0.4.6 - ci-build

StandardPatientHealthRecordIG, published by MITRE. This guide is not an authorized publication; it is the continuous build for version 0.4.6 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/personal-health-record-format-ig/ and changes regularly. See the Directory of published versions

Physiology Simulations

Recurring challenges with designing PHR apps include figuring out which data to include (all of it? just the hospital data? fitness data?) and then finding suitable test data. This implementation guide does not purport to provide algorithms or workflows for every medical category. However, we can reference the Synthea synthetic data generator, and recommend that PHR developers use it’s algorithms for generating sample data for various medical conditions.

./Tutorial-Dermatogram.jpg

Medical Domains

Domain Value Sets File Types Avg. File Size Frequency Diagnostic Algorithm
Genomics Sequence Type
Human Chromosome
FASTQ, BAM, VCFs ~1TB   Pharmacogenenomics
Personalized Medicine
Radiology AcquisitionModality
Laterality
SNOMED CT Body Structures
DICOM, JPG ~1GB per study Surgical Planning
Autosegmentation
Medication Dosage
Embryology   PDF ~100KB    
Dermatology     ~2MB    
Endocrinology     ~100KB    
Pediatrics     ~100KB    
Metabolism & Biometrics     ~100KB    
Neurology     ~100KB    
Cardiology & Hemodynamics     ~5GB    
Pulmonology          
Kinesthesiology          
Immunology     ~100KB    
Virology (COVID19)     ~20KB    
Gastroenterology     ~4GB    
Obstetrics     ~100MB    
Pregnancy     ~100MB    
Gynocology          
Andrology          
Urology          
Healthy Aging          
Hospice Care          

Synthetic Data Generator Installation

# download synthea
git clone https://github.com/synthetichealth/synthea

# go into the cloned directory
cd synthea

# build the app
./gradlew build check test

References

SyntheaTM Patient Generator
Simulacres Et Simulation - Jean Baudrillard