@prefix fhir: <http://hl7.org/fhir/> .
@prefix loinc: <https://loinc.org/rdf/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/uv/genomics-reporting/Parameters/FindSubjectHaplotypesOutput> a fhir:Parameters ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "FindSubjectHaplotypesOutput"] ; # 
  fhir:parameter ( [
     fhir:name [ fhir:v "haplotypes" ] ;
     fhir:part ( [
       fhir:name [ fhir:v "geneItem" ] ;
       fhir:value [
         a fhir:String ;
         fhir:v "http://www.genenames.org|HGNC:2625"
       ]
     ] [
       fhir:name [ fhir:v "genotype" ] ;
       fhir:Parameters.parameter.resource ( [
         a fhir:Observation ;
         fhir:id [ fhir:v "GenotypeCYP2D6" ] ;
         fhir:meta [
           fhir:profile ( [
             fhir:v "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype"^^xsd:anyURI ;
             fhir:l <http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype>
           ] )
         ] ;
         fhir:text [
           fhir:status [ fhir:v "generated" ] ;
           fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\">Genotype</div>"^^rdf:XMLLiteral ]
         ] ;
         fhir:status [ fhir:v "final" ] ;
         fhir:category ( [
           fhir:coding ( [
             fhir:system [
               fhir:v "http://terminology.hl7.org/CodeSystem/observation-category"^^xsd:anyURI ;
               fhir:l <http://terminology.hl7.org/CodeSystem/observation-category>
             ] ;
             fhir:code [ fhir:v "laboratory" ]
           ] )
         ] [
           fhir:coding ( [
             fhir:system [
               fhir:v "http://terminology.hl7.org/CodeSystem/v2-0074"^^xsd:anyURI ;
               fhir:l <http://terminology.hl7.org/CodeSystem/v2-0074>
             ] ;
             fhir:code [ fhir:v "GE" ]
           ] )
         ] ) ;
         fhir:code [
           fhir:coding ( [
             a loinc:84413-4 ;
             fhir:system [
               fhir:v "http://loinc.org"^^xsd:anyURI ;
               fhir:l <http://loinc.org>
             ] ;
             fhir:code [ fhir:v "84413-4" ] ;
             fhir:display [ fhir:v "Genotype display name" ]
           ] )
         ] ;
         fhir:subject [
           fhir:l <http://hl7.org/fhir/uv/genomics-reporting/Patient/CGPatientExample01> ;
           fhir:reference [ fhir:v "Patient/CGPatientExample01" ]
         ] ;
         fhir:effective [
           a fhir:DateTime ;
           fhir:v "2023-07-01"^^xsd:date
         ] ;
         fhir:performer ( [
           fhir:l <http://hl7.org/fhir/uv/genomics-reporting/Organization/ExampleOrg> ;
           fhir:reference [ fhir:v "Organization/ExampleOrg" ]
         ] ) ;
         fhir:value [
           a fhir:CodeableConcept ;
           fhir:coding ( [
             fhir:system [
               fhir:v "http://www.pharmvar.org"^^xsd:anyURI ;
               fhir:l <http://www.pharmvar.org>
             ] ;
             fhir:code [ fhir:v "CYP2D6_*1/*1" ] ;
             fhir:display [ fhir:v "CYP2D6 *1/*1" ]
           ] )
         ] ;
         fhir:specimen [
           fhir:l <http://hl7.org/fhir/uv/genomics-reporting/Specimen/GenomicSpecimenExample01> ;
           fhir:reference [ fhir:v "Specimen/GenomicSpecimenExample01" ]
         ] ;
         fhir:component ( [
           fhir:code [
             fhir:coding ( [
               a loinc:48018-6 ;
               fhir:system [
                 fhir:v "http://loinc.org"^^xsd:anyURI ;
                 fhir:l <http://loinc.org>
               ] ;
               fhir:code [ fhir:v "48018-6" ] ;
               fhir:display [ fhir:v "Gene studied [ID]" ]
             ] )
           ] ;
           fhir:value [
             a fhir:CodeableConcept ;
             fhir:coding ( [
               fhir:system [
                 fhir:v "http://www.genenames.org"^^xsd:anyURI ;
                 fhir:l <http://www.genenames.org>
               ] ;
               fhir:code [ fhir:v "HGNC:2625" ] ;
               fhir:display [ fhir:v "CYP2D6" ]
             ] )
           ]
         ] )
       ] )
     ] )
  ] [
