Repositorio de Reportes de Biopsias Oncológicas
0.1.1-draft - STU1

Repositorio de Reportes de Biopsias Oncológicas, published by Unidad de Interoperabilidad - MINSAL. This guide is not an authorized publication; it is the continuous build for version 0.1.1-draft built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/Minsal-CL/R2BO/ and changes regularly. See the Directory of published versions

## Resource Profile: Perfil de Muestra ( Experimental )

Official URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-muestra-biopsia | Version: 0.1.1-draft
Standards status: Draft | Maturity Level: 1 | Computable Name: MuestraR2BO

Muestra de tejido o fluido biológico para análisis de antomía patologica.

Usages:

- Use this Profile: Perfil de Bundle del Documento and Perfil de Bundle para Generar Informe
- Refer to this Profile: Perfil de Origen para las Categorías T, N, M (Abstracto), Perfil del Documento de Biopsía, Perfil del Reporte de Anatomía Patológica, Perfil de Origen de Todos Los Resultados and Perfil de Solicitud de Informe de Anatomía Patológica
- Examples for this Profile: Specimen/r2bo-specimen-example
- CapabilityStatements using this Profile: CapabilityStatement del Cliente Analista del Repositorio de Biopsia del Ministerio de Salud, CapabilityStatement Cliente de Origen de Informes del Repositorio de Biopsia del Ministerio de Salud, CapabilityStatement Consumidor del Repositorio de Biopsia del Ministerio de Salud and CapabilityStatement Servidor del Repositorio de Biopsia del Ministerio de Salud

You can also check for usages in the FHIR IG Statistics

### Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

- Key Elements Table
- Differential Table
- Snapshot Table
- Statistics/References
- All

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | Specimen | Sample for analysis
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored
status | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type | S Σ | 0..1 | CodeableConcept | Tipo de material que forma el espécimen. Binding: Set de Valores de los Tipos de Especimen (extensible): Set de Valores para los tipos de muestras que puedan ser obtenidos
subject | S Σ | 1..1 | Reference(MINSAL Paciente) | Paciente de la muestra
receivedTime | S Σ | 1..1 | dateTime | Fecha de recepción de la muestra
collection | S | 1..1 | BackboneElement | Datos de la colección de la muestra
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
collector | S Σ | 0..1 | Reference(Perfil de Rol Profesional) | Profesional que recolecta la muestra
collected[x] | S Σ | 1..1 | dateTime | Fecha y hora de la colección de la muestra
method | S | 1..1 | CodeableConcept | Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
Slices for extension |  | 1..* | Extension | Extension Slice: Unordered, Open by value:url
extension:MetodoProcedimiento | S | 1..1 | CodeableConcept | Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-extension-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
bodySite | S | 1..1 | CodeableConcept | Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
Slices for extension |  |  |  | Content/Rules for all slices
extension:CalificadorLateralidad | S | 0..1 | CodeableConcept | Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
fastingStatus[x] | Σ | 0..1 |  | Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
fastingStatusCodeableConcept |  |  | CodeableConcept |
fastingStatusDuration |  |  | Duration |
note | S | 0..* | Annotation | Detalle u observación adiciona a la topografía al momento de extraer la muestra.
Documentation for this format

#### Terminology Bindings

Path | Status | Usage | ValueSet | Version | Source
Specimen.status | Base | required | SpecimenStatus | 📍4.0.1 | FHIR Std.
Specimen.type | Base | extensible | Set de Valores de los Tipos de Especimen | 📦0.1.1-draft | This IG
Specimen.collection.​method | Base | extensible | Set de Valores Para Procedimientos | 📦0.1.1-draft | This IG
Specimen.collection.​bodySite | Base | extensible | Set de Valores Para los Sitios del Cuerpo | 📦0.1.1-draft | This IG
Specimen.collection.​fastingStatus[x] | Base | extensible | hl7VS-relevantClincialInformation | 📍2.0.0 | THO v6.5

