臺灣次世代基因定序檢測實作指引, published by 衛生福利部中央健康保險署. This guide is not an authorized publication; it is the continuous build for version 1.0.1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/TWNHIFHIR/ngs/ and changes regularly. See the Directory of published versions

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Resource Profile: ObservationTWNGS - Mappings

Mappings for the Observation-twngs resource profile.

Mappings to Structures in this Implementation Guide

Name	Mapping to TWNGS Observation
Observation
Observation / id
Observation / meta
Observation / implicitRules
Observation / language
Observation / text
Observation / contained
Observation / extension
Observation / modifierExtension
Observation / identifier
Observation / identifier / id
Observation / identifier / extension
Observation / identifier / use
Observation / identifier / type
Observation / identifier / system
Observation / identifier / value	ApplyModel.hosp.srialNum
Observation / identifier / period
Observation / identifier / assigner
Observation / basedOn
Observation / partOf
Observation / status
Observation / category
Observation / code
Observation / code / id
Observation / code / extension
Observation / code / coding
Observation / code / coding / id
Observation / code / coding / extension
Observation / code / coding / system
Observation / code / coding / version
Observation / code / coding / code
Observation / code / coding / display
Observation / code / coding / userSelected
Observation / code / text
Observation / subject
Observation / focus
Observation / encounter
Observation / effective[x]
Observation / issued
Observation / performer
Observation / value[x]
Observation / value[x] / id
Observation / value[x] / extension
Observation / value[x] / coding
Observation / value[x] / coding / id
Observation / value[x] / coding / extension
Observation / value[x] / coding / system
Observation / value[x] / coding / version
Observation / value[x] / coding / code
Observation / value[x] / coding / display
Observation / value[x] / coding / userSelected
Observation / value[x] / text
Observation / dataAbsentReason
Observation / interpretation
Observation / note
Observation / bodySite
Observation / method
Observation / specimen
Observation / device
Observation / referenceRange
Observation / referenceRange / id
Observation / referenceRange / extension
Observation / referenceRange / modifierExtension
Observation / referenceRange / low
Observation / referenceRange / high
Observation / referenceRange / type
Observation / referenceRange / appliesTo
Observation / referenceRange / age
Observation / referenceRange / text
Observation / hasMember
Observation / derivedFrom
Observation / Slices for component
Observation / Slices for component / component:All Slices
Observation / Slices for component / component:All Slices / id
Observation / Slices for component / component:All Slices / extension
Observation / Slices for component / component:All Slices / modifierExtension
Observation / Slices for component / component:All Slices / code
Observation / Slices for component / component:All Slices / value[x]
Observation / Slices for component / component:All Slices / dataAbsentReason
Observation / Slices for component / component:All Slices / interpretation	ApplyModel.gene.mutationType
Observation / Slices for component / component:All Slices / referenceRange
Observation / Slices for component / component:gene-test-code
Observation / Slices for component / component:gene-test-code / id
Observation / Slices for component / component:gene-test-code / extension
Observation / Slices for component / component:gene-test-code / modifierExtension
Observation / Slices for component / component:gene-test-code / code
Observation / Slices for component / component:gene-test-code / value[x]
Observation / Slices for component / component:gene-test-code / dataAbsentReason
Observation / Slices for component / component:gene-test-code / interpretation	ApplyModel.gene.mutationType
Observation / Slices for component / component:gene-test-code / interpretation / id
Observation / Slices for component / component:gene-test-code / interpretation / extension
Observation / Slices for component / component:gene-test-code / interpretation / coding
Observation / Slices for component / component:gene-test-code / interpretation / coding / id
Observation / Slices for component / component:gene-test-code / interpretation / coding / extension
Observation / Slices for component / component:gene-test-code / interpretation / coding / system
Observation / Slices for component / component:gene-test-code / interpretation / coding / version
Observation / Slices for component / component:gene-test-code / interpretation / coding / code
Observation / Slices for component / component:gene-test-code / interpretation / coding / display
Observation / Slices for component / component:gene-test-code / interpretation / coding / userSelected
