HL7 Europe Laboratory Report
0.2.0-ci - ci-build 150

HL7 Europe Laboratory Report, published by HL7 Europe. This guide is not an authorized publication; it is the continuous build for version 0.2.0-ci built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/laboratory/ and changes regularly. See the Directory of published versions

: A.4 - Specimen information model to this guide - XML Representation

Page standards status: Informative Maturity Level: 2

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<ConceptMap xmlns="http://hl7.org/fhir">
  <id value="specimen2FHIR-eu-lab"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ConceptMap specimen2FHIR-eu-lab</b></p><a name="specimen2FHIR-eu-lab"> </a><a name="hcspecimen2FHIR-eu-lab"> </a><a name="specimen2FHIR-eu-lab-en-US"> </a><p>Mapping from <a href="StructureDefinition-SpecimenLab.html">A.4 - Specimen information</a> to <a href="StructureDefinition-Specimen-eu-lab.html">Specimen: Laboratory</a></p><br/><p><b>Group 1 </b>Mapping from <a href="StructureDefinition-SpecimenLab.html">A.4 - Specimen information</a> to <a href="StructureDefinition-Specimen-eu-lab.html">Specimen: Laboratory</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td><td><b>Comment</b></td></tr><tr><td>SpecimenLab.identifier (A.4.1 Specimen identifier)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>Specimen.identifier</td><td/></tr><tr><td>SpecimenLab.speciesType (A.4.2 Type of species)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td>Specimen.subject.extension:patient-animal.extension:species</td><td>subject.ofType(Patient)</td></tr><tr><td>SpecimenLab.material (A.4.3 Material)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>Specimen.type</td><td/></tr><tr><td>SpecimenLab.collected (A.4.4 Collection period)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>Specimen.collection.collected[x]</td><td/></tr><tr><td>SpecimenLab.anatomicLocation (A.4.5 Anatomic location)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td>Specimen.collection.bodySite</td><td/></tr><tr><td>SpecimenLab.anatomicLocation (A.4.5 Anatomic location)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td>Specimen.collection.extension:bodySite</td><td>see Group 2 for details</td></tr><tr><td>SpecimenLab.morphology (A.4.6 Morphology)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td>Specimen.collection.extension:bodySite</td><td>see Group 2 for details</td></tr><tr><td>SpecimenLab.sourceDevice (A.4.7 Source Device)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#relatedto" title="relatedto">is related to</a></td><td>Specimen.subject</td><td>When the device (e.g. the catheter) is what has been examinated.
If the device is meant instead as the mean used to collect the specimen (e.g blood collected from the catheter), then, this is represented by the collectionMethod attribute and mapped into the Specimen.collection.method</td></tr><tr><td>SpecimenLab.collectionMethod (A.4.8 Collection procedure/method)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>Specimen.collection.method</td><td/></tr><tr><td>SpecimenLab.receivedDateTime (A.4.9 Received date)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>Specimen.receivedTime</td><td/></tr></table><hr/><p><b>Group 2 </b>Mapping from <a href="StructureDefinition-SpecimenLab.html">A.4 - Specimen information</a> to <a href="StructureDefinition-BodyStructure-eu-lab.html">Body structure: Laboratory</a></p><table class="grid"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td><td><b>Comment</b></td></tr><tr><td>SpecimenLab.anatomicLocation (A.4.5 Anatomic location)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>BodyStructure.location</td><td/></tr><tr><td>SpecimenLab.anatomicLocation (A.4.5 Anatomic location)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>BodyStructure.extension:laterality</td><td>For details about laterality</td></tr><tr><td>SpecimenLab.morphology (A.4.6 Morphology)</td><td><a href="http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent" title="equivalent">is equivalent to</a></td><td>BodyStructure.morphology</td><td/></tr></table></div>
  </text>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm">
    <valueInteger value="2"/>
  </extension>
  <extension
             url="http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status">
    <valueCode value="informative"/>
  </extension>
  <url value="http://hl7.eu/fhir/laboratory/ConceptMap/specimen2FHIR-eu-lab"/>
  <version value="0.2.0-ci"/>
  <name value="Specimen2Fhir"/>
  <title value="eHN Specimen to this guide Map"/>
  <status value="draft"/>
  <experimental value="true"/>
  <date value="2024-12-14T06:50:57+00:00"/>
  <publisher value="HL7 Europe"/>
  <contact>
    <name value="HL7 Europe"/>
    <telecom>
