WHO Digital Documentation of COVID-19 Certificates (DDCC)
1.0.0 - CI Build
WHO Digital Documentation of COVID-19 Certificates (DDCC)
1.0.0 - CI Build
WHO Digital Documentation of COVID-19 Certificates (DDCC), published by WHO. This guide is not an authorized publication; it is the continuous build for version 1.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/WorldHealthOrganization/ddcc/ and changes regularly. See the Directory of published versions
| Draft as of 2024-10-17 |
{
"resourceType" : "StructureMap",
"id" : "CertICAOtoCoreDataSet",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: StructureMap CertICAOtoCoreDataSet</b></p><a name=\"CertICAOtoCoreDataSet\"> </a><a name=\"hcCertICAOtoCoreDataSet\"> </a><a name=\"CertICAOtoCoreDataSet-en-US\"> </a><pre class=\"fml\">\r\n<b>map</b><span style=\"color: navy\"> "</span>http://smart.who.int/ddcc/StructureMap/CertICAOtoCoreDataSet<span style=\"color: navy\">" = "</span>CertICAOtoCoreDataSet<span style=\"color: navy\">"\r\n\r\n</span><span style=\"color: navy\">// </span><span style=\"color: green\">Structure map transforming CertICAO logical model to bundle of Core Data Set logical model</span>\r\n\r\n<b>uses</b><span style=\"color: navy\"> "</span>http://smart.who.int/ddcc/StructureDefinition/CertICAOVDS<span style=\"color: navy\">" </span><b>alias </b>VDS <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R4/bundle.html\" title=\"Bundle\">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style=\"color: navy\">" </span><b>alias </b>DDCCBundle <b>as </b><b>target</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-DDCCCoreDataSet.html\" title=\"DDCC Core Data Set Logical Model\">http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSet</a><span style=\"color: navy\">" </span><b>alias </b>DDCC <b>as </b><b>target</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-DDCCCoreDataSetVS.html\" title=\"DDCC Core Data Set Logical Model for Vaccination Status\">http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetVS</a><span style=\"color: navy\">" </span><b>alias </b>DDCCVS <b>as </b><b>target</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-DDCCCoreDataSetTR.html\" title=\"DDCC Core Data Set Logical Model for Test Result\">http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR</a><span style=\"color: navy\">" </span><b>alias </b>DDCCTR <b>as </b><b>target</b>\r\n\r\n<b>group </b>CertICAOtoCoreDataSet<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>VDS, <b>target</b> <span style=\"color: maroon\">ddccBundle</span><span style=\"color: navy\"> : </span>DDCCBundle<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> src.data<b> as </b><span style=\"color: maroon\">data</span><b> then</b><span style=\"color: navy\"> {\r\n</span> data.msg<b> as </b><span style=\"color: maroon\">msg</span><b> then</b><span style=\"color: navy\"> {\r\n</span> msg.ve<b> as </b><span style=\"color: maroon\">ve</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ve.vd<b> as </b><span style=\"color: maroon\">vd</span><span style=\"color: navy\"><b> -> </b></span> ddccBundle.entry<b> as </b><span style=\"color: maroon\">outentry</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetVS'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">ddcc</span><b> then</b><span style=\"color: navy\"> {\r\n</span> data.hdr<b> as </b><span style=\"color: maroon\">hdr</span><span style=\"color: navy\"><b> -> </b></span>ddcc.certificate<b> as </b><span style=\"color: maroon\">certificate</span><b> then </b>VDStoCoreDataSetCertificate<span style=\"color: navy\">(</span><span style=\"color: maroon\">hdr</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">msg</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">certificate</span><span style=\"color: navy\">)</span> <i>"set certificate"</i><span style=\"color: navy\">;</span>\r\n msg.pid<b> as </b><span style=\"color: maroon\">pid</span><b> then </b>ExtractPatient<span style=\"color: navy\">(</span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">ddcc</span><span style=\"color: navy\">)</span> <i>"set patient"</i><span style=\"color: navy\">;</span>\r\n vd<span style=\"color: