{
  "resourceType" : "Library",
  "id" : "OmopFhirPatientJoin",
  "meta" : {
    "profile" : ["http://hl7.org/fhir/uv/sql-on-fhir/StructureDefinition/SQLQuery"]
  },
  "language" : "en",
  "text" : {
    "status" : "extensions",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n  <table class=\"narrative-table\">\n    <tbody>\n<tr>\n\n\n<th colspan=\"2\" scope=\"row\" class=\"row-header\">Metadata</th>\n\n\n</tr>\n\n<tr>\n\n\n<th scope=\"row\" class=\"row-header\">Title</th>\n\n\n\n<td class=\"content-container\">OMOP/FHIR Patient Match with Diagnoses</td>\n\n\n</tr>\n\n\n\n<tr>\n\n\n<th scope=\"row\" class=\"row-header\">Version</th>\n\n\n\n<td class=\"content-container\">3.0.0-ballot</td>\n\n\n</tr>\n\n\n\n\n\n\n\n  \n<tr>\n\n\n<th scope=\"row\" class=\"row-header\">Identifier</th>\n\n\n\n<td class=\"content-container\">urn:oid:2.16.840.1.113883.4.642.40.77.28.3</td>\n\n\n</tr>\n\n\n\n\n\n\n\n\n\n\n<tr>\n\n\n<th scope=\"row\" class=\"row-header\">Jurisdiction</th>\n\n\n\n<td class=\"content-container\">\n    World\n\n\n</td>\n\n\n</tr>\n\n\n\n\n\n\n\n\n<tr>\n\n\n<th scope=\"row\" class=\"row-header\">Steward (Publisher)</th>\n\n\n\n<td class=\"content-container\">HL7 International / FHIR Infrastructure</td>\n\n\n</tr>\n\n\n\n<tr>\n\n\n<th scope=\"row\" class=\"row-header\">Steward Contact</th>\n\n\n\n<td class=\"content-container\">HL7 International / FHIR Infrastructure</td>\n\n\n</tr>\n\n\n\n\n\n\n\n<tr>\n\n\n<th scope=\"row\" class=\"row-header\">Description</th>\n\n\n\n<td class=\"content-container\"><div><p>Uses labels to disambiguate patient views from different sources and joins\npatient diagnoses for downstream analytics.</p>\n<pre><code class=\"language-sql\">SELECT\n  omop_person.person_id AS omop_person_id,\n  fhir_patient.id AS fhir_patient_id,\n  fhir_patient.name,\n  diagnoses_view.code AS diagnosis_code,\n  diagnoses_view.display AS diagnosis_display\nFROM omop_person\nJOIN fhir_patient\n  ON omop_person.person_id = fhir_patient.mrn\nJOIN diagnoses_view\n  ON diagnoses_view.patient_id = fhir_patient.id\nWHERE omop_person.source_system = :source_system\n</code></pre>\n</div></td>\n\n\n</tr>\n\n\n\n\n\n\n<tr>\n\n\n<th scope=\"row\" class=\"row-header\">Type</th>\n\n\n\n<td class=\"content-container\">\n    sql-query from <a href=\"CodeSystem-LibraryTypesCodes.html\">http://hl7.org/fhir/uv/sql-on-fhir/CodeSystem/LibraryTypesCodes</a> \n\n\n</td>\n\n\n</tr>\n\n\n\n<tr>\n  \n  \n  \n  \n  \n\n<th scope=\"row\" class=\"row-header\">Dependency</th>\n\n\n  \n  \n  <td class=\"content-container\">\n    \n    <em>Description</em>: OMOP Person view\n    \n    <br/>\n    \n    \n    \n    \n    \n    \n    <em>Resource</em>: <code>https://example.org/omop/ViewDefinition/Patient</code>\n    <br/>\n    <em>Canonical URL</em>: <tt>https://example.org/omop/ViewDefinition/Patient</tt>\n    \n    \n    \n  </td>\n</tr>\n\n<tr>\n  \n  \n  \n  \n  \n\n<th scope=\"row\" class=\"row-header\">Dependency</th>\n\n\n  \n  \n  <td class=\"content-container\">\n    \n    <em>Description</em>: FHIR Patient view\n    \n    <br/>\n    \n    \n    \n    \n    \n    \n    <em>Resource</em>: <code>https://example.org/fhir/ViewDefinition/Patient</code>\n    <br/>\n    <em>Canonical URL</em>: <tt>https://example.org/fhir/ViewDefinition/Patient</tt>\n    \n    \n    \n  </td>\n</tr>\n\n<tr>\n  \n  \n  \n  \n  \n\n<th scope=\"row\" class=\"row-header\">Dependency</th>\n\n\n  \n  \n  <td class=\"content-container\">\n    \n    <em>Description</em>: Diagnosis facts view\n    \n    <br/>\n    \n    \n    \n    \n    \n    \n    <em>Resource</em>: <code>https://example.org/ViewDefinition/diagnoses_view</code>\n    <br/>\n    <em>Canonical URL</em>: <tt>https://example.org/ViewDefinition/diagnoses_view</tt>\n    \n    \n    \n  </td>\n</tr>\n\n\n\n\n\n\n\n\n<tr>\n\n\n<th colspan=\"2\" scope=\"row\" class=\"row-header\"><a name=\"parameters\"> </a>Parameters</th>\n\n\n</tr>\n\n<tr>\n  \n\n<th scope=\"row\" class=\"row-header\"/>\n\n\n  <td class=\"content-container\">\n    <table>\n      <thead>\n        <tr>\n          <td><em>Name</em></td>\n          <td><em>Use</em></td>\n          <td><em>Card.