INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/hl7-eu/manifest4imaging --branch test repo DEBUG:root:Time to deadline 35879.998038 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.129478 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35878.160652 seconds npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported added 140 packages in 6s 15 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.4.2 npm notice Changelog: npm notice Run `npm install -g npm@11.4.2` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/hl7-eu/manifest4imaging/ -out /scratch/repo DEBUG:root:Time to deadline 35871.867584 seconds FHIR IG Publisher Version 2.0.8 (Git# e7d965b03a28). Built 2025-06-27T22:18:09.321Z (4 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/hl7-eu/manifest4imaging/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Wednesday, July 2, 2025, 3:19:51 PM Coordinated Universal Time (2025-07-02T15:19:51Z) Build FHIR IG from /scratch/repo (00:00.028 / 00:00.029, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.031, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.003 / 00:00.034, 97Mb) Found dependency on hl7.terminology.r5#6.3.0 in Sushi config. Pre-installing (00:00.004 / 00:00.039, 97Mb) Installing hl7.terminology.r5#6.3.0 to the package cache  Fetching:  Installing hl7.terminology.r5#6.3.0  done. Found dependency on hl7.fhir.uv.extensions#5.2.0 in Sushi config. Pre-installing (00:03.438 / 00:03.477, 204Mb) Installing hl7.fhir.uv.extensions#5.2.0 to the package cache  Fetching:  Installing hl7.fhir.uv.extensions#5.2.0  done. Found dependency on hl7.fhir.uv.ips#1.1.0 in Sushi config. Pre-installing (00:01.003 / 00:04.480, 244Mb) Installing hl7.fhir.uv.ips#1.1.0 to the package cache  Fetching:  Installing hl7.fhir.uv.ips#1.1.0  done. Found dependency on hl7.fhir.eu.extensions#0.1.1-ballot in Sushi config. Pre-installing (00:01.564 / 00:06.045, 276Mb) Installing hl7.fhir.eu.extensions#0.1.1-ballot to the package cache  Fetching:  Installing hl7.fhir.eu.extensions#0.1.1-ballot  done. Found dependency on hl7.fhir.eu.base-r5#0.1.0-ballot in Sushi config. Pre-installing (00:00.245 / 00:06.290, 281Mb) Installing hl7.fhir.eu.base-r5#0.1.0-ballot to the package cache  Fetching:  Installing hl7.fhir.eu.base-r5#0.1.0-ballot  done. Run Sushi on /scratch/repo (00:04.728 / 00:11.019, 284Mb) Sushi: info Running SUSHI v3.16.2 (implements FHIR Shorthand specification v3.0.0) (00:01.130 / 00:12.150, 294Mb) Sushi: info Arguments: (00:00.000 / 00:12.150, 294Mb) Sushi: info --require-latest (00:00.000 / 00:12.151, 294Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:12.151, 294Mb) Sushi: info /scratch/repo (00:00.000 / 00:12.151, 294Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.737 / 00:12.889, 294Mb) Sushi: info Importing FSH text... (00:00.154 / 00:13.043, 294Mb) Sushi: info Preprocessed 102 documents with 155 aliases. (00:01.021 / 00:14.064, 294Mb) Sushi: info Imported 87 definitions and 39 instances. (00:00.704 / 00:14.769, 294Mb) Sushi: info Resolved hl7.fhir.uv.tools.r5#latest to concrete version 0.5.0 (00:00.726 / 00:15.496, 294Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r5#0.5.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r5/0.5.0 (00:00.001 / 00:15.498, 294Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r5#0.5.0 (00:00.920 / 00:16.418, 294Mb) Sushi: info Cached hl7.fhir.uv.tools.r5#0.5.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r5#0.5.0 (00:00.003 / 00:16.421, 294Mb) Sushi: info Loaded hl7.fhir.uv.tools.r5#0.5.0 with 96 resources (00:00.085 / 00:16.507, 294Mb) Sushi: info Loaded hl7.terminology.r5#6.3.0 with 4374 resources (00:02.135 / 00:18.643, 294Mb) Sushi: info Loaded hl7.fhir.uv.extensions#5.2.0 with 759 resources (00:00.417 / 00:19.060, 294Mb) Sushi: info Loaded hl7.fhir.uv.ips#1.1.0 with 104 resources (00:00.102 / 00:19.163, 294Mb) Sushi: info Loaded hl7.fhir.eu.extensions#0.1.1-ballot with 7 resources (00:00.004 / 00:19.167, 294Mb) Sushi: info Loaded hl7.fhir.eu.base-r5#0.1.0-ballot with 22 resources (00:00.017 / 00:19.185, 294Mb) Sushi: info Attempting to download hl7.fhir.r5.core#5.0.0 from https://packages.fhir.org/hl7.fhir.r5.core/5.0.0 (00:00.000 / 00:19.186, 294Mb) Sushi: info Downloaded hl7.fhir.r5.core#5.0.0 (00:04.049 / 00:23.235, 294Mb) Sushi: info Cached hl7.fhir.r5.core#5.0.0 to /home/fhiruser/.fhir/packages/hl7.fhir.r5.core#5.0.0 (00:00.002 / 00:23.238, 294Mb) Sushi: info Loaded hl7.fhir.r5.core#5.0.0 with 2968 resources (00:01.460 / 00:24.698, 294Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 62 resources (00:00.046 / 00:24.745, 294Mb) Sushi: info Converting FSH to FHIR resources... (00:00.022 / 00:24.767, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:29.186 / 00:53.954, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:53.955, 294Mb) Sushi: Line: 9 (00:00.000 / 00:53.955, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.054 / 00:54.010, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.010, 294Mb) Sushi: Line: 12 (00:00.000 / 