#### Constraints

Id | Grade | Path(s) | Description | Expression
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources | `contained.contained.empty()`
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource | `contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()`
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated | `contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()`
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label | `contained.meta.security.empty()`
dom-6 | best practice | Specimen | A resource should have narrative for robust management | `text.`div`.exists()`
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children | `hasValue() or (children().count() > id.count())`
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both | `extension.exists() != value.exists()`

This structure is derived from Specimen

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  |  | Specimen |
type | S | 0..1 | CodeableConcept | Tipo de material que forma el espécimen. Binding: Set de Valores de los Tipos de Especimen (extensible): Set de Valores para los tipos de muestras que puedan ser obtenidos
subject | S | 1..1 | Reference(MINSAL Paciente) | Paciente de la muestra
receivedTime | S | 1..1 | dateTime | Fecha de recepción de la muestra
collection | S | 1..1 | BackboneElement | Datos de la colección de la muestra
collector | S | 0..1 | Reference(Perfil de Rol Profesional) | Profesional que recolecta la muestra
collected[x] | S | 1..1 | dateTime | Fecha y hora de la colección de la muestra
method | S | 1..1 | CodeableConcept | Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
extension |  | 1..* | Extension | Extension
Slices for extension |  |  |  | Content/Rules for all slices
extension:MetodoProcedimiento | S | 1..1 | CodeableConcept | Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-extension-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
bodySite | S | 1..1 | CodeableConcept | Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
Slices for extension |  |  |  | Content/Rules for all slices
extension:CalificadorLateralidad | S | 0..1 | CodeableConcept | Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
fastingStatus[x] |  | 0..1 | CodeableConcept, Duration | Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
note | S | 0..* | Annotation | Detalle u observación adiciona a la topografía al momento de extraer la muestra.
Documentation for this format

#### Terminology Bindings (Differential)

Path | Status | Usage | ValueSet | Version | Source
Specimen.type | Base | extensible | Set de Valores de los Tipos de Especimen | 📦0.1.1-draft | This IG
Specimen.collection.​method | Base | extensible | Set de Valores Para Procedimientos | 📦0.1.1-draft | This IG
Specimen.collection.​bodySite | Base | extensible | Set de Valores Para los Sitios del Cuerpo | 📦0.1.1-draft | This IG
Specimen.collection.​fastingStatus[x] | Base | extensible | hl7VS-relevantClincialInformation | 📍2.0.0 | THO v6.5

