SHIFT SLS ValueSets Implementation Guide
0.1.0 - ci-build

SHIFT SLS ValueSets Implementation Guide, published by SHIFT-Task-Force. This guide is not an authorized publication; it is the continuous build for version 0.1.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/SHIFT-Task-Force/SLS-ValueSets/ and changes regularly. See the Directory of published versions

## Example Bundle: Synthea Sensitive Value Sets Bundle

Bundle SyntheaSensitiveValueSetsBundle of type collection

Entry 1 - fullUrl = http://SHIFT-Task-Force.github.io/slsValueSets/ValueSet/SyntheaAttentionDeficitDisorderVS

Resource ValueSet:

> This value set includes codes based on the following rules:

> - Include these codes as defined in `http://snomed.info/sct` version Not Stated (use latest from terminology server)

>   Code | Display
>   192127007 | Child attention deficit disorder
>   185347001 | Encounter for problem
>   386522008 | Overactivity/inattention behaviour management
>   228557008 | Cognitive and behavioral therapy

> - Include these codes as defined in `http://www.nlm.nih.gov/research/umls/rxnorm` version Not Stated (use latest from terminology server)

>   Code | Display
>   1091392 | methylphenidate hydrochloride 20 MG Oral Tablet
>   608139 | atomoxetine 100 MG Oral Capsule

Entry 2 - fullUrl = http://SHIFT-Task-Force.github.io/slsValueSets/ValueSet/SyntheaCerebralPalsyVS

Resource ValueSet:

> This value set includes codes based on the following rules:

> - Include these codes as defined in `http://snomed.info/sct` version Not Stated (use latest from terminology server)

>   Code | Display
>   1259900009 | Fitting of intraoral appliance (procedure)
>   128188000 | Cerebral palsy
>   108219001 | Physician visit with evaluation AND/OR management service
>   311834001 | Fibreoptic endoscopic evaluation of swallowing
>   288959006 | Unable to swallow saliva
>   182836005 | Medication review
>   717778001 | Mouth care (regime/therapy)
>   229069003 | Posture re-education
>   166001 | Behavioral therapy
>   311707005 | Oral motor exercises
>   312421008 | Radionuclide imaging
>   62718007 | Drooling
>   173521004 | Transposition of submandibular duct
>   47227006 | Excision of submandibular gland
>   302351005 | Ligation of salivary duct
>   53827007 | Hypersecretion of saliva
>   390906007 | Follow-up encounter (procedure)
>   267064002 | Retention of urine
>   14760008 | Constipation
>   389082000 | Constipation care (regime/therapy)
>   386490009 | Urinary retention care (regime/therapy)
>   40274000 | General outpatient clinic admission
>   183646003 | Postoperative visit
>   15802004 | Dystonia
>   22253000 | Pain
>   398152000 | Poor muscle tone (finding)
>   221360009 | Muscle spasticity
>   64859006 | Osteoporosis
>   84757009 | Epilepsy
>   110359009 | Intellectual disability
>   235595009 | Gastroesophageal reflux disease
>   371883000 | Outpatient procedure (procedure)
>   404909007 | Injection of botulinum toxin (procedure)
>   241149003 | Videofluoroscopy swallow
>   182777000 | Monitoring of patient
>   233604007 | Pneumonia
>   157265008 | Dislocation of hip joint

> - Include these codes as defined in `http://www.nlm.nih.gov/research/umls/rxnorm` version Not Stated (use latest from terminology server)

>   Code | Display
>   1437975 | glycopyrrolate 1.5 MG Oral Tablet [Glycate]
>   351875 | 72 HR scopolamine 0.0139 MG/HR Transdermal System [Transderm Scop]
>   885219 | benztropine mesylate 0.5 MG Oral Tablet
>   905269 | trihexyphenidyl hydrochloride 2 MG Oral Tablet
>   1789958 | abobotulinumtoxinA 300 UNT Injection [Dysport]
>   860182 | rimabotulinumtoxinB 5000 UNT/ML [Myobloc]
>   1190766 | atropine sulfate 0.31 MG/ML Ophthalmic Solution