</em></td>\n          <td><em>Type</em></td>\n          <td><em>Documentation</em></td>\n        </tr>\n      </thead>\n      <tbody>\n      \n        <tr>\n          <td>source_system</td>\n          <td>In</td>\n          <td>0..1</td>\n          <td>string</td>\n          <td>Source system identifier for OMOP records</td>\n        </tr>\n      \n      </tbody>\n    </table>\n  </td>\n</tr>\n\n\n\n\n\n\n\n  <tr>\n\n\n<th colspan=\"2\" scope=\"row\" class=\"row-header\">Library Content</th>\n\n\n</tr>\n  \n    \n    <tr>\n      <th scope=\"row\" class=\"row-header\">application/sqlContent</th>\n      <td>\n        <pre style=\"border: none;\" class=\"content-container highlight language-cql\"><code>Encoded data </code></pre>\n      </td>\n    </tr>\n    \n  \n\n<tr>\n  <th colspan=\"2\" scope=\"row\" class=\"row-header\">Generated using version 0.5.4 of the sample-content-ig Liquid templates</th>\n</tr>\n\n    </tbody>\n  </table>\n</div>"
  },
  "url" : "http://hl7.org/fhir/uv/sql-on-fhir/Library/OmopFhirPatientJoin",
  "identifier" : [{
    "system" : "urn:ietf:rfc:3986",
    "value" : "urn:oid:2.16.840.1.113883.4.642.40.77.28.3"
  }],
  "version" : "3.0.0-ballot",
  "name" : "OmopFhirPatientJoin",
  "title" : "OMOP/FHIR Patient Match with Diagnoses",
  "status" : "active",
  "type" : {
    "coding" : [{
      "system" : "http://hl7.org/fhir/uv/sql-on-fhir/CodeSystem/LibraryTypesCodes",
      "code" : "sql-query"
    }]
  },
  "date" : "2026-08-13T15:42:34+00:00",
  "publisher" : "HL7 International / FHIR Infrastructure",
  "contact" : [{
    "name" : "HL7 International / FHIR Infrastructure",
    "telecom" : [{
      "system" : "url",
      "value" : "http://www.hl7.org/Special/committees/fiwg"
    }]
  }],
  "description" : "Uses labels to disambiguate patient views from different sources and joins\npatient diagnoses for downstream analytics.\n\n```sql\nSELECT\n  omop_person.person_id AS omop_person_id,\n  fhir_patient.id AS fhir_patient_id,\n  fhir_patient.name,\n  diagnoses_view.code AS diagnosis_code,\n  diagnoses_view.display AS diagnosis_display\nFROM omop_person\nJOIN fhir_patient\n  ON omop_person.person_id = fhir_patient.mrn\nJOIN diagnoses_view\n  ON diagnoses_view.patient_id = fhir_patient.id\nWHERE omop_person.source_system = :source_system\n```",
  "jurisdiction" : [{
    "coding" : [{
      "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
      "code" : "001",
      "display" : "World"
    }]
  }],
  "relatedArtifact" : [{
    "type" : "depends-on",
    "label" : "omop_person",
    "display" : "OMOP Person view",
    "resource" : "https://example.org/omop/ViewDefinition/Patient"
  },
  {
    "type" : "depends-on",
    "label" : "fhir_patient",
    "display" : "FHIR Patient view",
    "resource" : "https://example.org/fhir/ViewDefinition/Patient"
  },
  {
    "type" : "depends-on",
    "label" : "diagnoses_view",
    "display" : "Diagnosis facts view",
    "resource" : "https://example.org/ViewDefinition/diagnoses_view"
  }],
  "parameter" : [{
    "name" : "source_system",
    "use" : "in",
    "documentation" : "Source system identifier for OMOP records",
    "type" : "string"
  }],
  "content" : [{
    "extension" : [{
      "url" : "http://hl7.org/fhir/uv/sql-on-fhir/StructureDefinition/sql-text",
      "valueString" : "SELECT\n  omop_person.person_id AS omop_person_id,\n  fhir_patient.id AS fhir_patient_id,\n  fhir_patient.name,\n  diagnoses_view.code AS diagnosis_code,\n  diagnoses_view.display AS diagnosis_display\nFROM omop_person\nJOIN fhir_patient\n  ON omop_person.person_id = fhir_patient.mrn\nJOIN diagnoses_view\n  ON diagnoses_view.patient_id = fhir_patient.id\nWHERE omop_person.source_system = :source_system"
    }],
    "contentType" : "application/sql",
    "data" : "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"
  }]
}