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | Specimen | Sample for analysis
id | Σ | 0..1 | id | Logical id of this artifact
meta | Σ | 0..1 | Meta | Metadata about the resource
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created
language |  | 0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
Additional Bindings | Purpose
AllLanguages | Max Binding
text |  | 0..1 | Narrative | Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements
contained |  | 0..* | Resource | Contained, inline Resources
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored
identifier | Σ | 0..* | Identifier | External Identifier
accessionIdentifier | Σ | 0..1 | Identifier | Identifier assigned by the lab
status | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type | S Σ | 0..1 | CodeableConcept | Tipo de material que forma el espécimen. Binding: Set de Valores de los Tipos de Especimen (extensible): Set de Valores para los tipos de muestras que puedan ser obtenidos
subject | S Σ | 1..1 | Reference(MINSAL Paciente) | Paciente de la muestra
receivedTime | S Σ | 1..1 | dateTime | Fecha de recepción de la muestra
parent |  | 0..* | Reference(Specimen) | Specimen from which this specimen originated
request |  | 0..* | Reference(ServiceRequest) | Why the specimen was collected
collection | S | 1..1 | BackboneElement | Datos de la colección de la muestra
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
collector | S Σ | 0..1 | Reference(Perfil de Rol Profesional) | Profesional que recolecta la muestra
collected[x] | S Σ | 1..1 | dateTime | Fecha y hora de la colección de la muestra
duration | Σ | 0..1 | Duration | How long it took to collect specimen
quantity |  | 0..1 | SimpleQuantity(4.0.1) | The quantity of specimen collected
method | S | 1..1 | CodeableConcept | Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
id |  | 0..1 | string | Unique id for inter-element referencing
Slices for extension |  | 1..* | Extension | Extension Slice: Unordered, Open by value:url
extension:MetodoProcedimiento | S | 1..1 | CodeableConcept | Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-extension-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
coding | Σ | 0..* | Coding | Code defined by a terminology system
text | Σ | 0..1 | string | Plain text representation of the concept
bodySite | S | 1..1 | CodeableConcept | Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
id |  | 0..1 | string | Unique id for inter-element referencing
Slices for extension |  | 0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url
extension:CalificadorLateralidad | S | 0..1 | CodeableConcept | Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
coding | Σ | 0..* | Coding | Code defined by a terminology system
text | Σ | 0..1 | string | Plain text representation of the concept
fastingStatus[x] | Σ | 0..1 |  | Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
fastingStatusCodeableConcept |  |  | CodeableConcept |
fastingStatusDuration |  |  | Duration |
processing |  | 0..* | BackboneElement | Processing and processing step details
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
description |  | 0..1 | string | Textual description of procedure
procedure |  | 0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen.
additive |  | 0..* | Reference(Substance) | Material used in the processing step
time[x] |  | 0..1 |  | Date and time of specimen processing
timeDateTime |  |  | dateTime |
timePeriod |  |  | Period |
container |  | 0..* | BackboneElement | Direct container of specimen (tube/slide, etc.)
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
identifier | Σ | 0..* | Identifier | Id for the container
description |  | 0..1 | string | Textual description of the container
type |  | 0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: SpecimenContainerType (example): Type of specimen container.
capacity |  | 0..1 | SimpleQuantity(4.0.1) | Container volume or size
specimenQuantity |  | 0..1 | SimpleQuantity(4.0.1) | Quantity of specimen within container
additive[x] |  | 0..1 |  | Additive associated with container Binding: hl7VS-additivePreservative (example): Substance added to specimen container.
additiveCodeableConcept |  |  | CodeableConcept |
additiveReference |  |  | Reference(Substance) |
condition | Σ | 0..* | CodeableConcept | State of the specimen Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen.
note | S | 0..* | Annotation | Detalle u observación adiciona a la topografía al momento de extraer la muestra.
Documentation for this format

#### Terminology Bindings

Path | Status | Usage | ValueSet | Version | Source
Specimen.language | Base | preferred | Common Languages | 📍4.0.1 | FHIR Std.
Specimen.status | Base | required | SpecimenStatus | 📍4.0.1 | FHIR Std.
Specimen.type | Base | extensible | Set de Valores de los Tipos de Especimen | 📦0.1.1-draft | This IG
Specimen.collection.​method | Base | extensible | Set de Valores Para Procedimientos | 📦0.1.1-draft | This IG
Specimen.collection.​bodySite | Base | extensible | Set de Valores Para los Sitios del Cuerpo | 📦0.1.1-draft | This IG
Specimen.collection.​fastingStatus[x] | Base | extensible | hl7VS-relevantClincialInformation | 📍2.0.0 | THO v6.5
Specimen.processing.​procedure | Base | example | Specimen processing procedure | 📍4.0.1 | FHIR Std.
Specimen.container.type | Base | example | Specimen Container Type | 📍4.0.1 | FHIR Std.
Specimen.container.additive[x] | Base | example | hl7VS-additivePreservative | 📦2.0.0 | THO v6.5
Specimen.condition | Base | extensible | hl7VS-specimenCondition | 📦2.0.0 | THO v6.5

#### Constraints

Id | Grade | Path(s) | Description | Expression
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources | `contained.contained.empty()`
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource | `contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()`
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated | `contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()`
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label | `contained.meta.security.empty()`
dom-6 | best practice | Specimen | A resource should have narrative for robust management | `text.`div`.exists()`
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children | `hasValue() or (children().count() > id.count())`
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both | `extension.exists() != value.exists()`

This structure is derived from Specimen

Summary

Mandatory: 8 elements
Must-Support: 11 elements

Structures

This structure refers to these other structures:

- MINSAL Paciente (https://interoperabilidad.minsal.cl/fhir/ig/nid/StructureDefinition/MINSALPaciente)
- Perfil de Rol Profesional (https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-rol-profesional-minsal)