Observation / Slices for component / component:gene-test-code / interpretation / text
Observation / Slices for component / component:gene-test-code / referenceRange
Observation / Slices for component / component:gene-list
Observation / Slices for component / component:gene-list / id
Observation / Slices for component / component:gene-list / extension
Observation / Slices for component / component:gene-list / modifierExtension
Observation / Slices for component / component:gene-list / code
Observation / Slices for component / component:gene-list / value[x]
Observation / Slices for component / component:gene-list / dataAbsentReason
Observation / Slices for component / component:gene-list / interpretation	ApplyModel.gene.mutationType
Observation / Slices for component / component:gene-list / referenceRange
Observation / Slices for component / component:representative-coding-hgvs
Observation / Slices for component / component:representative-coding-hgvs / id
Observation / Slices for component / component:representative-coding-hgvs / extension
Observation / Slices for component / component:representative-coding-hgvs / modifierExtension
Observation / Slices for component / component:representative-coding-hgvs / code
Observation / Slices for component / component:representative-coding-hgvs / value[x]
Observation / Slices for component / component:representative-coding-hgvs / dataAbsentReason
Observation / Slices for component / component:representative-coding-hgvs / interpretation	ApplyModel.gene.mutationType
Observation / Slices for component / component:representative-coding-hgvs / interpretation / id
Observation / Slices for component / component:representative-coding-hgvs / interpretation / extension
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / id
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / extension
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / system
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / version
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / code
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / display
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / userSelected
Observation / Slices for component / component:representative-coding-hgvs / interpretation / text
Observation / Slices for component / component:representative-coding-hgvs / referenceRange
Observation / Slices for component / component:genomic-hgvs
Observation / Slices for component / component:genomic-hgvs / id
Observation / Slices for component / component:genomic-hgvs / extension
Observation / Slices for component / component:genomic-hgvs / modifierExtension
Observation / Slices for component / component:genomic-hgvs / code
Observation / Slices for component / component:genomic-hgvs / value[x]
Observation / Slices for component / component:genomic-hgvs / dataAbsentReason
Observation / Slices for component / component:genomic-hgvs / interpretation	ApplyModel.gene.mutationType
Observation / Slices for component / component:genomic-hgvs / referenceRange
Observation / Slices for component / component:exact-start-end
Observation / Slices for component / component:exact-start-end / id
Observation / Slices for component / component:exact-start-end / extension
Observation / Slices for component / component:exact-start-end / modifierExtension
Observation / Slices for component / component:exact-start-end / code
Observation / Slices for component / component:exact-start-end / value[x]
Observation / Slices for component / component:exact-start-end / dataAbsentReason
Observation / Slices for component / component:exact-start-end / interpretation	ApplyModel.gene.mutationType
Observation / Slices for component / component:exact-start-end / referenceRange
Documentation for this format

Mappings to other Structures

No Mappings Found

Other Mappings

Name	Workflow Pattern	SNOMED CT Concept Domain Binding	HL7 v2 Mapping	RIM Mapping	FiveWs Pattern Mapping	SNOMED CT Attribute Binding
Observation	Event	< 363787002 |Observable entity|	OBX	Observation[classCode=OBS moodCode=EVN]
Observation / id
Observation / meta
Observation / implicitRules
Observation / language
Observation / text				Act.text?
Observation / contained				N/A
Observation / extension				N/A
Observation / modifierExtension				N/A
Observation / identifier	Event.identifier		1) OBR-3 + OBX-3 + OBX-4 or 2) OBR-3 + OBR-4 + OBX-3 + OBX-4 or 2) some other way to uniquely ID the OBR/ORC + OBX-3 + OBX-4.	id	FiveWs.identifier
Observation / identifier / id				n/a
Observation / identifier / extension				n/a
Observation / identifier / use			N/A	Role.code or implied by context
Observation / identifier / type			CX.5	Role.code or implied by context
Observation / identifier / system			CX.4 / EI-2-4	II.root or Role.id.root
Observation / identifier / value			CX.1 / EI.1	II.extension or II.root if system indicates OID or GUID (Or Role.id.extension or root)
