INFO:root:about to clone! DEBUG:root:running: git clone --recursive https://github.com/HL7Austria/ELGA-IV-Diabetes-R4 --branch poc repo DEBUG:root:Time to deadline 35879.997655 seconds Cloning into 'repo'... DEBUG:root:running: wget -q https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -O publisher.jar DEBUG:root:Time to deadline 35879.128974 seconds DEBUG:root:running: npm -g install fsh-sushi DEBUG:root:Time to deadline 35878.059209 seconds npm WARN deprecated inflight@1.0.6: This module is not supported, and leaks memory. Do not use it. Check out lru-cache if you want a good and tested way to coalesce async requests by a key value, which is much more comprehensive and powerful. npm WARN deprecated rimraf@2.6.3: Rimraf versions prior to v4 are no longer supported npm WARN deprecated glob@7.2.3: Glob versions prior to v9 are no longer supported added 140 packages in 6s 15 packages are looking for funding run `npm fund` for details npm notice npm notice New major version of npm available! 9.8.1 -> 11.5.2 npm notice Changelog: npm notice Run `npm install -g npm@11.5.2` to update! npm notice DEBUG:root:running: java -Xms19000m -Xmx19000m -jar ../publisher.jar -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7Austria/ELGA-IV-Diabetes-R4/ -out /scratch/repo DEBUG:root:Time to deadline 35872.117717 seconds FHIR IG Publisher Version 2.0.13 (Git# bdf473444570). Built 2025-08-07T03:35:38.89Z (11 days old) Detected Java version: 21-ea from /usr/local/openjdk-21 on Linux/amd64 (64bit). 19008MB available dir = /scratch/repo, path = /usr/local/openjdk-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin Parameters: -ig ig.json -api-key-file /etc/ig.builder.keyfile.ini -fhir-settings /etc/fhir-settings.json -auto-ig-build -tx http://tx.fhir.org -target https://build.fhir.org/ig/HL7Austria/ELGA-IV-Diabetes-R4/ -out /scratch/repo Character encoding = UTF-8 / UTF-8 Start Clock @ Monday, August 18, 2025, 4:05:24 PM Coordinated Universal Time (2025-08-18T16:05:24Z) Build FHIR IG from /scratch/repo (00:00.020 / 00:00.021, 97Mb) API keys loaded from /etc/fhir-settings.json (00:00.002 / 00:00.023, 97Mb) Package Cache: /var/lib/.fhir/packages (00:00.002 / 00:00.025, 97Mb) Found dependency on hl7.at.fhir.core.r4#2.0.0 in Sushi config. Pre-installing (00:00.004 / 00:00.030, 97Mb) Installing hl7.at.fhir.core.r4#2.0.0 to the package cache  Fetching:  Installing hl7.at.fhir.core.r4#2.0.0  done. Found dependency on hl7.at.fhir.elga.aps.r4#current in Sushi config. Pre-installing (00:01.216 / 00:01.247, 56Mb) Installing hl7.at.fhir.elga.aps.r4#current to the package cache  Fetching:  Installing hl7.at.fhir.elga.aps.r4#current  done. Run Sushi on /scratch/repo (00:00.703 / 00:01.950, 104Mb) Sushi: info Running SUSHI v3.16.3 (implements FHIR Shorthand specification v3.0.0) (00:00.563 / 00:02.514, 104Mb) Sushi: info Arguments: (00:00.000 / 00:02.514, 104Mb) Sushi: info --require-latest (00:00.000 / 00:02.514, 104Mb) Sushi: info --out /scratch/repo (00:00.000 / 00:02.515, 104Mb) Sushi: info /scratch/repo (00:00.000 / 