Lithuanian Laboratory Implementation Guide
0.0.1 - ci-build Lithuania vėliava

Lithuanian Laboratory Implementation Guide, published by Lithuanian Medical Library. This guide is not an authorized publication; it is the continuous build for version 0.0.1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7LT/ig-lt-lab/ and changes regularly. See the Directory of published versions

: Observation: HER2 FISH Molecular Test (example)

Neapdorotas xml | Atsisiųsti


<Observation xmlns="http://hl7.org/fhir">
  <id value="observation-her2-fish-example"/>
  <meta>
    <profile
             value="https://hl7.lt/fhir/lab/StructureDefinition/her2-fish-observation-lt-lab"/>
  </meta>
  <language value="lt"/>
  <text>
    <status value="generated"/>
    <div xml:lang="lt" lang="lt"><hr/><p><b>Lithuanian</b></p><hr/><p class="res-header-id"><b>Generated Narrative: Observation observation-her2-fish-example</b></p><a name="lt-observation-her2-fish-example"> </a><a name="lt-hcobservation-her2-fish-example"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Language: en</p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-her2-fish-observation-lt-lab.html">Observation: HER2 FISH/CISH/SISH Molecular Test</a></p></div><p><b>status</b>: Final</p><p><b>code</b>: <span title="Codes:{http://loinc.org 31150-6}">ERBB2 gene duplication [Presence] in Tissue by FISH</span></p><p><b>subject</b>: <a href="Patient-patient-example.html">Jonas Petrauskas(official) Male, DoB: 1985-01-01 ( http://hospital-lt.lt/patient-id#HOSPLT-10005 (use: usual, ))</a></p><p><b>effective</b>: 2025-01-20 14:00:00+0200</p><p><b>performer</b>: <a href="Practitioner-practitioner-example.html">Practitioner Registrar</a></p><p><b>method</b>: <span title="Codes:">FISH</span></p><p><b>specimen</b>: <a href="Specimen-specimen-right-breast-example.html">Specimen: identifier = http://hospital.lt/sid/specimen-number#barcode12345; accessionIdentifier = B26-6526; status = available; type = Specimen from breast obtained by biopsy</a></p><blockquote><p><b>component</b></p><p><b>code</b>: <span title="Codes:{http://loinc.org 85318-4}">ERBB2 gene duplication [Presence] in Breast cancer specimen by FISH</span></p><p><b>value</b>: 2.1 copies/nucleus<span style="background: LightGoldenRodYellow"> (Details: UCUM  code{copies}/nucleus = '{copies}/nucleus')</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: <span title="Codes:{http://loinc.org 85319-2}">HER2 [Presence] in Breast cancer specimen by Immune stain</span></p><p><b>value</b>: 1.8 copies/nucleus<span style="background: LightGoldenRodYellow"> (Details: UCUM  code{copies}/nucleus = '{copies}/nucleus')</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: <span title="Codes:{http://loinc.org 49683-6}">ERBB2 gene copy number/Chromosome 17 copy number in Tissue by FISH</span></p><p><b>value</b>: 1.17 ratio<span style="background: LightGoldenRodYellow"> (Details: UCUM  code{ratio} = '{ratio}')</span></p></blockquote><blockquote><p><b>component</b></p><p><b>code</b>: <span title="Codes:{http://loinc.org 85320-0}">Foci [Type] in Breast cancer specimen by Light microscopy</span></p><p><b>value</b>: <span title="Codes:{https://tx.hl7.lt/fhir/CodeSystem/her2-fish-result negative}">Negative (HER2&lt;4, HER2/CEP17&lt;2)</span></p></blockquote></div>
  </text>
  <status value="final"/>
  <code>
    <coding>
      <system value="http://loinc.org"/>
      <code value="31150-6"/>
      <display value="ERBB2 gene duplication [Presence] in Tissue by FISH"/>
    </coding>
  </code>
  <subject>🔗 
    <reference value="Patient/patient-example"/>
  </subject>
  <effectiveDateTime value="2025-01-20T14:00:00+02:00"/>
  <performer>🔗 
    <reference value="Practitioner/practitioner-example"/>
  </performer>
  <method>
    <text value="FISH"/>
  </method>
  <specimen>🔗 
    <reference value="Specimen/specimen-right-breast-example"/>
  </specimen>
  <component>
    <code>
      <coding>
        <system value="http://loinc.org"/>
        <code value="85318-4"/>
        <display
                 value="ERBB2 gene duplication [Presence] in Breast cancer specimen by FISH"/>
      </coding>
    </code>
    <valueQuantity>
      <value value="2.1"/>
      <unit value="copies/nucleus"/>
      <system value="http://unitsofmeasure.org"/>
      <code value="{copies}/nucleus"/>
    </valueQuantity>
  </component>
  <component>
    <code>
      <coding>
        <system value="http://loinc.org"/>
        <code value="85319-2"/>
        <display
                 value="HER2 [Presence] in Breast cancer specimen by Immune stain"/>
      </coding>
    </code>
    <valueQuantity>
      <value value="1.8"/>
      <unit value="copies/nucleus"/>
      <system value="http://unitsofmeasure.org"/>
      <code value="{copies}/nucleus"/>
    </valueQuantity>
  </component>
  <component>
    <code>
      <coding>
        <system value="http://loinc.org"/>
        <code value="49683-6"/>
        <display
                 value="ERBB2 gene copy number/Chromosome 17 copy number in Tissue by FISH"/>
      </coding>
    </code>
    <valueQuantity>
      <value value="1.17"/>
      <unit value="ratio"/>
      <system value="http://unitsofmeasure.org"/>
      <code value="{ratio}"/>
    </valueQuantity>
  </component>
  <component>
    <code>
      <coding>
        <system value="http://loinc.org"/>
        <code value="85320-0"/>
        <display
                 value="Foci [Type] in Breast cancer specimen by Light microscopy"/>
      </coding>
    </code>
    <valueCodeableConcept>
      <coding>
        <system value="https://tx.hl7.lt/fhir/CodeSystem/her2-fish-result"/>
        <code value="negative"/>
        <display value="Negative (HER2&lt;4, HER2/CEP17&lt;2)"/>
      </coding>
    </valueCodeableConcept>
  </component>
</Observation>