navy\"><b> -> </b></span>ddcc.vaccination<b> as </b><span style=\"color: maroon\">vaccination</span><b> then </b>ExtractVaccine<span style=\"color: navy\">(</span><span style=\"color: maroon\">ve</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">vd</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">vaccination</span><span style=\"color: navy\">)</span> <i>"set vaccination"</i><span style=\"color: navy\">;</span>\r\n vd<span style=\"color: navy\"><b> -> </b></span>outentry.resource = <span style=\"color: maroon\">ddcc</span> <i>"set outentry"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n msg.tr<b> as </b><span style=\"color: maroon\">tr</span><span style=\"color: navy\"><b> -> </b></span> ddccBundle.entry<b> as </b><span style=\"color: maroon\">outentry</span><span style=\"color: navy\">, </span> <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/StructureDefinition/DDCCCoreDataSetTR'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">ddcc</span><b> then</b><span style=\"color: navy\"> {\r\n</span> data.hdr<b> as </b><span style=\"color: maroon\">hdr</span><span style=\"color: navy\"><b> -> </b></span>ddcc.certificate<b> as </b><span style=\"color: maroon\">certificate</span><b> then </b>VDStoCoreDataSetCertificate<span style=\"color: navy\">(</span><span style=\"color: maroon\">hdr</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">msg</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">certificate</span><span style=\"color: navy\">)</span> <i>"set certificate"</i><span style=\"color: navy\">;</span>\r\n msg.pid<b> as </b><span style=\"color: maroon\">pid</span><b> then </b>ExtractPatient<span style=\"color: navy\">(</span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">ddcc</span><span style=\"color: navy\">)</span> <i>"set patient"</i><span style=\"color: navy\">;</span>\r\n msg.sp<b> as </b><span style=\"color: maroon\">sp</span><b> then</b><span style=\"color: navy\"> {\r\n</span> msg.dat<b> as </b><span style=\"color: maroon\">dat</span><span style=\"color: navy\"><b> -> </b></span>ddcc.test<b> as </b><span style=\"color: maroon\">test</span><b> then </b>ExtractTest<span style=\"color: navy\">(</span><span style=\"color: maroon\">sp</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">dat</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">tr</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">test</span><span style=\"color: navy\">)</span> <i>"set test"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n tr<span style=\"color: navy\"><b> -> </b></span>outentry.resource = <span style=\"color: maroon\">ddcc</span> <i>"set outentry"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>VDStoCoreDataSetCertificate<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">hdr</span>, <b>source</b> <span style=\"color: maroon\">msg</span>, <b>target</b> <span style=\"color: maroon\">certificate</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> hdr.v<b> as </b><span style=\"color: maroon\">v</span><span style=\"color: navy\"><b> -> </b></span>certificate.version = <span style=\"color: maroon\">v</span> <i>"set version"</i><span style=\"color: navy\">;</span>\r\n msg.uvci<b> as </b><span style=\"color: maroon\">uvci</span><span style=\"color: navy\"><b> -> </b></span> certificate.hcid<b> as </b><span style=\"color: maroon\">hcid</span><span style=\"color: navy\">, </span> hcid.value = <span style=\"color: maroon\">uvci</span> <i>"set hcid from uvci"</i><span style=\"color: navy\">;</span>\r\n msg.utci<b> as </b><span style=\"color: maroon\">utci</span><span style=\"color: navy\"><b> -> </b></span> certificate.hcid<b> as </b><span style=\"color: maroon\">hcid</span><span style=\"color: navy\">, </span> hcid.value = <span style=\"color: maroon\">utci</span> <i>"set hcid from utci"</i><span style=\"color: navy\">;</span>\r\n hdr.is<b> as </b><span style=\"color: maroon\">is</span><span style=\"color: navy\"><b> -> </b></span> certificate.issuer = <b>create</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'Reference'</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">issuer</span><span style=\"color: navy\">, </span> issuer.display = <span style=\"color: maroon\">is</span> <i>"set issuer"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>ExtractPatient<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">pid</span>, <b>target</b> <span style=\"color: maroon\">ddcc</span><span style=\"color: navy\"> : </span>DDCC<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> pid.n<b> as </b><span style=\"color: maroon\">name</span><span style=\"color: navy\"><b> -> </b></span>ddcc.name = <span style=\"color: maroon\">name</span> <i>"set name"</i><span style=\"color: navy\">;</span>\r\n pid.dob<b> as </b><span style=\"color: maroon\">birthDate</span><span style=\"color: navy\"><b> -> </b></span>ddcc.birthDate = <span style=\"color: maroon\">birthDate</span> <i>"set birthDate"</i><span style=\"color: navy\">;</span>\r\n pid.i<b> as </b><span style=\"color: maroon\">priorityIdentifier</span><span style=\"color: navy\"><b> -> </b></span> ddcc.identifier<b> as </b><span style=\"color: maroon\">identifier</span><span style=\"color: navy\">, </span> identifier.value = <span style=\"color: maroon\">priorityIdentifier</span> <i>"set priorityIdentifier"</i><span style=\"color: navy\">;</span>\r\n pid.dn<span style=\"color: navy\"><b> -> </b></span>ddcc.identifier<b> as </b><span style=\"color: maroon\">identifier</span><b> then </b>ExtractDocumentTypeNumber<span style=\"color: navy\">(</span><span style=\"color: maroon\">pid</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">identifier</span><span style=\"color: navy\">)</span> <i>"set Document Type Number"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>ExtractDocumentTypeNumber<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span>, <b>target</b> <span style=\"color: maroon\">identif</span><span style=\"color: navy\"> : </span>Identifier<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> src.dn<b> as </b><span style=\"color: maroon\">docNumber</span><span style=\"color: navy\"><b> -> </b></span>identif.value = <span style=\"color: maroon\">docNumber</span> <i>"set doc number"</i><span style=\"color: navy\">;</span>\r\n src.dt<b> as </b><span style=\"color: maroon\">docType</span><b> where </b>(docType = 'P')<span style=\"color: navy\"><b> -> </b></span>identif.system = <span style=\"color: blue\">'PPN'</span> <i>"set doc number P"</i><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">P – Passport (Doc 9303-4)</span>\r\n src.dt<b> as </b><span style=\"color: maroon\">docType</span><b> where </b>(docType = 'A')<span style=\"color: navy\"><b> -> </b></span>identif.system = <span style=\"color: blue\">'DL'</span> <i>"set doc number A"</i><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">A – ID Card (Doc 9303-5)</span>\r\n src.dt<b> as </b><span style=\"color: maroon\">docType</span><b> where </b>(docType = 'C')<span style=\"color: navy\"><b> -> </b></span>identif.system = <span style=\"color: blue\">'DL'</span> <i>"set doc number C"</i><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">C – ID Card (Doc 9303-5)</span>\r\n src.dt<b> as </b><span style=\"color: maroon\">docType</span><b> where </b>(docType = 'I')<span style=\"color: navy\"><b> -> </b></span>identif.system = <span style=\"color: blue\">'DL'</span> <i>"set doc number I"</i><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">I – ID Card Doc 9303-5)</span>\r\n src.dt<b> as </b><span style=\"color: maroon\">docType</span><b> where </b>(docType = 'AC')<span style=\"color: navy\"><b> -> </b></span>identif.system = <span style=\"color: blue\">'EN'</span> <i>"set doc number AC"</i><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">AC - Crew Member Certificate (Doc 9303-5)</span>\r\n src.dt<b> as </b><span style=\"color: maroon\">docType</span><b> where </b>(docType = 'V')<span style=\"color: navy\"><b> -> </b></span>identif.system = <span style=\"color: blue\">'ACSN'</span> <i>"set doc number V"</i><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">V – Visa (Doc 9303-7)</span>\r\n src.dt<b> as </b><span style=\"color: maroon\">docType</span><b> where </b>(docType = 'D')<span style=\"color: navy\"><b> -> </b></span>identif.system = <span style=\"color: blue\">'DL'</span> <i>"set doc number D"</i><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">D – Driving License (ISO18013-1)</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>ExtractVaccine<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">ve</span>, <b>source</b> <span style=\"color: maroon\">vd</span>, <b>target</b> <span style=\"color: maroon\">vaccination</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> ve.des<b> as </b><span style=\"color: maroon\">des</span><span style=\"color: navy\"><b> -> </b></span> vaccination.vaccine<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://id.who.int/icd11/mms'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">des</span> <i>"set vaccine"</i><span style=\"color: navy\">;</span>\r\n ve.nam<b> as </b><span style=\"color: maroon\">nam</span><span style=\"color: navy\"><b> -> </b></span> vaccination.brand<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">nam</span> <i>"set brand"</i><span style=\"color: navy\">;</span>\r\n ve.dis<b> as </b><span style=\"color: maroon\">dis</span><span style=\"color: navy\"><b> -> </b></span> vaccination.disease<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://id.who.int/icd11/mms'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">dis</span> <i>"set target disease"</i><span style=\"color: navy\">;</span>\r\n vd.dvc<b> as </b><span style=\"color: maroon\">dvc</span><span style=\"color: navy\"><b> -> </b></span>vaccination.date = <span style=\"color: maroon\">dvc</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n vd.seq<b> as </b><span style=\"color: maroon\">seq</span><span style=\"color: navy\"><b> -> </b></span>vaccination.dose = <span style=\"color: maroon\">seq</span> <i>"set dose"</i><span style=\"color: navy\">;</span>\r\n vd.dvn<b> as </b><span style=\"color: maroon\">dvn</span><span style=\"color: navy\"><b> -> </b></span>vaccination.nextDose = <span style=\"color: maroon\">dvn</span> <i>"set nextDose"</i><span style=\"color: navy\">;</span>\r\n vd.ctr<b> as </b><span style=\"color: maroon\">ctr</span><span style=\"color: navy\"><b> -> </b></span>vaccination.country<b> as </b><span style=\"color: maroon\">coding</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ctr<b> then </b>ExtractCountry<span style=\"color: navy\">(</span><span style=\"color: maroon\">ctr</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">)</span> <i>"set country"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n vd.adm<b> as </b><span style=\"color: maroon\">adm</span><span style=\"color: navy\"><b> -> </b></span>vaccination.centre = <span style=\"color: maroon\">adm</span> <i>"set centre"</i><span style=\"color: navy\">;</span>\r\n vd.lot<b> as </b><span style=\"color: maroon\">lot</span><span style=\"color: navy\"><b> -> </b></span>vaccination.lot = <span style=\"color: maroon\">lot</span> <i>"set lot"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>ExtractTest<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">sp</span>, <b>source</b> <span style=\"color: maroon\">dat</span>, <b>source</b> <span style=\"color: maroon\">tr</span>, <b>target</b> <span style=\"color: maroon\">test</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> tr<span style=\"color: navy\"><b> -> </b></span> test.pathogen<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'http://id.who.int/icd11/mms'</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: blue\">'XN109'</span> <i>"set pathogen"</i><span style=\"color: navy\">;</span>\r\n tr.tc<b> as </b><span style=\"color: maroon\">tc</span><b> then</b><span style=\"color: navy\"> {\r\n</span> tc<span style=\"color: navy\"><b> -> </b></span> test.type<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">tc</span> <i>"set default type"</i><span style=\"color: navy\">;</span>\r\n tc<span style=\"color: navy\"><b> -> </b></span><b>c</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/CodeSystem/lab-test-type-icao'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">tc</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coded</span><b> then</b><span style=\"color: navy\"> {\r\n</span> tc<b> where </b>coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-icao')<span style=\"color: navy\"><b> -> </b></span>test.type = <b>translate</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">coded</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'http://smart.who.int/ddcc/ConceptMap/lab-test-type-icao-to-icd11'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span> <i>"translate ICAO type"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"coding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n tr.m<b> as </b><span style=\"color: maroon\">m</span><b> then</b><span style=\"color: navy\"> {\r\n</span> m<span style=\"color: navy\"><b> -> </b></span> test.origin<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">m</span> <i>"set default origin"</i><span style=\"color: navy\">;</span>\r\n m<span style=\"color: navy\"><b> -> </b></span><b>c</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/CodeSystem/lab-test-sample-origin-icao'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">m</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coded</span><b> then</b><span style=\"color: navy\"> {\r\n</span> m<b> where </b>coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-sample-origin-icao')<span style=\"color: navy\"><b> -> </b></span>test.origin = <b>translate</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">coded</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'http://smart.who.int/ddcc/ConceptMap/lab-test-sample-origin-icao-to-icd11'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span> <i>"translate ICAO origin"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"coding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n dat.sc<b> as </b><span style=\"color: maroon\">date</span><span style=\"color: navy\"><b> -> </b></span>test.date = <span style=\"color: maroon\">date</span> <i>"set date"</i><span style=\"color: navy\">;</span>\r\n tr.r<b> as </b><span style=\"color: maroon\">r</span><b> then</b><span style=\"color: navy\"> {\r\n</span> r<span style=\"color: navy\"><b> -> </b></span> test.result<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">r</span> <i>"set default result"</i><span style=\"color: navy\">;</span>\r\n r<span style=\"color: navy\"><b> -> </b></span><b>c</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'http://smart.who.int/ddcc/CodeSystem/lab-test-qual-result-icao'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">r</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coded</span><b> then</b><span style=\"color: navy\"> {\r\n</span> r<b> where </b>coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-icao')<span style=\"color: navy\"><b> -> </b></span>test.result = <b>translate</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">coded</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-icao-to-icd11'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'Coding'</span><span style=\"color: navy\">)</span> <i>"translate ICAO result"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"coding"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n sp.spn<b> as </b><span style=\"color: maroon\">spn</span><span style=\"color: navy\"><b> -> </b></span> test.centre<b> as </b><span style=\"color: maroon\">coding</span><span style=\"color: navy\">, </span> coding.code = <span style=\"color: maroon\">spn</span> <i>"set centre"</i><span style=\"color: navy\">;</span>\r\n sp.ctr<b> as </b><span style=\"color: maroon\">ctr</span><span style=\"color: navy\"><b> -> </b></span>test.country<b> as </b><span style=\"color: maroon\">coding</span><b> then</b><span style=\"color: navy\"> {\r\n</span> ctr<b> then </b>ExtractCountry<span style=\"color: navy\">(</span><span style=\"color: maroon\">ctr</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">coding</span><span style=\"color: navy\">)</span> <i>"set country"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>ExtractCountry<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">country</span>, <b>target</b> <span style=\"color: maroon\">coding</span><span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> <span style=\"color: navy\">// </span><span style=\"color: green\">ICAO Doc 9303-1 