Extensions

This structure refers to these extensions:

- https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-extension-tipo-procedimientos-biopsias
- http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier

Maturity: 1

Key Elements View

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | Specimen | Sample for analysis
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored
status | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type | S Σ | 0..1 | CodeableConcept | Tipo de material que forma el espécimen. Binding: Set de Valores de los Tipos de Especimen (extensible): Set de Valores para los tipos de muestras que puedan ser obtenidos
subject | S Σ | 1..1 | Reference(MINSAL Paciente) | Paciente de la muestra
receivedTime | S Σ | 1..1 | dateTime | Fecha de recepción de la muestra
collection | S | 1..1 | BackboneElement | Datos de la colección de la muestra
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
collector | S Σ | 0..1 | Reference(Perfil de Rol Profesional) | Profesional que recolecta la muestra
collected[x] | S Σ | 1..1 | dateTime | Fecha y hora de la colección de la muestra
method | S | 1..1 | CodeableConcept | Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
Slices for extension |  | 1..* | Extension | Extension Slice: Unordered, Open by value:url
extension:MetodoProcedimiento | S | 1..1 | CodeableConcept | Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-extension-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
bodySite | S | 1..1 | CodeableConcept | Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
Slices for extension |  |  |  | Content/Rules for all slices
extension:CalificadorLateralidad | S | 0..1 | CodeableConcept | Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
fastingStatus[x] | Σ | 0..1 |  | Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
fastingStatusCodeableConcept |  |  | CodeableConcept |
fastingStatusDuration |  |  | Duration |
note | S | 0..* | Annotation | Detalle u observación adiciona a la topografía al momento de extraer la muestra.
Documentation for this format

#### Terminology Bindings

Path | Status | Usage | ValueSet | Version | Source
Specimen.status | Base | required | SpecimenStatus | 📍4.0.1 | FHIR Std.
Specimen.type | Base | extensible | Set de Valores de los Tipos de Especimen | 📦0.1.1-draft | This IG
Specimen.collection.​method | Base | extensible | Set de Valores Para Procedimientos | 📦0.1.1-draft | This IG
Specimen.collection.​bodySite | Base | extensible | Set de Valores Para los Sitios del Cuerpo | 📦0.1.1-draft | This IG
Specimen.collection.​fastingStatus[x] | Base | extensible | hl7VS-relevantClincialInformation | 📍2.0.0 | THO v6.5

#### Constraints

Id | Grade | Path(s) | Description | Expression
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources | `contained.contained.empty()`
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource | `contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()`
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated | `contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()`
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label | `contained.meta.security.empty()`
dom-6 | best practice | Specimen | A resource should have narrative for robust management | `text.`div`.exists()`
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children | `hasValue() or (children().count() > id.count())`
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both | `extension.exists() != value.exists()`

Differential View

This structure is derived from Specimen

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  |  | Specimen |
type | S | 0..1 | CodeableConcept | Tipo de material que forma el espécimen. Binding: Set de Valores de los Tipos de Especimen (extensible): Set de Valores para los tipos de muestras que puedan ser obtenidos
subject | S | 1..1 | Reference(MINSAL Paciente) | Paciente de la muestra
receivedTime | S | 1..1 | dateTime | Fecha de recepción de la muestra
collection | S | 1..1 | BackboneElement | Datos de la colección de la muestra
collector | S | 0..1 | Reference(Perfil de Rol Profesional) | Profesional que recolecta la muestra
collected[x] | S | 1..1 | dateTime | Fecha y hora de la colección de la muestra
method | S | 1..1 | CodeableConcept | Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
extension |  | 1..* | Extension | Extension
Slices for extension |  |  |  | Content/Rules for all slices
extension:MetodoProcedimiento | S | 1..1 | CodeableConcept | Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-extension-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
bodySite | S | 1..1 | CodeableConcept | Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
Slices for extension |  |  |  | Content/Rules for all slices
extension:CalificadorLateralidad | S | 0..1 | CodeableConcept | Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
fastingStatus[x] |  | 0..1 | CodeableConcept, Duration | Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
note | S | 0..* | Annotation | Detalle u observación adiciona a la topografía al momento de extraer la muestra.
Documentation for this format

