Molecular Definition Implementation Guide for Molecular Data Types
1.0.0-ballot1 - ci-build International flag

Molecular Definition Implementation Guide for Molecular Data Types, published by HL7 International / Clinical Genomics. This guide is not an authorized publication; it is the continuous build for version 1.0.0-ballot1 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/molecular-definition-data-types/ and changes regularly. See the Directory of published versions

CodeSystem: Normalization Method

Official URL: http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/normalization-method Version: 1.0.0-ballot1
Standards status: Draft Maturity Level: 0 Computable Name: NormalizationMethod

Methods for normalizing sequence variants

This Code system is referenced in the content logical definition of the following value sets:

This case-sensitive code system http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/normalization-method defines the following codes:

CodeDisplayDefinition
left-shift Left shift Variant coordinates normalized by shifting bases to the left, as per VCF specifications
right-shift Right shift Variant coordinates normalized by shifting bases to the right, as per HGVS specifications
fully-justified Fully justified Variant coordinates normalized by full justification, as per VOCA specifications