00:54.010, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.046 / 00:54.057, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.057, 294Mb) Sushi: Line: 15 (00:00.000 / 00:54.057, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.050 / 00:54.108, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.108, 294Mb) Sushi: Line: 18 (00:00.000 / 00:54.108, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.051 / 00:54.160, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.160, 294Mb) Sushi: Line: 21 (00:00.000 / 00:54.160, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.049 / 00:54.210, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.210, 294Mb) Sushi: Line: 24 (00:00.000 / 00:54.211, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.052 / 00:54.263, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.263, 294Mb) Sushi: Line: 27 (00:00.000 / 00:54.264, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.046 / 00:54.310, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.311, 294Mb) Sushi: Line: 30 (00:00.000 / 00:54.311, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.043 / 00:54.354, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.355, 294Mb) Sushi: Line: 33 (00:00.000 / 00:54.355, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.045 / 00:54.401, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.401, 294Mb) Sushi: Line: 38 (00:00.000 / 00:54.401, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.045 / 00:54.447, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.447, 294Mb) Sushi: Line: 41 (00:00.000 / 00:54.448, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.049 / 00:54.498, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.498, 294Mb) Sushi: Line: 44 (00:00.000 / 00:54.498, 294Mb) Sushi: error Cannot use canonical URL of ImReportProvider because it does not exist. Be sure that ImReportProvider exists and it has a URL. (00:00.044 / 00:54.543, 294Mb) Sushi: File: /scratch/repo/input/fsh/profiles/im-ihemhd-documentreference.fsh (00:00.000 / 00:54.543, 294Mb) Sushi: Line: 47 (00:00.000 / 00:54.543, 294Mb) Sushi: info Converted 71 FHIR StructureDefinitions. (00:04.564 / 00:59.108, 294Mb) Sushi: info Converted 4 FHIR CodeSystems. (00:00.165 / 00:59.273, 294Mb) Sushi: info Converted 12 FHIR ValueSets. (00:00.403 / 00:59.677, 294Mb) Sushi: info Converted 39 FHIR instances. (00:08.985 / 01:08.662, 294Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.010 / 01:08.673, 294Mb) Sushi: info Exported 120 FHIR resources as JSON. (00:00.478 / 01:09.151, 294Mb) Sushi: info Assembling Implementation Guide sources... (00:00.004 / 01:09.156, 294Mb) Sushi: info Generated ImplementationGuide-hl7.fhir.eu.imaging-manifest-r5.json (00:00.113 / 01:09.269, 294Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 01:09.270, 294Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 01:09.272, 294Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:09.272, 294Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 01:09.272, 294Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 01:09.272, 294Mb) Sushi: | | 67 | 4 | 0 | 0 | | (00:00.000 / 01:09.272, 294Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:09.273, 294Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:09.273, 294Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 01:09.273, 294Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 01:09.273, 294Mb) Sushi: | | 12 | 4 | 39 | | (00:00.000 / 01:09.273, 294Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:09.273, 294Mb) Sushi: | | (00:00.000 / 01:09.274, 294Mb) Sushi: =================================================================== (00:00.000 / 01:09.274, 294Mb) Sushi: | Swim back to School of FSH 13 Errors 0 Warnings | (00:00.000 / 01:09.274, 294Mb) Sushi: =================================================================== (00:00.000 / 01:09.274, 294Mb) Sushi couldn't be run. Complete output from running Sushi : (00:00.044 / 01:09.319, 294Mb) Note: Check that Sushi is installed correctly ("npm install -g fsh-sushi". On windows, get npm from https://www.npmjs.com/get-npm) (00:00.000 / 01:09.319, 294Mb) Exception: Process exited with an error: 13 (Exit value: 13) (00:00.000 / 01:09.319, 294Mb) Publishing Content Failed: Process exited with an error: 13 (Exit value: 13) (00:00.000 / 01:09.320, 294Mb) (00:00.000 / 01:09.320, 294Mb) Use -? to get command line help (00:00.000 / 01:09.320, 294Mb) (00:00.000 / 01:09.320, 294Mb) Stack Dump (for debugging): (00:00.000 / 01:09.320, 294Mb) org.apache.commons.exec.ExecuteException: Process exited with an error: 13 (Exit value: 13) at org.apache.commons.exec.DefaultExecutor.executeInternal(DefaultExecutor.java:404) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:166) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:153) at org.hl7.fhir.igtools.publisher.FSHRunner.runFsh(FSHRunner.java:89) at org.hl7.fhir.igtools.publisher.Publisher.initialize(Publisher.java:2778) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:1068) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:15771)