pathology: Category 3"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 3."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Staging / Scales"/> </property> </concept> <concept> <code value="2000000047"/> <display value="Banff Classification of Allograft Pathology: Category 4"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 4."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Staging / Scales"/> </property> </concept> <concept> <code value="2000000048"/> <display value="Banff Classification of Allograft Pathology: Category 5"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): Banff Classification of Allograft Pathology: Category 5."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Staging / Scales"/> </property> </concept> <concept> <code value="2000000032"/> <display value="Delayed graft function"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Delayed graft function."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Disorder"/> </property> </concept> <concept> <code value="2000000026"/> <display value="Hypoxic ischemic event"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Disorder): Hypoxic ischemic event."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Disorder"/> </property> </concept> <concept> <code value="2000000035"/> <display value="Histological evidence of CNI toxicity"/> <definition value="PROTECT-CHILD custom OMOP concept (Condition domain, Clinical Finding): Histological evidence of CNI toxicity."/> <property> <code value="domain"/> <valueString value="Condition"/> </property> <property> <code value="class"/> <valueString value="Clinical Finding"/> </property> </concept> <concept> <code value="2000000049"/> <display value="Anti-gp210 antibody level"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Procedure): Anti-gp210 antibody level."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Procedure"/> </property> </concept> <concept> <code value="2000000050"/> <display value="Anti-sp100 antibody level"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Procedure): Anti-sp100 antibody level."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Procedure"/> </property> </concept> <concept> <code value="2000000051"/> <display value="MFI category: Weak Reaction (500-2k)"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): MFI category: Weak Reaction (500-2k)."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Staging / Scales"/> </property> </concept> <concept> <code value="2000000052"/> <display value="MFI category: Moderate Reaction (2k-4k)"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): MFI category: Moderate Reaction (2k-4k)."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Staging / Scales"/> </property> </concept> <concept> <code value="2000000053"/> <display value="MFI category: Strong Reaction (>4k)"/> <definition value="PROTECT-CHILD custom OMOP concept (Measurement domain, Staging / Scales): MFI category: Strong Reaction (>4k)."/> <property> <code value="domain"/> <valueString value="Measurement"/> </property> <property> <code value="class"/> <valueString value="Staging / Scales"/> </property> </concept> <concept> <code value="2000000054"/> <display value="has finding"/> <definition value="PROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): has finding."/> <property> <code value="domain"/> <valueString value="Relationship"/> </property> <property> <code value="class"/> <valueString value="Relationship"/> </property> </concept> <concept> <code value="2000000055"/> <display value="is finding of"/> <definition value="PROTECT-CHILD custom OMOP concept (Relationship domain, Relationship): is finding of."/> <property> <code value="domain"/> <valueString value="Relationship"/> </property> <property> <code value="class"/> <valueString value="Relationship"/> </property> </concept> </CodeSystem>