INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/hl7-eu/hdr --branch gc-dev repo DEBUG:root:Time to deadline 35879.997996 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35878.723938 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35877.704585 seconds npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported added 139 packages in 8s 14 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.6.2 npm notice Changelog: npm notice Run `npm install -g npm@11.6.2` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/hl7-eu/hdr/ -out /scratch/repo DEBUG:root:Time to deadline 35869.806575 seconds FHIR IG Publisher Version 2.0.22 (Git# 6bbdf7dc5537). Built 2025-10-22T10:27:38.176Z (5 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/hl7-eu/hdr/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Monday, October 27, 2025, 4:56:28 PM Coordinated Universal Time (2025-10-27T16:56:28Z) Build FHIR IG from /scratch/repo (00:00.027 / 00:00.028, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.030, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.003 / 00:00.034, 97Mb) Found dependency on hl7.fhir.uv.ips#2.0.0 in Sushi config. Pre-installing (00:00.005 / 00:00.040, 97Mb) Installing hl7.fhir.uv.ips#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.ips#2.0.0  done. Found dependency on hl7.fhir.extensions.r5#4.0.1 in Sushi config. Pre-installing (00:01.826 / 00:01.866, 64Mb) Installing hl7.fhir.extensions.r5#4.0.1 to the package cache  Fetching: Error fetching https://packages2.fhir.org/packages/hl7.fhir.extensions.r5: Not Found Error fetching https://packages.fhir.org/hl7.fhir.extensions.r5: Not Found Unable to install hl7.fhir.extensions.r5#4.0.1: Unable to resolve package id hl7.fhir.extensions.r5#4.0.1 (00:01.075 / 00:02.942, 112Mb) Trying to go on (00:00.000 / 00:02.942, 112Mb) Found dependency on hl7.fhir.eu.extensions.r4#0.1.1 in Sushi config. Pre-installing (00:00.000 / 00:02.942, 112Mb) Installing hl7.fhir.eu.extensions.r4#0.1.1 to the package cache  Fetching:  Installing hl7.fhir.eu.extensions.r4#0.1.1  done. Found dependency on hl7.fhir.eu.laboratory#0.1.1 in Sushi config. Pre-installing (00:00.315 / 00:03.258, 117Mb) Installing hl7.fhir.eu.laboratory#0.1.1 to the package cache  Fetching:  Installing hl7.fhir.eu.laboratory#0.1.1  done. Found dependency on hl7.fhir.eu.base#0.1.0 in Sushi config. Pre-installing (00:00.651 / 00:03.909, 120Mb) Installing hl7.fhir.eu.base#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.eu.base#0.1.0  done. Found dependency on ihe.pharm.mpd.r4#1.0.0-comment-2 in Sushi config. Pre-installing (00:00.394 / 00:04.303, 133Mb) Installing ihe.pharm.mpd.r4#1.0.0-comment-2 to the package cache  Fetching:  Installing ihe.pharm.mpd.r4#1.0.0-comment-2  done. Run Sushi on /scratch/repo (00:00.493 / 00:04.797, 136Mb) Sushi: info Running SUSHI v3.16.5 (implements FHIR Shorthand specification v3.0.0) (00:00.726 / 00:05.523, 145Mb) Sushi: info Arguments: (00:00.000 / 00:05.524, 145Mb) Sushi: info --require-latest (00:00.000 / 00:05.524, 145Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:05.524, 145Mb) Sushi: info /scratch/repo (00:00.000 / 00:05.524, 145Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.733 / 00:06.258, 152Mb) Sushi: info Importing FSH text... (00:00.164 / 00:06.422, 152Mb) Sushi: info Preprocessed 106 documents with 204 aliases. (00:00.969 / 00:07.391, 152Mb) Sushi: info Imported 81 definitions and 89 instances. (00:00.558 / 00:07.950, 152Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.145 / 00:08.096, 152Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.8.0 (00:00.631 / 00:08.728, 152Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.8.