FLUTE Cross-border Prostate Cancer Data Standard Guide
0.1.0 - ci-build
Funded by the European Union

FLUTE Cross-border Prostate Cancer Data Standard Guide, published by Flute Project. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/hl7-eu/flute/ and changes regularly. See the Directory of published versions

: Study variables Model to FHIR R4 Map - JSON Representation

Draft as of 2023-12-06

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{
  "resourceType" : "ConceptMap",
  "id" : "CM-StudyVariables2FHIR",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ConceptMap CM-StudyVariables2FHIR</b></p><a name=\"CM-StudyVariables2FHIR\"> </a><a name=\"hcCM-StudyVariables2FHIR\"> </a><a name=\"CM-StudyVariables2FHIR-en-US\"> </a><p>Mapping from <a href=\"StructureDefinition-StudyVariables.html\">Prostate Cancer study Variables</a> to http://hl7.org/fhir/r4</p><br/><p><b>Group 1 </b>Mapping from <a href=\"StructureDefinition-StudyVariables.html\">Prostate Cancer study Variables</a> to <a href=\"StructureDefinition-PR-Biopsy.html\">Procedure: biopsy</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>StudyVariables.typeOfBiopsy (Type of biopsy)</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td>Procedure.code</td></tr><tr><td>StudyVariables.ageAtBiopsy (Age at Biopsy)</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equal\" title=\"equal\">is equal to</a></td><td>Procedure.performedAge</td></tr></table><hr/><p><b>Group 2 </b>Mapping from <a href=\"StructureDefinition-StudyVariables.html\">Prostate Cancer study Variables</a> to <a href=\"StructureDefinition-PR-ProstateCancerFamilyHistory.html\">FamilyMemberHistory: prostate cancer family history</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>StudyVariables.pcaFamilyHistory (PCa family history)</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equivalent\" title=\"equivalent\">is equivalent to</a></td><td>FamilyMemberHistory.condition.code</td></tr></table><hr/><p><b>Group 3 </b>Mapping from <a href=\"StructureDefinition-StudyVariables.html\">Prostate Cancer study Variables</a> to <a href=\"StructureDefinition-PR-ProstateSpecificAntigen.html\">Observation: prostate specific antigen</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>StudyVariables.psa (PSA)</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equal\" title=\"equal\">is equal to</a></td><td>Observation.valueQuantity</td></tr></table><hr/><p><b>Group 4 </b>Mapping from <a href=\"StructureDefinition-StudyVariables.html\">Prostate Cancer study Variables</a> to <a href=\"StructureDefinition-PR-DigitalRectalExamination.html\">Procedure: DRE</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>StudyVariables.dre (Rectal examination)</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td>Procedure.outcome</td></tr></table><hr/><p><b>Group 5 </b>Mapping from <a href=\"StructureDefinition-StudyVariables.html\">Prostate Cancer study Variables</a> to <a href=\"StructureDefinition-PR-ProstateVolume.html\">Observation: prostate volume</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>StudyVariables.prostateVolume (MRI_prostate volume)</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#equal\" title=\"equal\">is equal to</a></td><td>Observation.valueQuantity</td></tr></table><hr/><p><b>Group 6 </b>Mapping from <a href=\"StructureDefinition-StudyVariables.html\">Prostate Cancer study Variables</a> to <a href=\"StructureDefinition-PR-PIRADSScore.html\">Observation: PI-RADS</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td></tr><tr><td>StudyVariables.pirads (PI-RADS)</td><td><a href=\"http://hl7.org/fhir/extensions/5.1.0/CodeSystem-concept-map-equivalence.html#relatedto\" title=\"relatedto\">is related to</a></td><td>Observation.valueCodeableConcept</td></tr></table></div>"
  },
  "url" : "http://hl7.eu/fhir/ig/flute/ConceptMap/CM-StudyVariables2FHIR",
  "version" : "0.1.0",
  "name" : "StudyVariables2FHIR",
  "title" : "Study variables Model to FHIR R4 Map",
  "status" : "draft",
  "experimental" : true,
  "date" : "2023-12-06T12:26:32+00:00",
  "publisher" : "Flute Project",
  "contact" : [
    {
      "name" : "Flute Project",
      "telecom" : [
        {
          "system" : "url",
          "value" : "https://www.fluteproject.eu/"
        }
      ]
    },
    {
      "name" : "Flute Project",
      "telecom" : [
        {
          "system" : "url",
          "value" : "https://www.fluteproject.eu/"
        }
      ]
    }
  ],
  "description" : "Study variables Model to this guide Map",
  "purpose" : "It shows how the Study variables model is mapped into this guide",
  "sourceUri" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/StudyVariables",
  "targetUri" : "http://hl7.org/fhir/r4",
  "group" : [
    {
      "source" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/StudyVariables",
      "target" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-Biopsy",
      "element" : [
        {
          "code" : "StudyVariables.typeOfBiopsy",
          "display" : "Type of biopsy",
          "target" : [
            {
              "code" : "Procedure.code",
              "equivalence" : "relatedto"
            }
          ]
        },
        {
          "code" : "StudyVariables.ageAtBiopsy",
          "display" : "Age at Biopsy",
          "target" : [
            {
              "code" : "Procedure.performedAge",
              "equivalence" : "equal"
            }
          ]
        }
      ]
    },
    {
      "source" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/StudyVariables",
      "target" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateCancerFamilyHistory",
      "element" : [
        {
          "code" : "StudyVariables.pcaFamilyHistory",
          "display" : "PCa family history",
          "target" : [
            {
              "code" : "FamilyMemberHistory.condition.code",
              "equivalence" : "equivalent"
            }
          ]
        }
      ]
    },
    {
      "source" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/StudyVariables",
      "target" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateSpecificAntigen",
      "element" : [
        {
          "code" : "StudyVariables.psa",
          "display" : "PSA",
          "target" : [
            {
              "code" : "Observation.valueQuantity",
              "equivalence" : "equal"
            }
          ]
        }
      ]
    },
    {
      "source" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/StudyVariables",
      "target" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-DigitalRectalExamination",
      "element" : [
        {
          "code" : "StudyVariables.dre",
          "display" : "Rectal examination",
          "target" : [
            {
              "code" : "Procedure.outcome",
              "equivalence" : "relatedto"
            }
          ]
        }
      ]
    },
    {
      "source" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/StudyVariables",
      "target" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-ProstateVolume",
      "element" : [
        {
          "code" : "StudyVariables.prostateVolume",
          "display" : "MRI_prostate volume",
          "target" : [
            {
              "code" : "Observation.valueQuantity",
              "equivalence" : "equal"
            }
          ]
        }
      ]
    },
    {
      "source" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/StudyVariables",
      "target" : "http://hl7.eu/fhir/ig/flute/StructureDefinition/PR-PIRADSScore",
      "element" : [
        {
          "code" : "StudyVariables.pirads",
          "display" : "PI-RADS",
          "target" : [
            {
              "code" : "Observation.valueCodeableConcept",
              "equivalence" : "relatedto"
            }
          ]
        }
      ]
    }
  ]
}