#### Terminology Bindings (Differential)

Path | Status | Usage | ValueSet | Version | Source
Specimen.type | Base | extensible | Set de Valores de los Tipos de Especimen | 📦0.1.1-draft | This IG
Specimen.collection.​method | Base | extensible | Set de Valores Para Procedimientos | 📦0.1.1-draft | This IG
Specimen.collection.​bodySite | Base | extensible | Set de Valores Para los Sitios del Cuerpo | 📦0.1.1-draft | This IG
Specimen.collection.​fastingStatus[x] | Base | extensible | hl7VS-relevantClincialInformation | 📍2.0.0 | THO v6.5

Snapshot View

Name | Flags | Card. | Type | Description & Constraints Filter: Bindings Constraints Obligations
--- | --- | --- | --- | ---
Specimen |  | 0..* | Specimen | Sample for analysis
id | Σ | 0..1 | id | Logical id of this artifact
meta | Σ | 0..1 | Meta | Metadata about the resource
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created
language |  | 0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
Additional Bindings | Purpose
AllLanguages | Max Binding
text |  | 0..1 | Narrative | Text summary of the resource, for human interpretation This profile does not constrain the narrative in regard to content, language, or traceability to data elements
contained |  | 0..* | Resource | Contained, inline Resources
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored
identifier | Σ | 0..* | Identifier | External Identifier
accessionIdentifier | Σ | 0..1 | Identifier | Identifier assigned by the lab
status | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen.
type | S Σ | 0..1 | CodeableConcept | Tipo de material que forma el espécimen. Binding: Set de Valores de los Tipos de Especimen (extensible): Set de Valores para los tipos de muestras que puedan ser obtenidos
subject | S Σ | 1..1 | Reference(MINSAL Paciente) | Paciente de la muestra
receivedTime | S Σ | 1..1 | dateTime | Fecha de recepción de la muestra
parent |  | 0..* | Reference(Specimen) | Specimen from which this specimen originated
request |  | 0..* | Reference(ServiceRequest) | Why the specimen was collected
collection | S | 1..1 | BackboneElement | Datos de la colección de la muestra
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
collector | S Σ | 0..1 | Reference(Perfil de Rol Profesional) | Profesional que recolecta la muestra
collected[x] | S Σ | 1..1 | dateTime | Fecha y hora de la colección de la muestra
duration | Σ | 0..1 | Duration | How long it took to collect specimen
quantity |  | 0..1 | SimpleQuantity(4.0.1) | The quantity of specimen collected
method | S | 1..1 | CodeableConcept | Método de colección de la muestra Binding: Set de Valores Para Procedimientos (extensible)
id |  | 0..1 | string | Unique id for inter-element referencing
Slices for extension |  | 1..* | Extension | Extension Slice: Unordered, Open by value:url
extension:MetodoProcedimiento | S | 1..1 | CodeableConcept | Método de procedimiento URL: https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-extension-tipo-procedimientos-biopsias Binding: Set de Valores Para Tipo de Procedimientos (required)
coding | Σ | 0..* | Coding | Code defined by a terminology system
text | Σ | 0..1 | string | Plain text representation of the concept
bodySite | S | 1..1 | CodeableConcept | Sitio anatómico de la colección Binding: Set de Valores Para los Sitios del Cuerpo (extensible)
id |  | 0..1 | string | Unique id for inter-element referencing
Slices for extension |  | 0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url
extension:CalificadorLateralidad | S | 0..1 | CodeableConcept | Calificador para lateralidad para este sitio del cuerpo URL: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier Binding: Laterality Qualifier Value Set (required)
coding | Σ | 0..* | Coding | Code defined by a terminology system
text | Σ | 0..1 | string | Plain text representation of the concept
fastingStatus[x] | Σ | 0..1 |  | Whether or how long patient abstained from food and/or drink Binding: Hl7VSRelevantClincialInformation (2.0.0) (extensible)
fastingStatusCodeableConcept |  |  | CodeableConcept |
fastingStatusDuration |  |  | Duration |
processing |  | 0..* | BackboneElement | Processing and processing step details
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
description |  | 0..1 | string | Textual description of procedure
procedure |  | 0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen.
additive |  | 0..* | Reference(Substance) | Material used in the processing step
time[x] |  | 0..1 |  | Date and time of specimen processing
timeDateTime |  |  | dateTime |
timePeriod |  |  | Period |
container |  | 0..* | BackboneElement | Direct container of specimen (tube/slide, etc.)
id |  | 0..1 | string | Unique id for inter-element referencing
extension |  | 0..* | Extension | Additional content defined by implementations
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized
identifier | Σ | 0..* | Identifier | Id for the container
description |  | 0..1 | string | Textual description of the container
type |  | 0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: SpecimenContainerType (example): Type of specimen container.
capacity |  | 0..1 | SimpleQuantity(4.0.1) | Container volume or size
specimenQuantity |  | 0..1 | SimpleQuantity(4.0.1) | Quantity of specimen within container
additive[x] |  | 0..1 |  | Additive associated with container Binding: hl7VS-additivePreservative (example): Substance added to specimen container.
additiveCodeableConcept |  |  | CodeableConcept |
additiveReference |  |  | Reference(Substance) |
condition | Σ | 0..* | CodeableConcept | State of the specimen Binding: hl7VS-specimenCondition (extensible): Codes describing the state of the specimen.
note | S | 0..* | Annotation | Detalle u observación adiciona a la topografía al momento de extraer la muestra.
Documentation for this format