Entry 3 - fullUrl = http://SHIFT-Task-Force.github.io/slsValueSets/ValueSet/SyntheaCysticFibrosisVS

Resource ValueSet:

> This value set includes codes based on the following rules:

> - Include these codes as defined in `http://snomed.info/sct` version Not Stated (use latest from terminology server)

>   Code | Display
>   190905008 | Cystic fibrosis
>   67799006 | Cystic fibrosis, prenatal detection
>   86964003 | Cystic fibrosis sweat test
>   444260001 | Screen for 20 common genetic mutations of cystic fibrosis using amplification refractory mutation system polymerase chain reaction assay technique (procedure)
>   206523001 | Meconium ileus
>   61919008 | Giving patient an enema
>   707418001 | Male infertility due to cystic fibrosis (disorder)
>   707577004 | Female infertility due to cystic fibrosis (disorder)
>   60151004 | Neonatal screening
>   734163000 | Care plan (record artifact)
>   185349003 | Encounter for check up (procedure)
>   399208008 | Plain chest X-ray
>   104173009 | Microbial culture of sputum
>   427089005 | Diabetes mellitus due to cystic fibrosis (disorder)
>   113076002 | Glucose tolerance test
>   703040004 | Agreeing on diabetes care plan (procedure)
>   232657004 | Single lung transplant
>   82078001 | Collection of blood specimen for laboratory
>   23426006 | Measurement of respiratory function
>   11218009 | Infection caused by Pseudomonas aeruginosa
>   406602003 | Staphylococcus aureus infection
>   448813005 | Sepsis caused by Pseudomonas
>   50849002 | Emergency room admission
>   14152002 | Intravenous infusion
>   281790008 | Intravenous antibiotic therapy
>   448417001 | Sepsis caused by Staphylococcus aureus (disorder)
>   48387007 | Incision of trachea
>   65710008 | Acute respiratory failure
>   16602611000119108 | Awaiting transplantation of lung (situation)

> - Include these codes as defined in `http://www.nlm.nih.gov/research/umls/rxnorm` version Not Stated (use latest from terminology server)

>   Code | Display
>   198767 | pancreatin 600 MG Oral Tablet
>   1243052 | kalydeco 150 MG Oral Tablet
>   205532 | PULMOZYME 1 MG/ML Inhalation Solution
>   1665227 | 20 ML ciprofloxacin 10 MG/ML Injection
>   313572 | vancomycin 50 MG/ML Injectable Solution

Entry 4 - fullUrl = http://SHIFT-Task-Force.github.io/slsValueSets/ValueSet/SyntheaDementiaVS

Resource ValueSet:

> This value set includes codes based on the following rules:

> - Include these codes as defined in `http://snomed.info/sct` version Not Stated (use latest from terminology server)

>   Code | Display
>   26929004 | Alzheimer's disease
>   230265002 | Familial Alzheimer's disease of early onset
>   386257007 | Dementia management (regime/therapy)
>   281036007 | Follow-up consultation
>   233604007 | Pneumonia
>   4525004 | Emergency department patient visit

> - Include these codes as defined in `http://loinc.org` version Not Stated (use latest from terminology server)

>   Code | Display
>   72106-8 | Total score [MMSE]

> - Include these codes as defined in `http://www.nlm.nih.gov/research/umls/rxnorm` version Not Stated (use latest from terminology server)

>   Code | Display
>   310436 | galantamine 4 MG Oral Tablet
>   997223 | donepezil hydrochloride 10 MG Oral Tablet
>   313185 | tacrine 10 MG Oral Capsule
>   1599803 | 24 HR donepezil hydrochloride 10 MG / memantine hydrochloride 28 MG Extended Release Oral Capsule
>   996740 | memantine hydrochloride 2 MG/ML Oral Solution
>   1100184 | donepezil hydrochloride 23 MG Oral Tablet

