New Zealand Health Terminology Service (NZHTS) Implementation Guide
0.1.0 - ci-build

New Zealand Health Terminology Service (NZHTS) Implementation Guide, published by Health New Zealand | Te Whatu Ora. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/daniel-thomson/nzhts/ and changes regularly. See the Directory of published versions

ValueSet: NZ WHO brain primary histology

Official URL: https://nzhts.digital.health.nz/fhir/ValueSet/canshare-who-brain-primary-histology Version: 0.1.0
Active as of 2024-11-11 Computable Name: canshare-who-brain-primary-histology
Other Identifiers: http://canshare.co.nz/fhir/NamingSystem/valuesets#canshare-who-brain-primary-histology

Histologies used for brain primaries, from WHO Classification of Tumours, Central Nervous System Tumours (latest edition) - 2. Gliomas, glioneuronal tumours, and neuronal tumours, 3. Choroid plexus tumours, 4. Embyronal tumours, 5. Pineal tumours, 7. Meningioma, 8. Mesenchymal, non-meningothelial tumours involving the CNS, 9. Melanocytic tumours, 11. Germ cell tumours, 12. Tumours of the sellar region or an 'Other' value.

References

This value set is not used here; it may be used elsewhere (e.g. specifications and/or implementations that use this content)

Logical Definition (CLD)

Generated Narrative: ValueSet canshare-who-brain-primary-histology

version: 1; Last updated: 2024-11-05 17:15:19+1300; Language: en-x-sctlang-23162100-0210105

  • Include codes fromhttp://snomed.info/sct where constraint = ^ 396451000210107 |New Zealand WHO classification of tumours (5th edition) CNS glioma and glioneuronal and neuronal histology reference set| OR ^ 396461000210105 |New Zealand WHO classification of tumours (5th edition) CNS choroid plexus histology reference set| OR ^ 396471000210104 |New Zealand WHO classification of tumours (5th edition) CNS embryonal histology reference set| OR ^ 396481000210102 |New Zealand WHO classification of tumours (5th edition) CNS pineal histology reference set| OR ^ 396501000210105 |New Zealand WHO classification of tumours (5th edition) CNS meningioma histology reference set| OR ^ 396511000210107 |New Zealand WHO classification of tumours (5th edition) CNS mesenchymal and non-meningothelial histology reference set| OR ^ 396521000210102 |New Zealand WHO classification of tumours (5th edition) CNS melanocytic histology reference set| OR ^ 396541000210108 |New Zealand WHO classification of tumours (5th edition) CNS germ cell histology reference set| OR ^ 396551000210106 |New Zealand WHO classification of tumours (5th edition) CNS sellar region histology reference set| OR 74964007 |Other|

 

Expansion

Generated Narrative: ValueSet canshare-who-brain-primary-histology

version: 1; Last updated: 2024-11-05 17:15:19+1300; Language: en-x-sctlang-23162100-0210105