country codes are a superset of ISO 3166 3 letter codes</span>\r\n country<span style=\"color: navy\"><b> -> </b></span>coding.code = <span style=\"color: maroon\">country</span> <i>"set default country"</i><span style=\"color: navy\">;</span>\r\n country<span style=\"color: navy\"><b> -> </b></span><b>c</b><span style=\"color: navy\">(</span><span style=\"color: blue\">'urn:iso:std:iso:3166'</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">country</span><span style=\"color: navy\">)</span><b> as </b><span style=\"color: maroon\">coded</span><b> then</b><span style=\"color: navy\"> {\r\n</span> country<b> where </b>coded.memberOf('http://hl7.org/fhir/ValueSet/iso3166-1-3')<span style=\"color: navy\"><b> -> </b></span> coding.code = <span style=\"color: maroon\">country</span><span style=\"color: navy\">, </span> coding.system = <span style=\"color: blue\">'urn:iso:std:iso:3166'</span> <i>"set country with system"</i><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"coded"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
},
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"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "system",
"transform" : "copy",
"parameter" : [
{
"valueString" : "http://id.who.int/icd11/mms"
}
]
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "dis"
}
]
}
]
},
{
"name" : "set date",
"source" : [
{
"context" : "vd",
"element" : "dvc",
"variable" : "dvc"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "date",
"transform" : "copy",
"parameter" : [
{
"valueId" : "dvc"
}
]
}
]
},
{
"name" : "set dose",
"source" : [
{
"context" : "vd",
"element" : "seq",
"variable" : "seq"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "dose",
"transform" : "copy",
"parameter" : [
{
"valueId" : "seq"
}
]
}
]
},
{
"name" : "set nextDose",
"source" : [
{
"context" : "vd",
"element" : "dvn",
"variable" : "dvn"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "nextDose",
"transform" : "copy",
"parameter" : [
{
"valueId" : "dvn"
}
]
}
]
},
{
"name" : "ctr",
"source" : [
{
"context" : "vd",
"element" : "ctr",
"variable" : "ctr"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "country",
"variable" : "coding"
}
],
"rule" : [
{
"name" : "set country",
"source" : [
{
"context" : "ctr"
}
],
"dependent" : [
{
"name" : "ExtractCountry",
"variable" : [
"ctr",
"coding"
]
}
]
}
]
},
{
"name" : "set centre",
"source" : [
{
"context" : "vd",
"element" : "adm",
"variable" : "adm"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "centre",
"transform" : "copy",
"parameter" : [
{
"valueId" : "adm"
}
]
}
]
},
{
"name" : "set lot",
"source" : [
{
"context" : "vd",
"element" : "lot",
"variable" : "lot"
}
],
"target" : [
{
"context" : "vaccination",
"contextType" : "variable",
"element" : "lot",
"transform" : "copy",
"parameter" : [
{
"valueId" : "lot"
}
]
}
]
}
]
},
{
"name" : "ExtractTest",
"typeMode" : "none",
"input" : [
{
"name" : "sp",
"mode" : "source"
},
{
"name" : "dat",
"mode" : "source"
},
{
"name" : "tr",
"mode" : "source"
},
{
"name" : "test",
"mode" : "target"
}
],
"rule" : [
{
"name" : "set pathogen",
"source" : [
{
"context" : "tr"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "pathogen",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "system",
"transform" : "copy",
"parameter" : [
{
"valueString" : "http://id.who.int/icd11/mms"
}
]
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueString" : "XN109"
}
]
}
]
},
{
"name" : "tc",
"source" : [
{
"context" : "tr",
"element" : "tc",
"variable" : "tc"
}
],
"rule" : [
{
"name" : "set default type",
"source" : [
{
"context" : "tc"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "type",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "tc"
}
]
}
]
},
{
"name" : "coding",
"source" : [
{
"context" : "tc"
}
],
"target" : [
{
"contextType" : "variable",
"variable" : "coded",
"transform" : "c",
"parameter" : [
{
"valueString" : "http://smart.who.int/ddcc/CodeSystem/lab-test-type-icao"
},
{
"valueId" : "tc"
}
]
}
],
"rule" : [
{
"name" : "translate ICAO type",
"source" : [
{
"context" : "tc",
"condition" : "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-type-icao')"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "type",