Entry 5 - fullUrl = http://SHIFT-Task-Force.github.io/slsValueSets/ValueSet/SyntheaOpioidAddictionVS

Resource ValueSet:

> This value set includes codes based on the following rules:

> - Include these codes as defined in `http://snomed.info/sct` version Not Stated (use latest from terminology server)

>   Code | Display
>   196416002 | Impacted molars
>   50849002 | Emergency room admission
>   65546002 | Extraction of wisdom tooth
>   82423001 | Chronic pain
>   183452005 | Emergency hospital admission
>   124171000119105 | Chronic intractable migraine without aura (disorder)
>   56876005 | Drug rehabilitation and detoxification
>   185347001 | Encounter for problem
>   1149222004 | Overdose
>   734163000 | Care plan (record artifact)
>   52052004 | Rehabilitation therapy
>   6525002 | Dependent drug abuse

> - Include these codes as defined in `http://loinc.org` version Not Stated (use latest from terminology server)

>   Code | Display
>   72514-3 | Pain severity - 0-10 verbal numeric rating [Score] - Reported

> - Include these codes as defined in `http://www.nlm.nih.gov/research/umls/rxnorm` version Not Stated (use latest from terminology server)

>   Code | Display
>   856987 | acetaminophen 300 MG / hydrocodone bitartrate 5 MG Oral Tablet
>   1860154 | Abuse-Deterrent 12 HR oxycodone hydrochloride 15 MG Extended Release Oral Tablet
>   1049221 | acetaminophen 325 MG / oxycodone hydrochloride 5 MG Oral Tablet

Entry 6 - fullUrl = http://SHIFT-Task-Force.github.io/slsValueSets/ValueSet/SyntheaPregnancyVS

Resource ValueSet:

> - Include these codes as defined in `http://snomed.info/sct` version Not Stated (use latest from terminology server)

>   Code | Display
>   72892002 | Normal pregnancy
>   424441002 | Prenatal initial visit (regime/therapy)
>   252160004 | Standard pregnancy test
>   169230002 | Viability US scan
>   134435003 | Routine antenatal care
>   274804006 | Evaluation of uterine fundal height (procedure)
>   225158009 | Auscultation of the fetal heart
>   44608003 | Blood group typing
>   104091002 | Hemogram, automated, with RBC, WBC, Hgb, Hct, Indices, Platelet count, and manual WBC differential
>   47758006 | Hepatitis B surface antigen measurement
>   31676001 | HIV antigen test
>   310861008 | Chlamydia antigen test
>   165829005 | Gonorrhea infection titer test (procedure)
>   269828009 | Syphilis infectious titre test
>   117010004 | Urine culture
>   90226004 | Cytopathology procedure, preparation of smear, genital source
>   395123002 | Urine screening test for diabetes (procedure)
>   104375008 | Hepatitis C antibody, confirmatory test
>   314098000 | Rubella screening test
>   104326007 | Measurement of Varicella-zoster virus antibody (procedure)
>   28163009 | Skin test for tuberculosis, Tine test
>   60218003 | Urinalysis, protein, qualitative
>   5880005 | Clinical examination
>   47200007 | High risk pregnancy
>   424619006 | Prenatal visit (regime/therapy)
>   443529005 | Detection of chromosomal aneuploidy in prenatal amniotic fluid specimen using fluorescence in situ hybridization screening technique (procedure)
>   271442007 | Fetal anatomy study
>   275833003 | AFP test - antenatal
>   169673001 | Antenatal Rhesus antibody screening
>   51116004 | Passive immunization
>   399014008 | Administration of diphtheria, pertussis, and tetanus vaccine
>   268556000 | Urine screening for sugar
>   398254007 | Pre-eclampsia (disorder)
>   198992004 | Eclampsia in pregnancy
>   118001005 | Streptococcus pneumoniae group B antigen assay
>   183460006 | Obstetric emergency hospital admission
>   31208007 | Medical induction of labor
>   18946005 | Epidural anesthesia
>   237001001 | Acceleration of labour
>   85548006 | Episiotomy
>   236974004 | Instrumental delivery
>   177157003 | Spontaneous breech delivery
>   386216000 | Human parturition, function (observable entity)
>   367494004 | Premature birth of newborn
>   11466000 | Cesarean section
>   19169002 | Spontaneous abortion in first trimester
>   85116003 | Spontaneous abortion in second trimester
>   156073000 | Complete miscarriage
>   35999006 | Blighted ovum
>   305408004 | Admission to surgical department
>   236931002 | Methotrexate injection into tubal pregnancy
>   445912000 | Excision of fallopian tube and surgical removal of ectopic pregnancy (procedure)
>   267253006 | Fetus with chromosomal abnormality
>   37849005 | Congenital uterine anomaly
>   609496007 | Complication occurring during pregnancy
>   171207006 | Depression screening
>   270427003 | Patient-initiated encounter
>   10383002 | Counseling for termination of pregnancy
>   714812005 | Induced termination of pregnancy (procedure)
>   386394001 | Pregnancy termination care (regime/therapy)
>   169762003 | Postnatal visit
>   133899007 | Postoperative care
>   79586000 | Tubal pregnancy
>   161744009 | History of miscarriage