Expansion based on SNOMED CT 21000210109 edition 01-Oct 2024

This value set contains 136 concepts

CodeSystemDisplay - English (English, en)
  63449009http://snomed.info/sctAlveolar rhabdomyosarcoma
  1197356004http://snomed.info/sctAnaplastic large cell medulloblastoma
  295091000210106http://snomed.info/sctAnaplastic malignant meningioma
  450900009http://snomed.info/sctAngiocentric glioma
  24551003http://snomed.info/sctArteriovenous malformation
  397741000210102http://snomed.info/sctAstroblastoma, MN1-altered
  128904001http://snomed.info/sctAtypical choroid plexus papilloma
  128914005http://snomed.info/sctAtypical meningioma
  128792003http://snomed.info/sctAtypical teratoid/rhabdoid tumour
  1156641000http://snomed.info/sctBenign choroid plexus papilloma
  253053003http://snomed.info/sctBenign haemangioma
  1157019008http://snomed.info/sctBenign meningioma
  83343001http://snomed.info/sctCapillary haemangioma
  33377007http://snomed.info/sctCavernous haemangioma
  397941000210100http://snomed.info/sctCentral nervous system neuroblastoma forkhead box R2-activated
  397951000210102http://snomed.info/sctCentral nervous system tumour with BCOR internal tandem duplication
  128858006http://snomed.info/sctCentral neurocytoma
  734134003http://snomed.info/sctCerebellar liponeurocytoma
  1163016002http://snomed.info/sctChondrosarcoma
  128789002http://snomed.info/sctChordoid glioma
  50007008http://snomed.info/sctChordoma
  1156971005http://snomed.info/sctChoriocarcinoma
  88252006http://snomed.info/sctChoroid plexus carcinoma
  1186889001http://snomed.info/sctCIC-rearranged sarcoma
  699703008http://snomed.info/sctClassic medulloblastoma
  57606003http://snomed.info/sctClear cell meningioma
  128781004http://snomed.info/sctCraniopharyngioma, adamantinomatous
  128782006http://snomed.info/sctCraniopharyngioma, papillary
  397921000210106http://snomed.info/sctCribriform neuroepithelial tumour
  128776008http://snomed.info/sctDedifferentiated chondrosarcoma
  128787000http://snomed.info/sctDesmoplastic infantile astrocytoma
  32456001http://snomed.info/sctDesmoplastic medulloblastoma
  397961000210104http://snomed.info/sctDesmoplastic myxoid tumour of pineal region, SMARCB1-mutant
  396821000210100http://snomed.info/sctDiffuse astrocytoma MYB and/or MYBL1-altered
  397761000210101http://snomed.info/sctDiffuse glioneuronal tumour with oligodendroglioma-like features and nuclear clusters
  397361000210100http://snomed.info/sctDiffuse hemispheric glioma, H3 G34-mutant
  397821000210102http://snomed.info/sctDiffuse leptomeningeal glioneural tumour methylation class 1
  397831000210100http://snomed.info/sctDiffuse leptomeningeal glioneural tumour methylation class 2
  397811000210107http://snomed.info/sctDiffuse leptomeningeal glioneural tumour with 1q gain
  733123006http://snomed.info/sctDiffuse leptomeningeal glioneuronal neoplasm
  396981000210105http://snomed.info/sctDiffuse low-grade glioma BRAF p.V600E-mutant
  396961000210102http://snomed.info/sctDiffuse low-grade glioma FGFR1 tyrosine kinase domain-duplicated
  396971000210108http://snomed.info/sctDiffuse low-grade glioma FGFR1-mutant
  396841000210106http://snomed.info/sctDiffuse low-grade glioma mitogen-activated protein kinase pathway-altered
  397321000210107http://snomed.info/sctDiffuse midline glioma, epidermal growth factor receptor-mutant
  397311000210102http://snomed.info/sctDiffuse midline glioma, H3-wildtype with EZHIP overexpression
  733862004http://snomed.info/sctDiffuse midline glioma, point mutation K27M in histone H3
  397211000210106http://snomed.info/sctDiffuse midline glioma, point mutation K27M in histone H3.1 and/or H3.2
  397201000210109http://snomed.info/sctDiffuse midline glioma, point mutation K27M in histone H3.3
  397371000210106http://snomed.info/sctDiffuse paediatric-type high-grade glioma, H3-wildtype and IDH-wildtype
  128788005http://snomed.info/sctDysembryoplastic neuroepithelial tumour
  128791005http://snomed.info/sctDysplastic gangliocytoma of cerebellum (Lhermitte-Duclos)
  28047004http://snomed.info/sctEmbryonal carcinoma
  734093008http://snomed.info/sctEmbryonal neoplasm with multilayered rosettes
  277984002http://snomed.info/sctEmbryonal neuroepithelial tumour
  14269005http://snomed.info/sctEmbryonal rhabdomyosarcoma
  74409009http://snomed.info/sctEndodermal sinus tumour
  1186904005http://snomed.info/sctEpendymoma
  733837004http://snomed.info/sctEpithelioid glioblastoma
  76909002http://snomed.info/sctEwing's sarcoma
  716179006http://snomed.info/sctExtraventricular neurocytoma
  128919000http://snomed.info/sctGangliocytoma
  1162662003http://snomed.info/sctGanglioglioma
  115233005http://snomed.info/sctGerm cell neoplasm
  28307001http://snomed.info/sctGerminoma