00:02.515, 104Mb) Sushi: info Using configuration file: /scratch/repo/sushi-config.yaml (00:00.618 / 00:03.133, 104Mb) Sushi: info Importing FSH text... (00:00.113 / 00:03.247, 104Mb) Sushi: info Preprocessed 16 documents with 89 aliases. (00:00.577 / 00:03.824, 104Mb) Sushi: info Imported 1 definitions and 305 instances. (00:00.076 / 00:03.901, 104Mb) Sushi: info Loaded virtual package sushi-r5forR4#1.0.0 with 7 resources (00:00.094 / 00:03.995, 104Mb) Sushi: info Resolved hl7.fhir.uv.tools.r4#latest to concrete version 0.8.0 (00:00.630 / 00:04.626, 104Mb) Sushi: info Attempting to download hl7.fhir.uv.tools.r4#0.8.0 from https://packages.fhir.org/hl7.fhir.uv.tools.r4/0.8.0 (00:00.000 / 00:04.627, 104Mb) Sushi: info Downloaded hl7.fhir.uv.tools.r4#0.8.0 (00:00.828 / 00:05.455, 104Mb) Sushi: info Cached hl7.fhir.uv.tools.r4#0.8.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.tools.r4#0.8.0 (00:00.002 / 00:05.458, 104Mb) Sushi: info Loaded hl7.fhir.uv.tools.r4#0.8.0 with 110 resources (00:00.062 / 00:05.520, 104Mb) Sushi: info Resolved hl7.terminology.r4#latest to concrete version 6.5.0 (00:00.447 / 00:05.968, 112Mb) Sushi: info Attempting to download hl7.terminology.r4#6.5.0 from https://packages.fhir.org/hl7.terminology.r4/6.5.0 (00:00.000 / 00:05.968, 112Mb) Sushi: info Downloaded hl7.terminology.r4#6.5.0 (00:02.409 / 00:08.377, 112Mb) Sushi: info Cached hl7.terminology.r4#6.5.0 to /home/fhiruser/.fhir/packages/hl7.terminology.r4#6.5.0 (00:00.001 / 00:08.378, 112Mb) Sushi: info Loaded hl7.terminology.r4#6.5.0 with 4392 resources (00:01.223 / 00:09.602, 112Mb) Sushi: info Resolved hl7.fhir.uv.extensions.r4#latest to concrete version 5.2.0 (00:00.441 / 00:10.043, 112Mb) Sushi: info Attempting to download hl7.fhir.uv.extensions.r4#5.2.0 from https://packages.fhir.org/hl7.fhir.uv.extensions.r4/5.2.0 (00:00.000 / 00:10.044, 112Mb) Sushi: info Downloaded hl7.fhir.uv.extensions.r4#5.2.0 (00:01.282 / 00:11.326, 112Mb) Sushi: info Cached hl7.fhir.uv.extensions.r4#5.2.0 to /home/fhiruser/.fhir/packages/hl7.fhir.uv.extensions.r4#5.2.0 (00:00.001 / 00:11.327, 112Mb) Sushi: info Loaded hl7.fhir.uv.extensions.r4#5.2.0 with 759 resources (00:00.305 / 00:11.633, 112Mb) Sushi: info Loaded hl7.at.fhir.core.r4#2.0.0 with 12 resources (00:00.010 / 00:11.643, 112Mb) Sushi: info Loaded hl7.at.fhir.elga.aps.r4#current with 42 resources (00:00.094 / 00:11.737, 112Mb) Sushi: info Attempting to download hl7.fhir.r4.core#4.0.1 from https://packages.fhir.org/hl7.fhir.r4.core/4.0.1 (00:00.000 / 00:11.737, 112Mb) Sushi: info Downloaded hl7.fhir.r4.core#4.0.1 (00:02.876 / 00:14.614, 112Mb) Sushi: info Cached hl7.fhir.r4.core#4.0.1 to /home/fhiruser/.fhir/packages/hl7.fhir.r4.core#4.0.1 (00:00.002 / 00:14.616, 112Mb) Sushi: info Loaded hl7.fhir.r4.core#4.0.1 with 4581 resources (00:01.129 / 00:15.746, 112Mb) Sushi: info Found 1 non-JSON / non-XML file(s) in directory: /scratch/repo/input/extensions. Only resource files with JSON or XML extensions are supported. To see the skipped files in the logs, use debug logging. (00:00.011 / 00:15.757, 112Mb) Sushi: info Loaded virtual package sushi-local#LOCAL with 0 resources (00:00.000 / 00:15.757, 112Mb) Sushi: info Converting FSH to FHIR resources... (00:00.018 / 00:15.776, 112Mb) Sushi: info Converted 1 FHIR ValueSets. (00:00.161 / 00:15.938, 112Mb) Sushi: info Converted 305 FHIR instances. (00:21.506 / 00:37.444, 112Mb) Sushi: info Exporting FHIR resources as JSON... (00:00.000 / 00:37.444, 112Mb) Sushi: info Exported 14 FHIR resources as JSON. (00:00.021 / 00:37.466, 112Mb) Sushi: info Assembling Implementation Guide sources... (00:00.001 / 00:37.467, 112Mb) Sushi: warn Files not in the supported file types (.md and .xml) were detected. These files will be included without any processing. (00:00.031 / 00:37.499, 112Mb) Sushi: File: /scratch/repo/input/pagecontent (00:00.000 / 00:37.499, 112Mb) Sushi: info Generated ImplementationGuide-hl7.at.fhir.elga.iv.diab.json (00:00.003 / 00:37.503, 112Mb) Sushi: info Assembled Implementation Guide sources; ready for IG Publisher. (00:00.000 / 00:37.503, 112Mb) Sushi: ========================= SUSHI RESULTS =========================== (00:00.001 / 00:37.505, 112Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:37.505, 112Mb) Sushi: | | Profiles | Extensions | Logicals | Resources | | (00:00.000 / 00:37.505, 112Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:37.505, 112Mb) Sushi: | | 0 | 0 | 0 | 0 | | (00:00.000 / 00:37.505, 112Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:37.505, 112Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:37.506, 112Mb) Sushi: | | ValueSets | CodeSystems | Instances | | (00:00.000 / 00:37.506, 112Mb) Sushi: | |-------------------------------------------------------------| | (00:00.000 / 00:37.506, 112Mb) Sushi: | | 1 | 0 | 305 | | (00:00.000 / 00:37.506, 112Mb) Sushi: | ------------------------------------------------------------- | (00:00.000 / 00:37.506, 112Mb) Sushi: | | (00:00.000 / 00:37.506, 112Mb) Sushi: =================================================================== (00:00.000 / 00:37.506, 112Mb) Sushi: | Are you in a no-wind situation? 0 Errors 1 Warning | (00:00.000 / 00:37.506, 112Mb) Sushi: =================================================================== (00:00.000 / 00:37.507, 112Mb) Root directory: /scratch/repo (00:00.028 / 00:37.535, 112Mb) Unable to load IG as an r5 IG - try R4 (property code is a class com.google.gson.JsonPrimitive looking for an object) (00:00.506 / 00:38.042, 64Mb) Load Template from hl7.at.fhir.template#current (00:00.419 / 00:38.461, 65Mb) Installing hl7.at.fhir.template#current to the package cache  Fetching:  Installing hl7.at.fhir.template#current  done.  