SMART ICVP
0.1.0 - ci-build

SMART ICVP, published by WHO. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/WorldHealthOrganization/smart-icvp/ and changes regularly. See the Directory of published versions

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Draft as of 2024-11-20

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{
  "resourceType" : "StructureMap",
  "id" : "DVCLMToIPS",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: StructureMap DVCLMToIPS</b></p><a name=\"DVCLMToIPS\"> </a><a name=\"hcDVCLMToIPS\"> </a><a name=\"DVCLMToIPS-en-US\"> </a><pre class=\"fml\">\r\n<b>map</b><span style=\"color: navy\"> &quot;</span>http://smart.who.int/icvp/StructureMap/DVCLMToIPS<span style=\"color: navy\">&quot; = &quot;</span>DVCLMToIPS<span style=\"color: navy\">&quot;\r\n\r\n</span><b>uses</b><span style=\"color: navy\"> &quot;</span><a href=\"StructureDefinition-ModelDVC.html\" title=\"DVC\">http://smart.who.int/icvp/StructureDefinition/ModelDVC</a><span style=\"color: navy\">&quot; </span><b>alias </b>DVCLogicalModel <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> &quot;</span><a href=\"http://hl7.org/fhir/R4/bundle.html\" title=\"Bundle\">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style=\"color: navy\">&quot; </span><b>alias </b>IPS <b>as </b><b>target</b>\r\n\r\n<span style=\"color: navy\">// </span><span style=\"color: green\">create Bundle</span>\r\n<b>group </b>DVCLMToIPS<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>DVCLogicalModel, <b>target</b> <span style=\"color: maroon\">ips</span><span style=\"color: navy\"> : </span>IPS<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  lm<span style=\"color: navy\"><b> -&gt; </b></span>ips.type = <span style=\"color: blue\">'document'</span> <i>&quot;setIPSType&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">bid</span><span style=\"color: navy\">, </span> ips.identifier<b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\">, </span> id.value = <span style=\"color: maroon\">bid</span><span style=\"color: navy\">, </span> id.system = <span style=\"color: blue\">'urn:oid:2.16.724.4.8.10.200.10'</span> <i>&quot;setId&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">cid</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">mid</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">aid</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">proid</span><span style=\"color: navy\">, </span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">immid</span><b> then</b><span style=\"color: navy\"> {\r\n</span>    lm<span style=\"color: navy\"><b> -&gt; </b></span> ips.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Composition'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">composition</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">cid</span><span style=\"color: navy\">)</span><b> then</b><span style=\"color: navy\"> {\r\n</span>      lm<b> then </b>LmToComposition<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">ips</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">composition</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">cid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">mid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">aid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">proid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">immid</span><span style=\"color: navy\">)</span> <i>&quot;set LmToComposition&quot;</i><span style=\"color: navy\">;</span>\r\n      lm<span style=\"color: navy\"><b> -&gt; </b></span> ips.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Patient'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">patient</span><b> then</b><span style=\"color: navy\"> {\r\n</span>        lm<b> then </b>DemographicsToPatient<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">patient</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>&quot;createPatient&quot;</i><span style=\"color: navy\">;</span>\r\n        lm<span style=\"color: navy\"><b> -&gt; </b></span>entry.resource = <span style=\"color: maroon\">patient</span> <i>&quot;setPatientEntry&quot;</i><span style=\"color: navy\">;</span>\r\n      <span style=\"color: navy\">}</span> <i>&quot;mapPatientResource&quot;</i><span style=\"color: navy\">;</span>\r\n      lm.issuer<b> as </b><span style=\"color: maroon\">issuer</span><b> then</b><span style=\"color: navy\"> {\r\n</span>        issuer.reference<b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\"><b> -&gt; </b></span> ips.