Observation / identifier / period			CX.7 + CX.8	Role.effectiveTime or implied by context
Observation / identifier / assigner			CX.4 / (CX.4 CX.9 CX.10)	II.assigningAuthorityName but note that this is an improper use by the definition of the field. Also Role.scoper
Observation / basedOn	Event.basedOn		ORC	.inboundRelationship[typeCode=COMP].source[moodCode=EVN]
Observation / partOf	Event.partOf		Varies by domain	.outboundRelationship[typeCode=FLFS].target
Observation / status	Event.status	< 445584004 |Report by finality status|	OBX-11	status Amended & Final are differentiated by whether it is the subject of a ControlAct event with a type of "revise"	FiveWs.status
Observation / category				.outboundRelationship[typeCode="COMP].target[classCode="LIST" moodCode="EVN"].code	FiveWs.class
Observation / code	Event.code	< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|	OBX-3	code	FiveWs.what[x]	116680003 |Is a|
Observation / code / id				n/a
Observation / code / extension				n/a
Observation / code / coding			C*E.1-8 C*E.10-22	union(. ./translation)
Observation / code / coding / id				n/a
Observation / code / coding / extension				n/a
Observation / code / coding / system			C*E.3	./codeSystem
Observation / code / coding / version			C*E.7	./codeSystemVersion
Observation / code / coding / code			C*E.1	./code
Observation / code / coding / display			C*E.2 - but note this is not well followed	CV.displayName
Observation / code / coding / userSelected			Sometimes implied by being first	CD.codingRationale
Observation / code / text			C*E.9. But note many systems use C*E.2 for this	./originalText[mediaType/code="text/plain"]/data
Observation / subject	Event.subject		PID-3	participation[typeCode=RTGT]	FiveWs.subject
Observation / focus			OBX-3	participation[typeCode=SBJ]	FiveWs.subject
Observation / encounter	Event.context		PV1	inboundRelationship[typeCode=COMP].source[classCode=ENC moodCode=EVN]	FiveWs.context
Observation / effective[x]	Event.occurrence[x]		OBX-14 and/or OBX-19 after v2.4 (depends on who observation made)	effectiveTime	FiveWs.done[x]
Observation / issued			OBR.22 (or MSH.7) or perhaps OBX-19 (depends on who observation made)	participation[typeCode=AUT].time	FiveWs.recorded
Observation / performer	Event.performer.actor		OBX.15 / (Practitioner) OBX-16 PRT-4='RO' / (Device) OBX-18 PRT-4='EQUIP' / (Organization) OBX-23 PRT-4='PO'	participation[typeCode=PRF]	FiveWs.actor
Observation / value[x]		< 441742003 |Evaluation finding|	OBX.2 OBX.5 OBX.6	value		363714003 |Interprets|
Observation / value[x] / id				n/a
Observation / value[x] / extension				n/a
Observation / value[x] / coding			C*E.1-8 C*E.10-22	union(. ./translation)
Observation / value[x] / coding / id				n/a
Observation / value[x] / coding / extension				n/a
Observation / value[x] / coding / system			C*E.3	./codeSystem
Observation / value[x] / coding / version			C*E.7	./codeSystemVersion
Observation / value[x] / coding / code			C*E.1	./code
Observation / value[x] / coding / display			C*E.2 - but note this is not well followed	CV.displayName
Observation / value[x] / coding / userSelected			Sometimes implied by being first	CD.codingRationale
Observation / value[x] / text			C*E.9. But note many systems use C*E.2 for this	./originalText[mediaType/code="text/plain"]/data
Observation / dataAbsentReason			N/A	value.nullFlavor
Observation / interpretation		< 260245000 |Findings values|	OBX-8	interpretationCode		363713009 |Has interpretation|
Observation / note			NTE.3 (partner NTE to OBX or sometimes another (child?) OBX)	subjectOf.observationEvent[code="annotation"].value
Observation / bodySite		< 123037004 |Body structure|	OBX-20	targetSiteCode		718497002 |Inherent location|
Observation / method			OBX-17	methodCode
Observation / specimen		< 123038009 |Specimen|	SPM segment	participation[typeCode=SPC].specimen		704319004 |Inherent in|
Observation / device		< 49062001 |Device|	OBX-17 / PRT -10	participation[typeCode=DEV]		424226004 |Using device|
Observation / referenceRange			OBX.7	outboundRelationship[typeCode=REFV]/target[classCode=OBS moodCode=EVN]
Observation / referenceRange / id				n/a
Observation / referenceRange / extension				n/a
Observation / referenceRange / modifierExtension				N/A
Observation / referenceRange / low			OBX-7	IVL_PQ.low
Observation / referenceRange / high			OBX-7	IVL_PQ.high
Observation / referenceRange / type		< 260245000 |Findings values| OR < 365860008 |General clinical state finding| OR < 250171008 |Clinical history or observation findings| OR < 415229000 |Racial group| OR < 365400002 |Finding of puberty stage| OR < 443938003 |Procedure carried out on subject|	OBX-10	interpretationCode
Observation / referenceRange / appliesTo		< 260245000 |Findings values| OR < 365860008 |General clinical state finding| OR < 250171008 |Clinical history or observation findings| OR < 415229000 |Racial group| OR < 365400002 |Finding of puberty stage| OR < 443938003 |Procedure carried out on subject|	OBX-10	interpretationCode