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.8.0 (00:00.001 / 00:08.729, 152Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.8.0 (00:00.825 / 00:09.554, 152Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.8.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.8.0 (00:00.002 / 00:09.557, 152Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.8.0 with 110 resources (00:00.087 / 00:09.644, 152Mb) Sushi: info Resolved hl7.terminology.r4#latest to concrete version 6.5.0 (00:00.446 / 00:10.090, 152Mb) Sushi: info Attempting to download hl7.terminology.r4#6.5.0 from https://packages.fhir.org/hl7.terminology.r4/6.5.0 (00:00.000 / 00:10.091, 152Mb) Sushi: info Downloaded hl7.terminology.r4#6.5.0 (00:02.908 / 00:12.999, 152Mb) Sushi: info Cached hl7.terminology.r4#6.5.0 to /home/fhiruser/.fhir/packages/hl7.terminology.r4#6.5.0 (00:00.001 / 00:13.001, 152Mb) Sushi: info Loaded hl7.terminology.r4#6.5.0 with 4392 resources (00:01.847 / 00:14.848, 152Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r4#latest to concrete version 5.2.0 (00:00.525 / 00:15.373, 152Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 00:15.374, 152Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.455 / 00:16.829, 152Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.001 / 00:16.830, 152Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.469 / 00:17.300, 152Mb) Sushi: info Loaded hl7.fhir.uv.ips#2.0.0 with 74 resources (00:00.093 / 00:17.393, 152Mb) Sushi: info Loading supplemental version of FHIR to support extensions from hl7.fhir.extensions.r5 (00:00.000 / 00:17.394, 152Mb) Sushi: info Attempting to download hl7.fhir.r5.core#5.0.0 from https://packages.fhir.org/hl7.fhir.r5.core/5.0.0 (00:00.024 / 00:17.419, 152Mb) Sushi: info Downloaded hl7.fhir.r5.core#5.0.0 (00:04.135 / 00:21.555, 152Mb) Sushi: info Cached hl7.fhir.r5.core#5.0.0 to /home/fhiruser/.fhir/packages/hl7.fhir.r5.core#5.0.0 (00:00.003 / 00:21.559, 152Mb) Sushi: info Loaded hl7.fhir.r5.core#5.0.0 with 2968 resources (00:01.564 / 00:23.123, 152Mb) Sushi: info Loaded hl7.fhir.eu.extensions.r4#0.1.1 with 10 resources (00:00.006 / 00:23.130, 152Mb) Sushi: info Loaded hl7.fhir.eu.laboratory#0.1.1 with 63 resources (00:00.054 / 00:23.184, 152Mb) Sushi: info Loaded hl7.fhir.eu.base#0.1.0 with 16 resources (00:00.017 / 00:23.202, 152Mb) Sushi: info Loaded ihe.pharm.mpd.r4#1.0.0-comment-2 with 48 resources (00:00.020 / 00:23.223, 152Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.001 / 00:23.224, 152Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:03.431 / 00:26.655, 152Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.001 / 00:26.657, 152Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.634 / 00:28.291, 152Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.009 / 00:28.301, 152Mb) Sushi: info Converting FSH to FHIR resources... (00:00.029 / 00:28.331, 152Mb) Sushi: error No definition for the type "LocationEu" could be found. (00:02.707 / 00:31.039, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/bundle-hdr.fsh (00:00.000 / 00:31.039, 152Mb) Sushi: Line: 87 (00:00.000 / 00:31.040, 152Mb) Sushi: error Cannot create presentedForm extension; unable to locate extension definition for: DocumentPresentedForm. (00:02.906 / 00:33.946, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/composition-hdr.fsh (00:00.000 / 00:33.946, 152Mb) Sushi: Line: 11 - 12 (00:00.000 / 00:33.947, 152Mb) Sushi: error No element found at path extension[presentedForm] for CardRule in CompositionEuHdr, skipping rule (00:00.001 / 00:33.948, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/composition-hdr.fsh (00:00.000 / 00:33.948, 152Mb) Sushi: Line: 11 - 12 (00:00.000 / 00:33.948, 152Mb) Sushi: error No element found at path extension[presentedForm] for CaretValueRule