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Organization'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">organization</span><b> then</b><span style=\"color: navy\"> {\r\n</span>          lm<span style=\"color: navy\"><b> -&gt; </b></span>organization<b> then </b>createAuthor<span style=\"color: navy\">(</span><span style=\"color: maroon\">issuer</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">organization</span><span style=\"color: navy\">)</span> <i>&quot;createOrganization&quot;</i><span style=\"color: navy\">;</span>\r\n          lm<span style=\"color: navy\"><b> -&gt; </b></span>entry.resource = <span style=\"color: maroon\">organization</span> <i>&quot;setOrganizationEntry&quot;</i><span style=\"color: navy\">;</span>\r\n        <span style=\"color: navy\">}</span> <i>&quot;mapOrganizationResource&quot;</i><span style=\"color: navy\">;</span>\r\n      <span style=\"color: navy\">}</span> <i>&quot;ss&quot;</i><span style=\"color: navy\">;</span>\r\n    <span style=\"color: navy\">}</span> <i>&quot;mapCompositionResource&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: navy\">}</span> <i>&quot;setEntries&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">create Composition</span>\r\n<b>group </b>LmToComposition<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>DVCLogicalModel, <b>target</b> <span style=\"color: maroon\">ips</span><span style=\"color: navy\"> : </span>Bundle, <b>target</b> <span style=\"color: maroon\">composition</span><span style=\"color: navy\"> : </span>Composition, <b>source</b> <span style=\"color: maroon\">cid</span>, <b>source</b> <span style=\"color: maroon\">pid</span>, <b>source</b> <span style=\"color: maroon\">mid</span>, <b>source</b> <span style=\"color: maroon\">aid</span>, <b>source</b> <span style=\"color: maroon\">proid</span>, <b>source</b> <span style=\"color: maroon\">immid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  cid<span style=\"color: navy\"><b> -&gt; </b></span>composition.id = <span style=\"color: maroon\">cid</span> <i>&quot;setCid&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>composition.status = <span style=\"color: blue\">'final'</span> <i>&quot;setStatus&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>composition.title = <span style=\"color: blue\">'International Patient Summary'</span> <i>&quot;setTitle&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'60591-5'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://loinc.org'</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> composition.type = <span style=\"color: maroon\">code</span> <i>&quot;setType&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>composition.subject<b> as </b><span style=\"color: maroon\">subject</span><b> then</b><span style=\"color: navy\"> {\r\n</span>    lm<span style=\"color: navy\"><b> -&gt; </b></span>subject.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>&quot;setSubject&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: navy\">}</span> <i>&quot;setSubject&quot;</i><span style=\"color: navy\">;</span>\r\n  lm.issuer<b> as </b><span style=\"color: maroon\">issuer</span><b> then</b><span style=\"color: navy\"> {\r\n</span>    issuer.reference<b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\"><b> -&gt; </b></span>composition.author<b> as </b><span style=\"color: maroon\">author</span><b> then</b><span style=\"color: navy\"> {\r\n</span>      id<span style=\"color: navy\"><b> -&gt; </b></span>author.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span> <i>&quot;setAuthor&quot;</i><span style=\"color: navy\">;</span>\r\n    <span style=\"color: navy\">}</span> <i>&quot;setauthr&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: navy\">}</span> <i>&quot;setid&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>composition.section<b> as </b><span style=\"color: maroon\">medication</span><b> then </b>createSectionMedications<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">medication</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">mid</span><span style=\"color: navy\">)</span> <i>&quot;createMedication&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>composition.section<b> as </b><span style=\"color: maroon\">allergies</span><b> then </b>createSectionAllergies<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">allergies</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">aid</span><span