"transform" : "translate",
"parameter" : [
{
"valueId" : "coded"
},
{
"valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-type-icao-to-icd11"
},
{
"valueString" : "Coding"
}
]
}
]
}
]
}
]
},
{
"name" : "m",
"source" : [
{
"context" : "tr",
"element" : "m",
"variable" : "m"
}
],
"rule" : [
{
"name" : "set default origin",
"source" : [
{
"context" : "m"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "origin",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "m"
}
]
}
]
},
{
"name" : "coding",
"source" : [
{
"context" : "m"
}
],
"target" : [
{
"contextType" : "variable",
"variable" : "coded",
"transform" : "c",
"parameter" : [
{
"valueString" : "http://smart.who.int/ddcc/CodeSystem/lab-test-sample-origin-icao"
},
{
"valueId" : "m"
}
]
}
],
"rule" : [
{
"name" : "translate ICAO origin",
"source" : [
{
"context" : "m",
"condition" : "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-sample-origin-icao')"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "origin",
"transform" : "translate",
"parameter" : [
{
"valueId" : "coded"
},
{
"valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-sample-origin-icao-to-icd11"
},
{
"valueString" : "Coding"
}
]
}
]
}
]
}
]
},
{
"name" : "set date",
"source" : [
{
"context" : "dat",
"element" : "sc",
"variable" : "date"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "date",
"transform" : "copy",
"parameter" : [
{
"valueId" : "date"
}
]
}
]
},
{
"name" : "r",
"source" : [
{
"context" : "tr",
"element" : "r",
"variable" : "r"
}
],
"rule" : [
{
"name" : "set default result",
"source" : [
{
"context" : "r"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "result",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "r"
}
]
}
]
},
{
"name" : "coding",
"source" : [
{
"context" : "r"
}
],
"target" : [
{
"contextType" : "variable",
"variable" : "coded",
"transform" : "c",
"parameter" : [
{
"valueString" : "http://smart.who.int/ddcc/CodeSystem/lab-test-qual-result-icao"
},
{
"valueId" : "r"
}
]
}
],
"rule" : [
{
"name" : "translate ICAO result",
"source" : [
{
"context" : "r",
"condition" : "coded.memberOf('http://smart.who.int/ddcc/ValueSet/lab-test-qual-result-icao')"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "result",
"transform" : "translate",
"parameter" : [
{
"valueId" : "coded"
},
{
"valueString" : "http://smart.who.int/ddcc/ConceptMap/lab-test-qual-result-icao-to-icd11"
},
{
"valueString" : "Coding"
}
]
}
]
}
]
}
]
},
{
"name" : "set centre",
"source" : [
{
"context" : "sp",
"element" : "spn",
"variable" : "spn"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "centre",
"variable" : "coding"
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "spn"
}
]
}
]
},
{
"name" : "ctr",
"source" : [
{
"context" : "sp",
"element" : "ctr",
"variable" : "ctr"
}
],
"target" : [
{
"context" : "test",
"contextType" : "variable",
"element" : "country",
"variable" : "coding"
}
],
"rule" : [
{
"name" : "set country",
"source" : [
{
"context" : "ctr"
}
],
"dependent" : [
{
"name" : "ExtractCountry",
"variable" : [
"ctr",
"coding"
]
}
]
}
]
}
]
},
{
"name" : "ExtractCountry",
"typeMode" : "none",
"input" : [
{
"name" : "country",
"mode" : "source"
},
{
"name" : "coding",
"mode" : "target"
}
],
"rule" : [
{
"name" : "set default country",
"source" : [
{
"context" : "country"
}
],
"target" : [
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "country"
}
]
}
]
},
{
"name" : "coded",
"source" : [
{
"context" : "country"
}
],
"target" : [
{
"contextType" : "variable",
"variable" : "coded",
"transform" : "c",
"parameter" : [
{
"valueString" : "urn:iso:std:iso:3166"
},
{
"valueId" : "country"
}
]
}
],
"rule" : [
{
"name" : "set country with system",
"source" : [
{
"context" : "country",
"condition" : "coded.memberOf('http://hl7.org/fhir/ValueSet/iso3166-1-3')"
}
],
"target" : [
{
"context" : "coding",
"contextType" : "variable",
"element" : "code",
"transform" : "copy",
"parameter" : [
{
"valueId" : "country"
}
]
},
{
"context" : "coding",
"contextType" : "variable",
"element" : "system",
"transform" : "copy",
"parameter" : [
{
"valueString" : "urn:iso:std:iso:3166"
}
]
}
]
}
]
}
]
}
]
}