     fhir:name [ fhir:v "haplotypes" ] ;
     fhir:part ( [
       fhir:name [ fhir:v "geneItem" ] ;
       fhir:value [
         a fhir:String ;
         fhir:v "http://www.genenames.org|HGNC:2621"
       ]
     ] [
       fhir:name [ fhir:v "genotype" ] ;
       fhir:Parameters.parameter.resource ( [
         a fhir:Observation ;
         fhir:id [ fhir:v "GenotypeCYP2C19" ] ;
         fhir:meta [
           fhir:profile ( [
             fhir:v "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype"^^xsd:anyURI ;
             fhir:l <http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype>
           ] )
         ] ;
         fhir:text [
           fhir:status [ fhir:v "generated" ] ;
           fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\">Genotype</div>"^^rdf:XMLLiteral ]
         ] ;
         fhir:status [ fhir:v "final" ] ;
         fhir:category ( [
           fhir:coding ( [
             fhir:system [
               fhir:v "http://terminology.hl7.org/CodeSystem/observation-category"^^xsd:anyURI ;
               fhir:l <http://terminology.hl7.org/CodeSystem/observation-category>
             ] ;
             fhir:code [ fhir:v "laboratory" ]
           ] )
         ] [
           fhir:coding ( [
             fhir:system [
               fhir:v "http://terminology.hl7.org/CodeSystem/v2-0074"^^xsd:anyURI ;
               fhir:l <http://terminology.hl7.org/CodeSystem/v2-0074>
             ] ;
             fhir:code [ fhir:v "GE" ]
           ] )
         ] ) ;
         fhir:code [
           fhir:coding ( [
             a loinc:84413-4 ;
             fhir:system [
               fhir:v "http://loinc.org"^^xsd:anyURI ;
               fhir:l <http://loinc.org>
             ] ;
             fhir:code [ fhir:v "84413-4" ] ;
             fhir:display [ fhir:v "Genotype display name" ]
           ] )
         ] ;
         fhir:subject [
           fhir:l <http://hl7.org/fhir/uv/genomics-reporting/Patient/CGPatientExample01> ;
           fhir:reference [ fhir:v "Patient/CGPatientExample01" ]
         ] ;
         fhir:effective [
           a fhir:DateTime ;
           fhir:v "2023-07-01"^^xsd:date
         ] ;
         fhir:performer ( [
           fhir:l <http://hl7.org/fhir/uv/genomics-reporting/Organization/ExampleOrg> ;
           fhir:reference [ fhir:v "Organization/ExampleOrg" ]
         ] ) ;
         fhir:value [
           a fhir:CodeableConcept ;
           fhir:coding ( [
             fhir:system [
               fhir:v "http://www.pharmvar.org"^^xsd:anyURI ;
               fhir:l <http://www.pharmvar.org>
             ] ;
             fhir:code [ fhir:v "CYP2C19_*1/*2" ] ;
             fhir:display [ fhir:v "CYP2C19 *1/*2" ]
           ] )
         ] ;
         fhir:specimen [
           fhir:l <http://hl7.org/fhir/uv/genomics-reporting/Specimen/GenomicSpecimenExample01> ;
           fhir:reference [ fhir:v "Specimen/GenomicSpecimenExample01" ]
         ] ;
         fhir:component ( [
           fhir:code [
             fhir:coding ( [
               a loinc:48018-6 ;
               fhir:system [
                 fhir:v "http://loinc.org"^^xsd:anyURI ;
                 fhir:l <http://loinc.org>
               ] ;
               fhir:code [ fhir:v "48018-6" ] ;
               fhir:display [ fhir:v "Gene studied [ID]" ]
             ] )
           ] ;
           fhir:value [
             a fhir:CodeableConcept ;
             fhir:coding ( [
               fhir:system [
                 fhir:v "http://www.genenames.org"^^xsd:anyURI ;
                 fhir:l <http://www.genenames.org>
               ] ;
               fhir:code [ fhir:v "HGNC:2621" ] ;
               fhir:display [ fhir:v "CYP2C19" ]
             ] )
           ]
         ] )
       ] )
     ] )
  ] ) . # 

<http://hl7.org/fhir/uv/genomics-reporting/Patient/CGPatientExample01> a fhir:Uv .

<http://hl7.org/fhir/uv/genomics-reporting/Organization/ExampleOrg> a fhir:Uv .

<http://hl7.org/fhir/uv/genomics-reporting/Specimen/GenomicSpecimenExample01> a fhir:Uv .

# -------------------------------------------------------------------------------------