style=\"color: navy\">)</span> <i>&quot;createAllergies&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>composition.section<b> as </b><span style=\"color: maroon\">problems</span><b> then </b>createSectionProblems<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">problems</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">proid</span><span style=\"color: navy\">)</span> <i>&quot;createProblems&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<b> then </b>createSectionImmunizations<span style=\"color: navy\">(</span><span style=\"color: maroon\">lm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">ips</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">composition</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">immid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>&quot;createImmunizations&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">create Patient</span>\r\n<b>group </b>DemographicsToPatient<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>DVCLogicalModel, <b>target</b> <span style=\"color: maroon\">patient</span><span style=\"color: navy\"> : </span>Patient, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  pid<span style=\"color: navy\"><b> -&gt; </b></span>patient.id = <span style=\"color: maroon\">pid</span> <i>&quot;setPatientId&quot;</i><span style=\"color: navy\">;</span>\r\n  lm.name<b> as </b><span style=\"color: maroon\">sourceName</span><span style=\"color: navy\"><b> -&gt; </b></span>patient.name<b> as </b><span style=\"color: maroon\">targetName</span><b> then </b>nameToHumanName<span style=\"color: navy\">(</span><span style=\"color: maroon\">sourceName</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">targetName</span><span style=\"color: navy\">)</span> <i>&quot;Setname&quot;</i><span style=\"color: navy\">;</span>\r\n  lm.dob<b> as </b><span style=\"color: maroon\">dob</span><span style=\"color: navy\"><b> -&gt; </b></span>patient.birthDate = <span style=\"color: maroon\">dob</span> <i>&quot;setDateofBirth&quot;</i><span style=\"color: navy\">;</span>\r\n  lm.sex<b> as </b><span style=\"color: maroon\">sex</span><b> then </b>ExtractGender<span style=\"color: navy\">(</span><span style=\"color: maroon\">sex</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">patient</span><span style=\"color: navy\">)</span> <i>&quot;Patient Gender&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: #b36b00\" title=\"This element was not defined prior to R5\">// lm.sex as sex -&gt; patient.gender = sex &quot;setSex&quot;;</span>\r\n  lm.nid<b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\"><b> -&gt; </b></span> patient.identifier<b> as </b><span style=\"color: maroon\">identifier</span><span style=\"color: navy\">, </span> identifier.value = <span style=\"color: maroon\">id</span> <i>&quot;setNationalIdentifier&quot;</i><span style=\"color: navy\">;</span>\r\n  lm.guardian<b> as </b><span style=\"color: maroon\">guardian</span><span style=\"color: navy\"><b> -&gt; </b></span> patient.contact<b> as </b><span style=\"color: maroon\">parentContact</span><span style=\"color: navy\">, </span> parentContact.name<b> as </b><span style=\"color: maroon\">parentName</span><b> then </b>nameToHumanName<span style=\"color: navy\">(</span><span style=\"color: maroon\">guardian</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">parentName</span><span style=\"color: navy\">)</span> <i>&quot;setGuardianName&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">deals with short and case sensitive codes</span>\r\n<b>group </b>ExtractGender<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">sex</span>, <b>target</b> <span style=\"color: maroon\">patient</span><span style=\"color: navy\"> : </span>Patient<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  sex<b> where </b>(sex = 'M')<span style=\"color: navy\"><b> -&gt; </b></span>patient.gender = <span style=\"color: blue\">'male'</span> <i>&quot;set male&quot;</i><span style=\"color: navy\">;</span>\r\n  sex<b> where </b>(sex = 'F')<span style=\"color: navy\"><b> -&gt; </b></span>patient.gender = <span style=\"color: blue\">'female'</span> <i>&quot;set female&quot;</i><span style=\"color: navy\">;</span>\r\n  sex<b> where </b>(sex = 'm')<span style=\"color: navy\"><b> -&gt; </b></span>patient.gender = <span style=\"color: blue\">'male'</span> <i>&quot;set male&quot;</i><span style=\"color: navy\">;</span>\r\n  sex<b> where </b>(sex = 'f')<span