Molecular Definition Implementation Guide for Molecular Data Types
1.0.0-ballot1 - ci-build International flag

Molecular Definition Implementation Guide for Molecular Data Types, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/molecular-definition-data-types/ and changes regularly. See the Directory of published versions

ValueSet: Nucleotide DNA 1-letter Ambiguous Symbols ValueSet

Official URL: http://hl7.org/fhir/uv/molecular-definition-data-types/ValueSet/nucleotide-dna-1letter-ambiguous Version: 1.0.0-ballot1
Standards status: Draft Maturity Level: 0 Computable Name: NucleotideDNA1LetterAmbiguous

Single-letter ambiguous symbols for DNA residues.

References

This value set is not used here; it may be used elsewhere (e.g. specifications and/or implementations that use this content)

Logical Definition (CLD)

  • Include these codes as defined in http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna version 📦1.0.0-ballot1
    CodeDisplayDefinition
    GGuanineG
    AAdenineA
    TThymineT
    CCytosineC
    RPurineG or A
    YPyrimidineT or C
    MAminoA or C
    KKetoG or T
    SStrong interaction (3 H bonds)G or C
    WWeak interaction (2 H bonds)A or T
    Hnot-G, H follows G in the alphabetA or C or T
    Bnot-A, B follows AG or T or C
    Vnot-T (not-U), V follows UG or C or A
    Dnot-C, D follows CG or A or T
    NAny nucleotideG or A or T or C

 

Expansion

Expansion performed internally based on codesystem Nucleotide DNA Symbols v1.0.0-ballot1 (CodeSystem)

This value set contains 15 concepts

SystemCodeDisplay (en)JSONXML
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  GGuanine
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  AAdenine
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  TThymine
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  CCytosine
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  RPurine
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  YPyrimidine
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  MAmino
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  KKeto
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  SStrong interaction (3 H bonds)
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  WWeak interaction (2 H bonds)
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  Hnot-G, H follows G in the alphabet
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  Bnot-A, B follows A
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  Vnot-T (not-U), V follows U
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  Dnot-C, D follows C
http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/nucleotide-dna  NAny nucleotide

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code