Observation / referenceRange / age				outboundRelationship[typeCode=PRCN].targetObservationCriterion[code="age"].value
Observation / referenceRange / text			OBX-7	ST
Observation / hasMember			Relationships established by OBX-4 usage	outBoundRelationship
Observation / derivedFrom			Relationships established by OBX-4 usage	.targetObservation
Observation / Slices for component			containment by OBX-4?	outBoundRelationship[typeCode=COMP]
Observation / Slices for component / component:All Slices
Observation / Slices for component / component:All Slices / id				n/a
Observation / Slices for component / component:All Slices / extension				n/a
Observation / Slices for component / component:All Slices / modifierExtension				N/A
Observation / Slices for component / component:All Slices / code		< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|	OBX-3	code	FiveWs.what[x]
Observation / Slices for component / component:All Slices / value[x]		363714003 |Interprets| < 441742003 |Evaluation finding|	OBX.2 OBX.5 OBX.6	value		363714003 |Interprets|
Observation / Slices for component / component:All Slices / dataAbsentReason			N/A	value.nullFlavor
Observation / Slices for component / component:All Slices / interpretation		< 260245000 |Findings values|	OBX-8	interpretationCode		363713009 |Has interpretation|
Observation / Slices for component / component:All Slices / referenceRange			OBX.7	outboundRelationship[typeCode=REFV]/target[classCode=OBS moodCode=EVN]
Observation / Slices for component / component:gene-test-code			containment by OBX-4?	outBoundRelationship[typeCode=COMP]
Observation / Slices for component / component:gene-test-code / id				n/a
Observation / Slices for component / component:gene-test-code / extension				n/a
Observation / Slices for component / component:gene-test-code / modifierExtension				N/A
Observation / Slices for component / component:gene-test-code / code		< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|	OBX-3	code	FiveWs.what[x]
Observation / Slices for component / component:gene-test-code / value[x]		363714003 |Interprets| < 441742003 |Evaluation finding|	OBX.2 OBX.5 OBX.6	value		363714003 |Interprets|
Observation / Slices for component / component:gene-test-code / dataAbsentReason			N/A	value.nullFlavor
Observation / Slices for component / component:gene-test-code / interpretation		< 260245000 |Findings values|	OBX-8	interpretationCode		363713009 |Has interpretation|
Observation / Slices for component / component:gene-test-code / interpretation / id				n/a
Observation / Slices for component / component:gene-test-code / interpretation / extension				n/a
Observation / Slices for component / component:gene-test-code / interpretation / coding			C*E.1-8 C*E.10-22	union(. ./translation)
Observation / Slices for component / component:gene-test-code / interpretation / coding / id				n/a
Observation / Slices for component / component:gene-test-code / interpretation / coding / extension				n/a
Observation / Slices for component / component:gene-test-code / interpretation / coding / system			C*E.3	./codeSystem
Observation / Slices for component / component:gene-test-code / interpretation / coding / version			C*E.7	./codeSystemVersion
Observation / Slices for component / component:gene-test-code / interpretation / coding / code			C*E.1	./code
Observation / Slices for component / component:gene-test-code / interpretation / coding / display			C*E.2 - but note this is not well followed	CV.displayName
Observation / Slices for component / component:gene-test-code / interpretation / coding / userSelected			Sometimes implied by being first	CD.codingRationale
Observation / Slices for component / component:gene-test-code / interpretation / text			C*E.9. But note many systems use C*E.2 for this	./originalText[mediaType/code="text/plain"]/data
Observation / Slices for component / component:gene-test-code / referenceRange			OBX.7	outboundRelationship[typeCode=REFV]/target[classCode=OBS moodCode=EVN]
Observation / Slices for component / component:gene-list			containment by OBX-4?	outBoundRelationship[typeCode=COMP]
Observation / Slices for component / component:gene-list / id				n/a
Observation / Slices for component / component:gene-list / extension				n/a
Observation / Slices for component / component:gene-list / modifierExtension				N/A
Observation / Slices for component / component:gene-list / code		< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|	OBX-3	code	FiveWs.what[x]
Observation / Slices for component / component:gene-list / value[x]		363714003 |Interprets| < 441742003 |Evaluation finding|	OBX.2 OBX.5 OBX.6	value		363714003 |Interprets|
Observation / Slices for component / component:gene-list / dataAbsentReason			N/A	value.nullFlavor
Observation / Slices for component / component:gene-list / interpretation		< 260245000 |Findings values|	OBX-8	interpretationCode		363713009 |Has interpretation|