style=\"color: navy\"><b> -&gt; </b></span>patient.gender = <span style=\"color: blue\">'female'</span> <i>&quot;set female&quot;</i><span style=\"color: navy\">;</span>\r\n  sex<b> where </b>(sex = 'Male')<span style=\"color: navy\"><b> -&gt; </b></span>patient.gender = <span style=\"color: blue\">'male'</span> <i>&quot;set male&quot;</i><span style=\"color: navy\">;</span>\r\n  sex<b> where </b>(sex = 'Female')<span style=\"color: navy\"><b> -&gt; </b></span>patient.gender = <span style=\"color: blue\">'female'</span> <i>&quot;set female&quot;</i><span style=\"color: navy\">;</span>\r\n  sex<b> where </b>(sex = 'male')<span style=\"color: navy\"><b> -&gt; </b></span>patient.gender = <span style=\"color: blue\">'male'</span> <i>&quot;set male&quot;</i><span style=\"color: navy\">;</span>\r\n  sex<b> where </b>(sex = 'female')<span style=\"color: navy\"><b> -&gt; </b></span>patient.gender = <span style=\"color: blue\">'female'</span> <i>&quot;set female&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">create author</span>\r\n<b>group </b>createAuthor<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">issuer</span>, <b>target</b> <span style=\"color: maroon\">org</span><span style=\"color: navy\"> : </span>Organization<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  issuer.reference<b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\"><b> -&gt; </b></span>org.id = <span style=\"color: maroon\">id</span> <i>&quot;setID&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">create sectionMedications</span>\r\n<b>group </b>createSectionMedications<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>DVCLogicalModel, <b>target</b> <span style=\"color: maroon\">med</span><span style=\"color: navy\"> : </span>BackboneElement, <b>source</b> <span style=\"color: maroon\">mid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  mid<span style=\"color: navy\"><b> -&gt; </b></span>med.id = <span style=\"color: maroon\">mid</span> <i>&quot;setmedicationid&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>med.title = <span style=\"color: blue\">'Medication Summary Section'</span> <i>&quot;setMedicationTitle&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>med.text<b> as </b><span style=\"color: maroon\">text</span><b> then </b>generateNarrativeText<span style=\"color: navy\">(</span><span style=\"color: maroon\">med</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">text</span><span style=\"color: navy\">)</span> <i>&quot;setText&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'10160-0'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://loinc.org'</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> med.code = <span style=\"color: maroon\">code</span> <i>&quot;setCode&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'unavailable'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://hl7.org/fhir/ValueSet/list-empty-reason'</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> med.emptyReason = <span style=\"color: maroon\">code</span> <i>&quot;setCode&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">create sectionAllergies</span>\r\n<b>group </b>createSectionAllergies<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>DVCLogicalModel, <b>target</b> <span style=\"color: maroon\">all</span><span style=\"color: navy\"> : </span>BackboneElement, <b>source</b> <span style=\"color: maroon\">aid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  aid<span style=\"color: navy\"><b> -&gt; </b></span>all.id = <span style=\"color: maroon\">aid</span> <i>&quot;setAllergyId&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>all.title = <span style=\"color: blue\">'Allergies Section'</span> <i>&quot;setAllergyTitle&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>all.text<b> as </b><span style=\"color: maroon\">text</span><b> then </b>generateNarrativeText<span style=\"color: navy\">(</span><span style=\"color: maroon\">all</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">text</span><span style=\"color: navy\">)</span> <i>&quot;setText&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'48765-2'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://loinc.org'</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> all.code = <span style=\"color: maroon\">code</span> <i>&quot;setCode&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'unavailable'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://hl7.org/fhir/ValueSet/list-empty-reason'</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> all.emptyReason = <span style=\"color: maroon\">code</span> <i>&quot;setCode&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">create sectionProblems</span>\r\n<b>group </b>createSectionProblems<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>DVCLogicalModel, <b>target</b> <span style=\"color: maroon\">prb</span><span style=\"color: navy\"> : </span>BackboneElement, <b>source</b> <span style=\"color: maroon\">proid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  proid<span style=\"color: navy\"><b> -&gt; </b></span>prb.id = <span style=\"color: maroon\">proid</span> <i>&quot;setProblemsId&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>prb.title = <span style=\"color: blue\">'Problems Section'</span> <i>&quot;setProblemTitle&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span>prb.text<b> as </b><span style=\"color: maroon\">text</span><b> then </b>generateNarrativeText<span style=\"color: navy\">(</span><span style=\"color: maroon\">prb</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">text</span><span style=\"color: navy\">)</span> <i>&quot;setText&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'11450-4'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://loinc.org'</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> prb.code = <span style=\"color: maroon\">code</span> <i>&quot;setCode&quot;</i><span style=\"color: navy\">;</span>\r\n  lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'unavailable'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://hl7.org/fhir/ValueSet/list-empty-reason'</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> prb.emptyReason = <span style=\"color: maroon\">code</span> <i>&quot;setCode&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">create sectionImmunizations</span>\r\n<b>group </b>createSectionImmunizations<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">lm</span><span style=\"color: navy\"> : </span>DVCLogicalModel, <b>target</b> <span style=\"color: maroon\">bundle</span><span style=\"color: navy\"> : </span>Bundle, <b>target</b> <span style=\"color: maroon\">composition</span><span style=\"color: navy\"> : </span>Composition, <b>source</b> <span style=\"color: maroon\">immid</span>, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  lm<span style=\"color: navy\"><b> -&gt; </b></span>composition.section<b> as </b><span style=\"color: maroon\">imm</span><b> then</b><span style=\"color: navy\"> {\r\n</span>    immid<span style=\"color: navy\"><b> -&gt; </b></span>imm.id = <span style=\"color: maroon\">immid</span> <i>&quot;setImmunizationsId&quot;</i><span style=\"color: navy\">;</span>\r\n    lm<span style=\"color: navy\"><b> -&gt; </b></span>imm.title = <span style=\"color: blue\">'Immunizations Section'</span> <i>&quot;setImmunizationTitle&quot;</i><span style=\"color: navy\">;</span>\r\n    lm<span style=\"color: navy\"><b> -&gt; </b></span>imm.text<b> as </b><span style=\"color: maroon\">text</span><b> then </b>generateNarrativeText<span style=\"color: navy\">(</span><span style=\"color: maroon\">imm</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">text</span><span style=\"color: navy\">)</span> <i>&quot;setText&quot;</i><span style=\"color: navy\">;</span>\r\n    lm<span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'11369-6'</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://loinc.org'</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> imm.code = <span style=\"color: maroon\">code</span> <i>&quot;setCode&quot;</i><span style=\"color: navy\">;</span>\r\n    lm.vaccineDetails<b> as </b><span style=\"color: maroon\">vax</span><span style=\"color: navy\"><b> -&gt; </b></span> <b>uuid</b><span style=\"color: navy\">(</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">id</span><span style=\"color: navy\">, </span> bundle.entry<b> as </b><span style=\"color: maroon\">entry</span><span style=\"color: navy\">, </span> entry.fullUrl = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> imm.entry<b> as </b><span style=\"color: maroon\">sectionEntry</span><span style=\"color: navy\">, </span> sectionEntry.