Entry 7 - fullUrl = http://SHIFT-Task-Force.github.io/slsValueSets/ValueSet/SyntheaSelfHarmVS

Resource ValueSet:

> - Include these codes as defined in `http://snomed.info/sct` version Not Stated (use latest from terminology server)

>   Code | Display
>   86849004 | Suicidal poisoning
>   287185009 | Attempted suicide by cutting or stabbing
>   287182007 | Attempted suicide by suffocation
>   50849002 | Emergency room admission
>   90407005 | Evaluation of psychiatric state of patient
>   74857009 | Hospital admission, short-term, 24 hours
>   185347001 | Encounter for problem
>   183401008 | Anti-suicide psychotherapy
>   88848003 | Psychiatric follow-up
>   287193009 | Suicide using firearm (event)
>   287191006 | Suicide by suffocation
>   44301001 | Suicide
>   29240004 | Autopsy examination

Entry 8 - fullUrl = http://SHIFT-Task-Force.github.io/slsValueSets/ValueSet/SyntheaSpinaBifidaVS

Resource ValueSet:

> - Include these codes as defined in `http://snomed.info/sct` version Not Stated (use latest from terminology server)

>   Code | Display
>   414667000 | Meningomyelocele (disorder)
>   171131006 | Meningocele
>   76916001 | Spina bifida occulta
>   32485007 | Hospital admission
>   42839003 | Repair of myelomeningocele
>   308335008 | Patient encounter procedure
>   230745008 | Hydrocephalus
>   47020004 | Ventriculoperitoneal shunt
>   363215001 | Musculoskeletal system physical examination
>   298382003 | Scoliosis deformity of spine
>   302297009 | Congenital deformity of foot
>   120991000119102 | History of undergoing in utero procedure while a fetus
>   84728005 | Neurological examination
>   373587001 | Chiari malformation type II (disorder)
>   441763001 | Endoscopic exteriorisation of third ventricle
>   17881005 | Cauterization of choroid plexus
>   414564002 | Kyphosis deformity of spine (disorder)
>   303653007 | Head CT
>   241645008 | MRI of spine
>   9002005 | Manual testing of muscle function
>   1003755004 | Allergy to Hevea brasiliensis latex protein (finding)
>   252895004 | Urodynamics
>   709640007 | Doppler ultrasound of renal vein
>   68566005 | Urinary tract infectious disease
>   1163220007 | Pressure injury stage II (disorder)