INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/HL7NZ/nhi --branch contacts3 repo DEBUG:root:Time to deadline 35879.997911 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35856.610292 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35854.387905 seconds npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported added 139 packages in 5s 14 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.8.0 npm notice Changelog: npm notice Run `npm install -g npm@11.8.0` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7NZ/nhi/ -out /scratch/repo DEBUG:root:Time to deadline 35848.796831 seconds FHIR IG Publisher Version 2.0.30 (Git# 04ebe87f19c1). Built 2026-01-20T18:29:40.591Z (6 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7NZ/nhi/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Tuesday, January 27, 2026, 12:12:25 AM Coordinated Universal Time (2026-01-27T00:12:25Z) Build FHIR IG from /scratch/repo (00:00.021 / 00:00.021, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.023, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.002 / 00:00.026, 97Mb) Found dependency on fhir.org.nz.ig.base#2.0.0 in Sushi config. Pre-installing (00:00.007 / 00:00.034, 97Mb) Installing fhir.org.nz.ig.base#2.0.0 to the package cache  Fetching:  Installing fhir.org.nz.ig.base#2.0.0  done. Found dependency on hl7.org.nz.fhir.ig.hip-core#1.9.2 in Sushi config. Pre-installing (00:02.891 / 00:02.925, 72Mb) Installing hl7.org.nz.fhir.ig.hip-core#1.9.2 to the package cache  Fetching: Error fetching https://packages2.fhir.org/packages/hl7.org.nz.fhir.ig.hip-core: Not Found Error fetching https://packages.fhir.org/hl7.org.nz.fhir.ig.hip-core: Not Found Unable to install hl7.org.nz.fhir.ig.hip-core#1.9.2: Unable to resolve package id hl7.org.nz.fhir.ig.hip-core#1.9.2 (00:01.117 / 00:04.042, 120Mb) Trying to go on (00:00.000 / 00:04.043, 120Mb) Run Sushi on /scratch/repo (00:00.001 / 00:04.045, 120Mb) Sushi: info Running SUSHI v3.17.0 (implements FHIR Shorthand specification v3.0.0) (00:00.559 / 00:04.604, 120Mb) Sushi: info Arguments: (00:00.000 / 00:04.604, 120Mb) Sushi: info --require-latest (00:00.000 / 00:04.605, 120Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:04.605, 120Mb) Sushi: info /scratch/repo (00:00.000 / 00:04.605, 120Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.724 / 00:05.330, 120Mb) Sushi: info Importing FSH text... (00:00.118 / 00:05.449, 120Mb) Sushi: info Preprocessed 41 documents with 78 aliases. (00:00.385 / 00:05.834, 120Mb) Sushi: info Imported 18 definitions and 31 instances. (00:00.049 / 00:05.884, 120Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.123 / 00:06.007, 128Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.9.0 (00:00.539 / 00:06.546, 128Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.9.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.9.0 (00:00.000 / 00:06.547, 128Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.9.0 (00:00.830 / 00:07.377, 128Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.9.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.9.0 (00:00.002 / 00:07.380, 128Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.9.0 with 117 resources (00:00.059 / 00:07.440, 128Mb) Sushi: info Resolved hl7.terminology.r4#latest to concrete version 7.0.1 (00:00.462 / 00:07.902, 128Mb) Sushi: info Attempting to download hl7.terminology.r4#7.0.1 from https://packages.fhir.org/hl7.terminology.r4/7.0.1 (00:00.000 / 00:07.902, 128Mb) Sushi: info Downloaded hl7.terminology.r4#7.0.1 (00:02.967 / 00:10.870, 128Mb) Sushi: info Cached hl7.terminology.r4#7.0.1 to /home/fhiruser/.fhir/packages/hl7.terminology.r4#7.0.1 (00:00.001 / 00:10.871, 128Mb) Sushi: info Loaded hl7.terminology.r4#7.0.1 with 4096 resources (00:01.208 / 00:12.079, 128Mb) Sushi: info Loaded fhir.org.nz.ig.base#2.0.0 with 106 resources (00:00.035 / 00:12.114, 128Mb) Sushi: info Attempting to download hl7.org.nz.fhir.ig.hip-core#1.9.2 from https://packages.fhir.org/hl7.org.nz.fhir.ig.hip-core/1.9.2 (00:00.000 / 00:12.115, 128Mb) Sushi: info Attempting to download hl7.org.nz.fhir.ig.hip-core#1.9.2 from https://packages2.fhir.org/packages/hl7.org.nz.fhir.ig.hip-core/1.9.2 (00:00.452 / 00:12.567, 128Mb) Sushi: error Failed to load hl7.org.nz.fhir.ig.hip-core#1.9.2: Failed to download hl7.org.nz.fhir.ig.hip-core#1.9.2 from the registry (00:00.257 / 00:12.825, 128Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:12.825, 128Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:03.175 / 00:16.001, 128Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.001 / 00:16.002, 128Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.081 / 00:17.084, 128Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r4#latest to concrete version 5.2.0 (00:00.465 / 00:17.549, 128Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 00:17.549, 128Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.532 / 00:19.082, 128Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.000 / 00:19.083, 128Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.284 / 00:19.368, 128Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.010 / 00:19.378, 128Mb) Sushi: info Converting FSH to FHIR resources... (00:00.017 / 00:19.395, 128Mb) Sushi: warn Slice named ethnicity already exists on element Patient.extension of NhiPatient (00:00.103 / 00:19.498, 128Mb) Sushi: File: /scratch/repo/input/fsh/profiles/profile-NhiPatient.fsh (00:00.000 / 00:19.499, 128Mb) Sushi: Line: 49 - 55 (00:00.000 / 00:19.499, 128Mb) Sushi: info Converted 16 FHIR StructureDefinitions. (00:01.032 / 00:20.531, 128Mb) Sushi: info Converted 2 FHIR ValueSets. (00:00.097 / 00:20.628, 128Mb) Sushi: warn Sliced element Patient.deceased[x].extension is being accessed via numeric index. Use slice names in rule paths when possible. (00:02.143 / 00:22.772, 128Mb) Sushi: File: /scratch/repo/input/fsh/examples/createNhiPatient-3.fsh (00:00.000 / 00:22.772, 128Mb) Sushi: Line: 38 (00:00.000 / 00:22.772, 128Mb) Sushi: info Converted 31 FHIR instances. (00:02.413 / 00:25.185, 128Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.000 / 00:25.186, 128Mb) Sushi: info Exported 46 FHIR resources as JSON. (00:00.081 / 00:25.268, 128Mb) Sushi: info Assembling Implementation Guide sources... (00:00.002 / 00:25.270, 128Mb) Sushi: info Generated ImplementationGuide-hl7.org.nz.fhir.ig.nhi.json (00:00.038 / 00:25.308, 128Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:25.308, 128Mb) Sushi: info The sample-ig located at https://github.com/FHIR/sample-ig contains scripts useful for downloading and running the IG Publisher. (00:00.000 / 00:25.309, 128Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 00:25.310, 128Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.310, 128Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:25.310, 128Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:25.310, 128Mb) Sushi: | | 4 | 11 | 1 | 0 | | (00:00.000 / 00:25.311, 128Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.311, 128Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.311, 128Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:25.311, 128Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:25.311, 128Mb) Sushi: | | 2 | 0 | 31 | | (00:00.000 / 00:25.311, 128Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:25.312, 128Mb) Sushi: | | (00:00.000 / 00:25.312, 128Mb) Sushi: =================================================================== (00:00.000 / 00:25.312, 128Mb) Sushi: | Are you lost at sea? 1 Error 2 Warnings | (00:00.000 / 00:25.312, 128Mb) Sushi: =================================================================== (00:00.000 / 00:25.312, 128Mb) Sushi couldn't be run. Complete output from running Sushi : (00:00.021 / 00:25.334, 128Mb) Note: Check that Sushi is installed correctly ("npm install -g fsh-sushi". On windows, get npm from https://www.npmjs.com/get-npm) (00:00.000 / 00:25.334, 128Mb) Exception: Process exited with an error: 1 (Exit value: 1) (00:00.000 / 00:25.334, 128Mb) Publishing Content Failed: Process exited with an error: 1 (Exit value: 1) (00:00.000 / 00:25.334, 128Mb) (00:00.000 / 00:25.334, 128Mb) Use -? to get command line help (00:00.000 / 00:25.334, 128Mb) (00:00.000 / 00:25.334, 128Mb) Stack Dump (for debugging): (00:00.000 / 00:25.334, 128Mb) org.apache.commons.exec.ExecuteException: Process exited with an error: 1 (Exit value: 1) at org.apache.commons.exec.DefaultExecutor.executeInternal(DefaultExecutor.java:404) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:166) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:153) at org.hl7.fhir.igtools.publisher.FSHRunner.runFsh(FSHRunner.java:89) at org.hl7.fhir.igtools.publisher.PublisherIGLoader.initialize(PublisherIGLoader.java:143) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:222) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:1594)