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">id</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> entry.resource = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Immunization'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">immunization</span><span style=\"color: navy\">, </span> immunization.id = <span style=\"color: maroon\">id</span><b> then </b>createImmunizationResource<span style=\"color: navy\">(</span><span style=\"color: maroon\">vax</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">immunization</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>&quot;setImmz&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: navy\">}</span> <i>&quot;set&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>createImmunizationResource<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">vax</span><span style=\"color: navy\"> : </span>vaccineDetails, <b>target</b> <span style=\"color: maroon\">immunization</span><span style=\"color: navy\"> : </span>Immunization, <b>source</b> <span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  vax<span style=\"color: navy\"><b> -&gt; </b></span>immunization.status = <span style=\"color: blue\">'completed'</span> <i>&quot;setStatus&quot;</i><span style=\"color: navy\">;</span>\r\n  vax.vaccineClassification<b> as </b><span style=\"color: maroon\">vaccine</span><span style=\"color: navy\"><b> -&gt; </b></span>immunization.vaccineCode = <span style=\"color: maroon\">vaccine</span> <i>&quot;setvaccinecode&quot;</i><span style=\"color: navy\">;</span>\r\n  vax.date<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -&gt; </b></span>immunization.occurrence = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">date</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'T00:00:00.000Z'</span><span style=\"color: navy\">)</span> <i>&quot;setDate&quot;</i><span style=\"color: navy\">;</span>\r\n  vax.batchNo<b> as </b><span style=\"color: maroon\">batchNo</span><span style=\"color: navy\"><b> -&gt; </b></span>immunization.lotNumber = <span style=\"color: maroon\">batchNo</span> <i>&quot;setBatchNo&quot;</i><span style=\"color: navy\">;</span>\r\n  vax<span style=\"color: navy\"><b> -&gt; </b></span>immunization.protocolApplied<b> as </b><span style=\"color: maroon\">protocol</span><b> then</b><span style=\"color: navy\"> {\r\n</span>    vax.doseNumber<b> as </b><span style=\"color: maroon\">doseNo</span><b> then</b><span style=\"color: navy\"> {\r\n</span>      doseNo.coding<b> as </b><span style=\"color: maroon\">coding</span><b> then</b><span style=\"color: navy\"> {\r\n</span>        coding.code<b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\"><b> -&gt; </b></span>protocol.doseNumber = <span style=\"color: maroon\">code</span> <i>&quot;setDoseNo&quot;</i><span style=\"color: navy\">;</span>\r\n      <span style=\"color: navy\">}</span> <i>&quot;setDoseNo&quot;</i><span style=\"color: navy\">;</span>\r\n    <span style=\"color: navy\">}</span> <i>&quot;setDoseNo&quot;</i><span style=\"color: navy\">;</span>\r\n    vax.disease<b> as </b><span style=\"color: maroon\">disease</span><span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'CodeableConcept'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">code</span><span style=\"color: navy\">, </span> code.coding = <span style=\"color: maroon\">disease</span><span style=\"color: navy\">, </span> protocol.targetDisease = <span style=\"color: maroon\">code</span> <i>&quot;setTargetDisease&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: navy\">}</span> <i>&quot;setProtocolApplied&quot;</i><span style=\"color: navy\">;</span>\r\n  vax<span style=\"color: navy\"><b> -&gt; </b></span> immunization.patient<b> as </b><span style=\"color: maroon\">subject</span><span style=\"color: navy\">, </span> subject.reference = <b>append</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:uuid:'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">)</span> <i>&quot;setSubject&quot;</i><span style=\"color: navy\">;</span>\r\n  vax.manufacturerId<b> as </b><span style=\"color: maroon\">maId</span><span style=\"color: navy\"><b> -&gt; </b></span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Reference'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">maRef</span><span style=\"color: navy\">, </span> maRef.identifier = <span style=\"color: maroon\">maId</span><span style=\"color: navy\">, </span> immunization.manufacturer = <span style=\"color: maroon\">maRef</span> <i>&quot;set Manufacturer&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">helper function</span>\r\n<b>group </b>generateNarrativeText<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>Section, <b>target</b> <span style=\"color: maroon\">text</span><span style=\"color: navy\"> : </span>string<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  src<span style=\"color: navy\"><b> -&gt; </b></span>text.status = <span style=\"color: blue\">'empty'</span> <i>&quot;setstatus&quot;</i><span style=\"color: navy\">;</span>\r\n  src<span style=\"color: navy\"><b> -&gt; </b></span>text.div = <span style=\"color: blue\">'&lt;div xmlns=\\&quot;http://www.w3.org/1999/xhtml\\&quot;&gt;Narrative not available&lt;/div&gt;'</span> <i>&quot;setdiv&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>nameToHumanName<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">sourceName</span>, <b>target</b> <span style=\"color: maroon\">targetName</span><span style=\"color: navy\"> : </span>HumanName<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  sourceName<b> as </b><span style=\"color: maroon\">patientName</span><span style=\"color: navy\"><b> -&gt; </b></span>targetName.text = <span style=\"color: maroon\">patientName</span> <i>&quot;Patient Name&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>humanNameToHumanName<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">sourceName</span>, <b>target</b> <span style=\"color: maroon\">targetName</span><span style=\"color: navy\"> : </span>HumanName<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  sourceName.use<b> as </b><span style=\"color: maroon\">use</span><span style=\"color: navy\"><b> -&gt; </b></span>targetName.use = <span style=\"color: maroon\">use</span> <i>&quot;CopyUse&quot;</i><span style=\"color: navy\">;</span>\r\n  sourceName.text<b> as </b><span style=\"color: maroon\">text</span><span style=\"color: navy\"><b> -&gt; </b></span>targetName.text = <span style=\"color: maroon\">text</span> <i>&quot;CopyText&quot;</i><span style=\"color: navy\">;</span>\r\n  sourceName.family<b> as </b><span style=\"color: maroon\">family</span><span style=\"color: navy\"><b> -&gt; </b></span>targetName.family = <span style=\"color: maroon\">family</span> <i>&quot;CopyFamily&quot;</i><span style=\"color: navy\">;</span>\r\n  sourceName.given<b> as </b><span style=\"color: maroon\">given</span><span style=\"color: navy\"><b> -&gt; </b></span>targetName.given = <span style=\"color: maroon\">given</span> <i>&quot;CopyGiven&quot;</i><span style=\"color: navy\">;</span>\r\n  sourceName.prefix<b> as </b><span style=\"color: maroon\">prefix</span><span style=\"color: navy\"><b> -&gt; </b></span>targetName.prefix = <span style=\"color: maroon\">prefix</span> <i>&quot;CopyPrefix&quot;</i><span style=\"color: navy\">;</span>\r\n  sourceName.suffix<b> as </b><span style=\"color: maroon\">suffix</span><span style=\"color: navy\"><b> -&gt; </b></span>targetName.suffix = <span style=\"color: maroon\">suffix</span> <i>&quot;CopySuffix&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: navy\">// </span><span style=\"color: green\">Copy the period using the previously defined group function</span>\r\n  sourceName.period<b> as </b><span style=\"color: maroon\">sourcePeriod</span><span style=\"color: navy\"><b> -&gt; </b></span>targetName.period<b> as </b><span style=\"color: maroon\">targetPeriod</span><b> then</b><span style=\"color: navy\"> {\r\n</span>    sourcePeriod<b> then </b>periodToPeriod<span style=\"color: navy\">(</span><span style=\"color: maroon\">sourcePeriod</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">targetPeriod</span><span style=\"color: navy\">)</span> <i>&quot;CopyPeriod&quot;</i><span style=\"color: navy\">;</span>\r\n  <span style=\"color: navy\">}</span> <i>&quot;copyPeriod&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>periodToPeriod<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">sourcePeriod</span>, <b>target</b> <span style=\"color: maroon\">targetPeriod</span><span style=\"color: navy\"> : </span>Period<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span>  sourcePeriod.start<b> as </b><span style=\"color: maroon\">start</span><span style=\"color: navy\"><b> -&gt; </b></span>targetPeriod.start = <span style=\"color: maroon\">start</span> <i>&quot;set period start&quot;</i><span style=\"color: navy\">;</span>\r\n  sourcePeriod.end<b> as </b><span style=\"color: maroon\">end</span><span style=\"color: navy\"><b> -&gt; </b></span>targetPeriod.end = <span style=\"color: maroon\">end</span> <i>&quot;set period end&quot;</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
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