  44529004http://snomed.info/sctGiant cell glioblastoma
  733889009http://snomed.info/sctGlioblastoma isocitrate dehydrogenase wildtype
  115240006http://snomed.info/sctGlioma
  396751000210102http://snomed.info/sctGlioneuronal tumour
  35262004http://snomed.info/sctGliosarcoma
  381231000210108http://snomed.info/sctGranular cell pituicytoma
  81201000http://snomed.info/sctHaemangioblastoma
  397731000210105http://snomed.info/sctHigh grade astrocytoma with piloid features
  396771000210105http://snomed.info/sctIDH-mutant diffuse astrocytoma grade 2
  396781000210107http://snomed.info/sctIDH-mutant diffuse astrocytoma grade 3
  396791000210109http://snomed.info/sctIDH-mutant diffuse astrocytoma grade 4
  398081000210105http://snomed.info/sctImmature teratoma
  397561000210106http://snomed.info/sctInfant-type hemispheric glioma
  398031000210106http://snomed.info/sctIntracranial mesenchymal tumour FET::CREB fusion-positive
  733842007http://snomed.info/sctIsocitrate dehydrogenase mutant diffuse astrocytoma
  789437003http://snomed.info/sctMalignant pituitary blastoma
  295271000210100http://snomed.info/sctMalignant teratoma with somatic-type malignancy
  398071000210108http://snomed.info/sctMature teratoma
  1156923005http://snomed.info/sctMedulloblastoma
  733902001http://snomed.info/sctMedulloblastoma with extensive nodularity
  128730009http://snomed.info/sctMeningeal melanocytoma
  398051000210100http://snomed.info/sctMeningeal melanocytosis
  726420002http://snomed.info/sctMeningeal melanoma
  128731008http://snomed.info/sctMeningeal melanomatosis
  127579001http://snomed.info/sctMeningeal neoplasm (morphology)
  398021000210109http://snomed.info/sctMeningioma grade 1
  399709001http://snomed.info/sctMeningioma, chordoid
  399469000http://snomed.info/sctMeningioma, rhabdoid
  56565002http://snomed.info/sctMesenchymal chondrosarcoma
  301571000210108http://snomed.info/sctMesenchymal neoplasm
  32844007http://snomed.info/sctMixed germ cell tumour
  397841000210108http://snomed.info/sctMultinodular and vacuolating neuronal tumour
  397781000210109http://snomed.info/sctMyxoid glioneuronal tumour
  1623000http://snomed.info/sctMyxopapillary ependymoma
  396761000210104http://snomed.info/sctNeuronal tumour
  396801000210108http://snomed.info/sctOligodendroglioma with IDH-mutant and 1p/19q-codeleted grade 2
  396811000210105http://snomed.info/sctOligodendroglioma with IDH-mutant and 1p/19q-codeleted grade 3
  734086009http://snomed.info/sctOligodendroglioma with isocitrate dehydrogenase mutant and 1p/19q-codeleted
  381241000210100http://snomed.info/sctOncocytic pituicytoma
  74964007http://snomed.info/sctOther
  450902001http://snomed.info/sctPapillary glioneuronal tumour
  128840000http://snomed.info/sctPapillary meningioma
  450899004http://snomed.info/sctPapillary tumour of the pineal region
  128854008http://snomed.info/sctPilocytic astrocytoma
  397711000210103http://snomed.info/sctPilocytic astrocytoma with histological features of anaplasia
  388600004http://snomed.info/sctPilomyxoid astrocytoma
  397379005http://snomed.info/sctPineal parenchymal tumour of intermediate differentiation
  277987009http://snomed.info/sctPineal tumour morphology
  31671006http://snomed.info/sctPineoblastoma
  89096009http://snomed.info/sctPineocytoma
  450901008http://snomed.info/sctPituicytoma
  381221000210106http://snomed.info/sctPituitary neuroendocrine tumour
  77455004http://snomed.info/sctPleomorphic rhabdomyosarcoma
  78838008http://snomed.info/sctPleomorphic xanthoastrocytoma
  396831000210103http://snomed.info/sctPolymorphous low-grade neuroepithelial neoplasm of young
  397871000210103http://snomed.info/sctPosterior fossa ependymoma
  397881000210101http://snomed.info/sctPosterior fossa group A ependymoma
  397891000210104http://snomed.info/sctPosterior fossa group B ependymoma
  398041000210103http://snomed.info/sctPrimary intracranial sarcoma DICER1-mutant
  733868000http://snomed.info/sctRELA fusion-positive ependymoma
  30924005http://snomed.info/sctRhabdomyosarcoma
  733906003http://snomed.info/sctRosette-forming glioneuronal neoplasm
  128736003http://snomed.info/sctSolitary fibrous tumour
  397901000210103http://snomed.info/sctSpinal ependymoma
  397931000210108http://snomed.info/sctSpinal ependymoma, MYCN-amplified
  128749008http://snomed.info/sctSpindle cell rhabdomyosarcoma
  1586004http://snomed.info/sctSubependymal giant cell astrocytoma
  4553004http://snomed.info/sctSubependymal glioma
  397851000210106http://snomed.info/sctSupratentorial ependymoma
  397861000210109http://snomed.info/sctSupratentorial ependymoma, yes-associated protein 1 fusion-positive
  783806000http://snomed.info/sctVascular malformation

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code