in CompositionEuHdr, skipping rule (00:00.001 / 00:33.950, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/composition-hdr.fsh (00:00.000 / 00:33.951, 152Mb) Sushi: Line: 13 (00:00.000 / 00:33.952, 152Mb) Sushi: error No element found at path extension[presentedForm].valueAttachment.contentType for CaretValueRule in CompositionEuHdr, skipping rule (00:00.000 / 00:33.952, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/composition-hdr.fsh (00:00.000 / 00:33.953, 152Mb) Sushi: Line: 16 (00:00.000 / 00:33.953, 152Mb) Sushi: error No element found at path extension[presentedForm].valueAttachment.contentType for CaretValueRule in CompositionEuHdr, skipping rule (00:00.001 / 00:33.954, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/composition-hdr.fsh (00:00.000 / 00:33.954, 152Mb) Sushi: Line: 17 (00:00.000 / 00:33.955, 152Mb) Sushi: error No element found at path extension[presentedForm].valueAttachment.data for CaretValueRule in CompositionEuHdr, skipping rule (00:00.001 / 00:33.956, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/composition-hdr.fsh (00:00.000 / 00:33.956, 152Mb) Sushi: Line: 18 (00:00.000 / 00:33.956, 152Mb) Sushi: error No element found at path extension[presentedForm].valueAttachment.url for CaretValueRule in CompositionEuHdr, skipping rule (00:00.002 / 00:33.959, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/composition-hdr.fsh (00:00.000 / 00:33.959, 152Mb) Sushi: Line: 19 (00:00.000 / 00:33.959, 152Mb) Sushi: error No element found at path extension[presentedForm].extension for CardRule in CompositionEuHdr, skipping rule (00:03.122 / 00:37.082, 152Mb) Sushi: error No element found at path extension[presentedForm] for CaretValueRule in CompositionEuHdrObligation, skipping rule (00:00.886 / 00:37.968, 152Mb) Sushi: File: /scratch/repo/input/fsh/rulesSet/rulesSet-common.fsh (00:00.000 / 00:37.969, 152Mb) Sushi: Line: 124 (00:00.000 / 00:37.969, 152Mb) Sushi: Applied in File: /scratch/repo/input/fsh/obligations/composition-hdr.fsh (00:00.000 / 00:37.969, 152Mb) Sushi: Applied on Line: 10 - 11 (00:00.000 / 00:37.969, 152Mb) Sushi: error No element found at path extension[presentedForm] for CaretValueRule in CompositionEuHdrObligation, skipping rule (00:00.001 / 00:37.971, 152Mb) Sushi: File: /scratch/repo/input/fsh/rulesSet/rulesSet-common.fsh (00:00.000 / 00:37.971, 152Mb) Sushi: Line: 125 (00:00.000 / 00:37.971, 152Mb) Sushi: Applied in File: /scratch/repo/input/fsh/obligations/composition-hdr.fsh (00:00.000 / 00:37.972, 152Mb) Sushi: Applied on Line: 10 - 11 (00:00.000 / 00:37.972, 152Mb) Sushi: error No element found at path extension[presentedForm] for CaretValueRule in CompositionEuHdrObligation, skipping rule (00:00.001 / 00:37.974, 152Mb) Sushi: File: /scratch/repo/input/fsh/rulesSet/rulesSet-common.fsh (00:00.000 / 00:37.974, 152Mb) Sushi: Line: 124 (00:00.000 / 00:37.974, 152Mb) Sushi: Applied in File: /scratch/repo/input/fsh/obligations/composition-hdr.fsh (00:00.000 / 00:37.975, 152Mb) Sushi: Applied on Line: 10 - 11 (00:00.000 / 00:37.975, 152Mb) Sushi: error No element found at path extension[presentedForm] for CaretValueRule in CompositionEuHdrObligation, skipping rule (00:00.001 / 00:37.977, 152Mb) Sushi: File: /scratch/repo/input/fsh/rulesSet/rulesSet-common.fsh (00:00.000 / 00:37.977, 152Mb) Sushi: Line: 125 (00:00.000 / 00:37.977, 152Mb) Sushi: Applied in File: /scratch/repo/input/fsh/obligations/composition-hdr.fsh (00:00.000 / 00:37.977, 152Mb) Sushi: Applied on Line: 10 - 11 (00:00.000 / 00:37.977, 152Mb) Sushi: error No definition for the type "BodyStructureEu" could be found. (00:04.804 / 00:42.782, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/condition-hdr.fsh (00:00.000 / 00:42.783, 152Mb) Sushi: Line: 11 (00:00.000 / 00:42.783, 152Mb) Sushi: error No definition for the type "LocationEu" could be found. (00:04.550 / 00:47.333, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/encounter-hdr.fsh (00:00.000 / 00:47.334, 152Mb) Sushi: Line: 77 (00:00.000 / 00:47.334, 152Mb) Sushi: error No definition for the type "LocationEu" could be found. (00:00.018 / 00:47.352, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/encounter-hdr.fsh (00:00.000 / 00:47.353, 152Mb) Sushi: Line: 81 (00:00.000 / 00:47.353, 152Mb) Sushi: error No definition for the type "LocationEu" could be found. (00:03.673 / 00:51.026, 152Mb) Sushi: File: /scratch/repo/input/fsh/profiles/immunization-hdr.fsh (00:00.000 / 00:51.026, 152Mb) Sushi: Line: 59 (00:00.000 / 00:51.027, 152Mb) Sushi: info Converted 63 FHIR StructureDefinitions. (00:15.330 / 01:06.357, 152Mb) Sushi: info Converted 1 FHIR CodeSystems. (00:00.024 / 01:06.382, 152Mb) Sushi: info Converted 17 FHIR ValueSets. (00:01.429 / 01:07.811, 152Mb) Sushi: info Converted 89 FHIR instances. (00:16.308 / 01:24.120, 152Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.001 / 01:24.121, 152Mb) Sushi: info Exported 129 FHIR resources as JSON. (00:00.734 / 01:24.855, 152Mb) Sushi: info Assembling Implementation Guide sources... (00:00.004 / 01:24.860, 152Mb) Sushi: info Generated ImplementationGuide-hl7.fhir.eu.hdr.json (00:00.057 / 01:24.917, 152Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 01:24.918, 152Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 01:24.919, 152Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:24.920, 152Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 01:24.920, 152Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 01:24.920, 152Mb) Sushi: | | 48 | 1 | 14 | 0 | | (00:00.000 / 01:24.920, 152Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:24.920, 152Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:24.920, 152Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 01:24.920, 152Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 01:24.921, 152Mb) Sushi: | | 17 | 1 | 89 | | (00:00.000 / 01:24.921, 152Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 01:24.921, 152Mb) Sushi: | | (00:00.000 / 01:24.921, 152Mb) Sushi: =================================================================== (00:00.000 / 01:24.921, 152Mb) Sushi: | That was a shipwreck! 17 Errors 0 Warnings | (00:00.000 / 01:24.921, 152Mb) Sushi: =================================================================== (00:00.000 / 01:24.921, 152Mb) Sushi couldn't be run. Complete output from running Sushi : (00:00.038 / 01:24.960, 152Mb) Note: Check that Sushi is installed correctly ("npm install -g fsh-sushi". On windows, get npm from https://www.npmjs.com/get-npm) (00:00.000 / 01:24.960, 152Mb) Exception: Process exited with an error: 17 (Exit value: 17) (00:00.000 / 01:24.961, 152Mb) Publishing Content Failed: Process exited with an error: 17 (Exit value: 17) (00:00.000 / 01:24.961, 152Mb) (00:00.000 / 01:24.961, 152Mb) Use -? to get command line help (00:00.000 / 01:24.961, 152Mb) (00:00.000 / 01:24.961, 152Mb) Stack Dump (for debugging): (00:00.000 / 01:24.961, 152Mb) org.apache.commons.exec.ExecuteException: Process exited with an error: 17 (Exit value: 17) at org.apache.commons.exec.DefaultExecutor.executeInternal(DefaultExecutor.java:404) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:166) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:153) at org.hl7.fhir.igtools.publisher.FSHRunner.runFsh(FSHRunner.java:89) at org.hl7.fhir.igtools.publisher.PublisherIGLoader.initialize(PublisherIGLoader.java:147) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:208) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:1487)