Load Template from fhir.base.template#current (00:00.181 / 00:38.642, 65Mb) Installing fhir.base.template#current to the package cache  Fetching:  Installing fhir.base.template#current  done. Terminology Cache is at /scratch/repo/input-cache/txcache. Trimming now (00:02.853 / 00:41.495, 352Mb) Core Package hl7.fhir.r4.core#4.0.1 (00:00.000 / 00:41.496, 352Mb) Running Terminology Log: /tmp/ohfu-fhir-ig-14563586951075511177.html Connect to Terminology Server at http://tx.fhir.org (00:21.270 / 01:02.766, 198Mb) Installing hl7.fhir.pubpack#0.2.3 to the package cache  Fetching:  Installing hl7.fhir.pubpack#0.2.3  done. Load Package hl7.fhir.pubpack#0.2.3 Installing hl7.fhir.xver-extensions#0.1.0 to the package cache  Fetching:  Installing hl7.fhir.xver-extensions#0.1.0  done. Load Package hl7.fhir.xver-extensions#0.1.0 Load Package hl7.terminology.r4#6.5.0 Load Package hl7.fhir.uv.extensions.r4#5.2.0 Installing hl7.terminology.r4#6.2.0 to the package cache  Fetching:  Installing hl7.terminology.r4#6.2.0  done. Load Package hl7.terminology.r4#6.2.0 Installing hl7.fhir.uv.extensions.r4#5.1.0 to the package cache  Fetching:  Installing hl7.fhir.uv.extensions.r4#5.1.0  done. Load Package hl7.fhir.uv.extensions.r4#5.1.0 Load Package hl7.at.fhir.core.r4#2.0.0 Installing hl7.fhir.uv.ips#current to the package cache  Fetching:  Installing hl7.fhir.uv.ips#current  done. Installing hl7.fhir.uv.extensions.r4#5.3.0-ballot-tc1 to the package cache  Fetching:  Installing hl7.fhir.uv.extensions.r4#5.3.0-ballot-tc1  done. Load Package hl7.fhir.uv.extensions.r4#5.3.0-ballot-tc1 Load Package hl7.fhir.uv.ips#current Installing hl7.fhir.uv.ipa#1.1.0 to the package cache  Fetching:  Installing hl7.fhir.uv.ipa#1.1.0  done. Installing hl7.fhir.uv.smart-app-launch#2.0.0 to the package cache  Fetching:  Installing hl7.fhir.uv.smart-app-launch#2.0.0  done. Load Package hl7.fhir.uv.smart-app-launch#2.0.0 Load Package hl7.fhir.uv.ipa#1.1.0 Load Package hl7.at.fhir.elga.aps.r4#current Installing hl7.fhir.uv.tools.r4#0.7.1 to the package cache  Fetching:  Installing hl7.fhir.uv.tools.r4#0.7.1  done. Load Package hl7.fhir.uv.tools.r4#0.7.1 Load R5 Specials Installing hl7.fhir.r5.core#5.0.0 to the package cache  Fetching:  Installing hl7.fhir.r5.core#5.0.0  done. Initialization complete (00:14.853 / 01:17.619, 1Gb) Load IG (00:00.000 / 01:17.620, 1Gb) Load Content (00:00.000 / 01:17.620, 1Gb) Using en-US as the default narrative language. (no language information in Implementation Guide) (00:00.093 / 01:17.714, 1Gb) Process Loaded Resources (00:01.041 / 01:18.755, 507Mb) Generating Snapshots (00:00.309 / 01:19.065, 579Mb) loadPrePages from FetchedFile[/scratch/repo/fsh-generated/includes] as /scratch/repo/fsh-generated/includes loadPrePages from FetchedFile[/scratch/repo/input/pagecontent] as /scratch/repo/input/pagecontent Signing Certificate: RSA key for Subject: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us from: OU=IG Publisher, L=Ann Arbor, CN=hl7.org, O=HL7, ST=Missouri, C=us Fetch https://fhir.hl7.at/elga-iv-diabetes-r4/package-list.json for version check (00:00.054 / 01:19.119, 579Mb) Processing Conformance Resources (00:00.221 / 01:19.341, 587Mb) Checking Language (00:00.000 / 01:19.341, 587Mb) Load Dependency Info (00:00.000 / 01:19.341, 587Mb) Load Info (00:00.001 / 01:19.342, 587Mb) Load Paths (00:00.000 / 01:19.343, 587Mb) Check R4 / R4B (00:00.000 / 01:19.343, 592Mb) Assign Comparison Ids (00:00.050 / 01:19.394, 603Mb) Propagating status (00:00.000 / 01:19.394, 603Mb) Generating Narratives (00:00.000 / 01:19.394, 603Mb) Validating Conformance Resources (00:03.138 / 01:22.533, 1Gb) Error fetching https://packages2.fhir.org/packages/hl7.at.fhir.elga.aps.r4: Not Found Error fetching https://packages2.fhir.org/packages/hl7.at.fhir.elga.aps.r4: Not Found Failed to determine latest version of package hl7.at.fhir.elga.aps.r4 from server: https://packages2.fhir.org/packages Error fetching https://packages.fhir.org/hl7.at.fhir.elga.aps.r4: Not Found Failed to determine latest version of package hl7.at.fhir.elga.aps.r4 from server: https://packages.fhir.org Failed to determine latest version of package hl7.at.fhir.elga.aps.r4 from server: build.fhir.org Latest version of package hl7.at.fhir.elga.aps.r4 found locally is current - using that Check profiles & code systems (00:04.047 / 01:26.580, 1Gb) Check realm rules (00:00.000 / 01:26.580, 1Gb) Previous Version Comparison (00:00.000 / 01:26.581, 1Gb) Checking for Bundles to sign (00:00.015 / 01:26.596, 1Gb) Validating Resources (00:00.000 / 01:26.596, 1Gb) Processing Provenance Records (00:26.678 / 01:53.275, 3Gb) Generating Outputs in /scratch/repo/output (00:00.000 / 01:53.275, 3Gb) Generate Native Outputs (00:00.170 / 01:53.446, 3Gb) Run Template (00:01.410 / 01:54.857, 3Gb) Generate HTML Outputs (00:01.009 / 01:55.867, 3Gb) XSLT Error: Error reported by XML parser: Content is not allowed in prolog. Exception generating xslt page /scratch/repo/temp/pages/_includes/mappings._md for _includes/mappings._md in /scratch/repo/temp/pages: org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; Content is not allowed in prolog. (00:02.531 / 01:58.398, 731Mb) Generate Spreadsheets (00:00.002 / 01:58.401, 731Mb) Generate Summaries (00:00.000 / 01:58.401, 731Mb) Generating Summary Outputs (00:00.000 / 01:58.401, 731Mb) DB Cumulative Time invested: 00:00:00.224 Sending Usage Stats to Server (00:09.828 / 02:08.230, 1Gb) ## Memory (MB): Use = 1046, Free = 17961, Total = 19008, Max = 19008 (00:00.005 / 02:08.235, 1Gb) Reclaiming memory... (00:00.000 / 02:08.235, 1Gb) ## Memory (MB): Use = 713, Free = 18294, Total = 19008, Max = 19008 (00:00.445 / 02:08.681, 729Mb) Run jekyll: jekyll build --destination "/scratch/repo/output" (in folder /scratch/repo/temp/pages) (00:00.001 / 02:08.682, 729Mb) Troubleshooting Note: usual cases for Jekyll to fail are: (00:00.000 / 02:08.682, 729Mb) * A failure to produce a fragment that is already logged in the output above (00:00.000 / 02:08.682, 729Mb) * A reference to a manually edited file that hasn't been provided (00:00.000 / 02:08.682, 729Mb) Jekyll: Source: /scratch/repo/temp/pages (00:00.381 / 02:09.064, 746Mb) Jekyll: Generating... (00:00.000 / 02:09.064, 746Mb) Jekyll: done in 0.501 seconds. (00:00.500 / 02:09.565, 746Mb) Checking Output HTML (00:01.042 / 02:10.607, 1Gb) found 685 files (00:00.004 / 02:10.612, 1Gb) ........................................ ........................................ Publishing Content Failed: The