Observation / Slices for component / component:gene-list / referenceRange			OBX.7	outboundRelationship[typeCode=REFV]/target[classCode=OBS moodCode=EVN]
Observation / Slices for component / component:representative-coding-hgvs			containment by OBX-4?	outBoundRelationship[typeCode=COMP]
Observation / Slices for component / component:representative-coding-hgvs / id				n/a
Observation / Slices for component / component:representative-coding-hgvs / extension				n/a
Observation / Slices for component / component:representative-coding-hgvs / modifierExtension				N/A
Observation / Slices for component / component:representative-coding-hgvs / code		< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|	OBX-3	code	FiveWs.what[x]
Observation / Slices for component / component:representative-coding-hgvs / value[x]		363714003 |Interprets| < 441742003 |Evaluation finding|	OBX.2 OBX.5 OBX.6	value		363714003 |Interprets|
Observation / Slices for component / component:representative-coding-hgvs / dataAbsentReason			N/A	value.nullFlavor
Observation / Slices for component / component:representative-coding-hgvs / interpretation		< 260245000 |Findings values|	OBX-8	interpretationCode		363713009 |Has interpretation|
Observation / Slices for component / component:representative-coding-hgvs / interpretation / id				n/a
Observation / Slices for component / component:representative-coding-hgvs / interpretation / extension				n/a
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding			C*E.1-8 C*E.10-22	union(. ./translation)
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / id				n/a
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / extension				n/a
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / system			C*E.3	./codeSystem
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / version			C*E.7	./codeSystemVersion
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / code			C*E.1	./code
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / display			C*E.2 - but note this is not well followed	CV.displayName
Observation / Slices for component / component:representative-coding-hgvs / interpretation / coding / userSelected			Sometimes implied by being first	CD.codingRationale
Observation / Slices for component / component:representative-coding-hgvs / interpretation / text			C*E.9. But note many systems use C*E.2 for this	./originalText[mediaType/code="text/plain"]/data
Observation / Slices for component / component:representative-coding-hgvs / referenceRange			OBX.7	outboundRelationship[typeCode=REFV]/target[classCode=OBS moodCode=EVN]
Observation / Slices for component / component:genomic-hgvs			containment by OBX-4?	outBoundRelationship[typeCode=COMP]
Observation / Slices for component / component:genomic-hgvs / id				n/a
Observation / Slices for component / component:genomic-hgvs / extension				n/a
Observation / Slices for component / component:genomic-hgvs / modifierExtension				N/A
Observation / Slices for component / component:genomic-hgvs / code		< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|	OBX-3	code	FiveWs.what[x]
Observation / Slices for component / component:genomic-hgvs / value[x]		363714003 |Interprets| < 441742003 |Evaluation finding|	OBX.2 OBX.5 OBX.6	value		363714003 |Interprets|
Observation / Slices for component / component:genomic-hgvs / dataAbsentReason			N/A	value.nullFlavor
Observation / Slices for component / component:genomic-hgvs / interpretation		< 260245000 |Findings values|	OBX-8	interpretationCode		363713009 |Has interpretation|
Observation / Slices for component / component:genomic-hgvs / referenceRange			OBX.7	outboundRelationship[typeCode=REFV]/target[classCode=OBS moodCode=EVN]
Observation / Slices for component / component:exact-start-end			containment by OBX-4?	outBoundRelationship[typeCode=COMP]
Observation / Slices for component / component:exact-start-end / id				n/a
Observation / Slices for component / component:exact-start-end / extension				n/a
Observation / Slices for component / component:exact-start-end / modifierExtension				N/A
Observation / Slices for component / component:exact-start-end / code		< 363787002 |Observable entity| OR < 386053000 |Evaluation procedure|	OBX-3	code	FiveWs.what[x]
Observation / Slices for component / component:exact-start-end / value[x]		363714003 |Interprets| < 441742003 |Evaluation finding|	OBX.2 OBX.5 OBX.6	value		363714003 |Interprets|
Observation / Slices for component / component:exact-start-end / dataAbsentReason			N/A	value.nullFlavor
Observation / Slices for component / component:exact-start-end / interpretation		< 260245000 |Findings values|	OBX-8	interpretationCode		363713009 |Has interpretation|
Observation / Slices for component / component:exact-start-end / referenceRange			OBX.7	outboundRelationship[typeCode=REFV]/target[classCode=OBS moodCode=EVN]
Documentation for this format