      <system value="url"/>
      <value value="http://hl7.eu"/>
    </telecom>
  </contact>
  <description value="eHN Specimen Model to this guide Map"/>
  <jurisdiction>
    <coding>
      <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/>
      <code value="150"/>
      <display value="Europe"/>
    </coding>
  </jurisdiction>
  <purpose
           value="It shows how the Specimen data set defined by the EU eHN guidelines is mapped into this guide"/>
  <copyright
             value="Used by permission of HL7 Europe, all rights reserved Creative Commons License"/>
  <sourceUri
             value="http://hl7.eu/fhir/laboratory/StructureDefinition/SpecimenLab"/>
  <targetUri
             value="http://hl7.eu/fhir/laboratory/StructureDefinition/Specimen-eu-lab"/>
  <group>
    <source
            value="http://hl7.eu/fhir/laboratory/StructureDefinition/SpecimenLab"/>
    <target
            value="http://hl7.eu/fhir/laboratory/StructureDefinition/Specimen-eu-lab"/>
    <element>
      <code value="SpecimenLab.identifier"/>
      <display value="A.4.1 Specimen identifier"/>
      <target>
        <code value="Specimen.identifier"/>
        <equivalence value="equivalent"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.speciesType"/>
      <display value="A.4.2 Type of species"/>
      <target>
        <code
              value="Specimen.subject.extension:patient-animal.extension:species"/>
        <equivalence value="relatedto"/>
        <comment value="subject.ofType(Patient)"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.material"/>
      <display value="A.4.3 Material"/>
      <target>
        <code value="Specimen.type"/>
        <equivalence value="equivalent"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.collected"/>
      <display value="A.4.4 Collection period"/>
      <target>
        <code value="Specimen.collection.collected[x]"/>
        <equivalence value="equivalent"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.anatomicLocation"/>
      <display value="A.4.5 Anatomic location"/>
      <target>
        <code value="Specimen.collection.bodySite"/>
        <equivalence value="relatedto"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.anatomicLocation"/>
      <display value="A.4.5 Anatomic location"/>
      <target>
        <code value="Specimen.collection.extension:bodySite"/>
        <equivalence value="relatedto"/>
        <comment value="see Group 2 for details"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.morphology"/>
      <display value="A.4.6 Morphology"/>
      <target>
        <code value="Specimen.collection.extension:bodySite"/>
        <equivalence value="relatedto"/>
        <comment value="see Group 2 for details"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.sourceDevice"/>
      <display value="A.4.7 Source Device"/>
      <target>
        <code value="Specimen.subject"/>
        <equivalence value="relatedto"/>
        <comment
                 value="When the device (e.g. the catheter) is what has been examinated.
If the device is meant instead as the mean used to collect the specimen (e.g blood collected from the catheter), then, this is represented by the collectionMethod attribute and mapped into the Specimen.collection.method"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.collectionMethod"/>
      <display value="A.4.8 Collection procedure/method"/>
      <target>
        <code value="Specimen.collection.method"/>
        <equivalence value="equivalent"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.receivedDateTime"/>
      <display value="A.4.9 Received date"/>
      <target>
        <code value="Specimen.receivedTime"/>
        <equivalence value="equivalent"/>
      </target>
    </element>
  </group>
  <group>
    <source
            value="http://hl7.eu/fhir/laboratory/StructureDefinition/SpecimenLab"/>
    <target
            value="http://hl7.eu/fhir/laboratory/StructureDefinition/BodyStructure-eu-lab"/>
    <element>
      <code value="SpecimenLab.anatomicLocation"/>
      <display value="A.4.5 Anatomic location"/>
      <target>
        <code value="BodyStructure.location"/>
        <equivalence value="equivalent"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.anatomicLocation"/>
      <display value="A.4.5 Anatomic location"/>
      <target>
        <code value="BodyStructure.extension:laterality"/>
        <equivalence value="equivalent"/>
        <comment value="For details about laterality"/>
      </target>
    </element>
    <element>
      <code value="SpecimenLab.morphology"/>
      <display value="A.4.6 Morphology"/>
      <target>
        <code value="BodyStructure.morphology"/>
        <equivalence value="equivalent"/>
      </target>
    </element>
  </group>
</ConceptMap>