#### Terminology Bindings

Path | Status | Usage | ValueSet | Version | Source
Specimen.language | Base | preferred | Common Languages | 📍4.0.1 | FHIR Std.
Specimen.status | Base | required | SpecimenStatus | 📍4.0.1 | FHIR Std.
Specimen.type | Base | extensible | Set de Valores de los Tipos de Especimen | 📦0.1.1-draft | This IG
Specimen.collection.​method | Base | extensible | Set de Valores Para Procedimientos | 📦0.1.1-draft | This IG
Specimen.collection.​bodySite | Base | extensible | Set de Valores Para los Sitios del Cuerpo | 📦0.1.1-draft | This IG
Specimen.collection.​fastingStatus[x] | Base | extensible | hl7VS-relevantClincialInformation | 📍2.0.0 | THO v6.5
Specimen.processing.​procedure | Base | example | Specimen processing procedure | 📍4.0.1 | FHIR Std.
Specimen.container.type | Base | example | Specimen Container Type | 📍4.0.1 | FHIR Std.
Specimen.container.additive[x] | Base | example | hl7VS-additivePreservative | 📦2.0.0 | THO v6.5
Specimen.condition | Base | extensible | hl7VS-specimenCondition | 📦2.0.0 | THO v6.5

#### Constraints

Id | Grade | Path(s) | Description | Expression
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources | `contained.contained.empty()`
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource | `contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()`
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated | `contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()`
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label | `contained.meta.security.empty()`
dom-6 | best practice | Specimen | A resource should have narrative for robust management | `text.`div`.exists()`
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children | `hasValue() or (children().count() > id.count())`
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both | `extension.exists() != value.exists()`

This structure is derived from Specimen

Summary

Mandatory: 8 elements
Must-Support: 11 elements

Structures

This structure refers to these other structures:

- MINSAL Paciente (https://interoperabilidad.minsal.cl/fhir/ig/nid/StructureDefinition/MINSALPaciente)
- Perfil de Rol Profesional (https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-rol-profesional-minsal)

Extensions

This structure refers to these extensions:

- https://interoperabilidad.minsal.cl/fhir/ig/r2bo/StructureDefinition/r2bo-extension-tipo-procedimientos-biopsias
- http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-laterality-qualifier

Maturity: 1

Other representations of profile: CSV, Excel, Schematron