SMART Health Cards: Vaccination & Testing Implementation Guide, published by HL7 International / Public Health. This guide is not an authorized publication; it is the continuous build for version 1.0.0 built by the FHIR (HL7® FHIR® Standard) CI Build. This version is based on the current content of https://github.com/HL7/fhir-shc-vaccination-ig/ and changes regularly. See the Directory of published versions
Official URL: http://hl7.org/fhir/uv/shc-vaccination/ValueSet/lab-qualitative-test-covid | Version: 1.0.0 | |||
Standards status: Trial-use | Maturity Level: 4 | Computable Name: LabQualitativeTestCovidValueSet | ||
Copyright/Legal: This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2022, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc |
This value set includes a subset of the LOINCs found at https://loinc.org/sars-cov-2-and-covid-19/ that identify COVID-19-related laboratory tests. Only those laboratory tests that include qualitative results we believe to be useful in SMART Health Cards are included.qualitative results we believe to be useful in SMART Health Cards are included.
References
http://loinc.org
Code | Display |
94307-6 | SARS-CoV-2 N gene Spec Ql NAA N1 |
94308-4 | SARS-CoV-2 N gene Spec Ql NAA N2 |
94309-2 | SARS-CoV-2 RNA Spec Ql NAA+probe |
94310-0 | SARS-related CoV N Spec Ql NAA N3 |
94314-2 | SARS-CoV-2 RdRp Spec Ql NAA+probe |
94315-9 | SARS-rel CoV E gene Spec Ql NAA+probe |
94316-7 | SARS-CoV-2 N gene Spec Ql NAA+probe |
94500-6 | SARS-CoV-2 RNA Resp Ql NAA+probe |
94502-2 | SARS-rel CoV RNA Resp Ql NAA+probe |
94507-1 | SARS-CoV-2 IgG SerPlBld Ql IA.rapid |
94508-9 | SARS-CoV-2 IgM SerPlBld Ql IA.rapid |
94532-9 | SARS-rel CoV+MERS RNA Resp Ql NAA+probe |
94533-7 | SARS-CoV-2 N gene Resp Ql NAA+probe |
94534-5 | SARS-CoV-2 RdRp Resp Ql NAA+probe |
94547-7 | SARS-CoV-2 IgG+IgM SerPl Ql IA |
94558-4 | SARS-CoV-2 Ag Resp Ql IA.rapid |
94559-2 | SARS-CoV-2 ORF1ab Resp Ql NAA+probe |
94562-6 | SARS-CoV-2 IgA SerPl Ql IA |
94563-4 | SARS-CoV-2 IgG SerPl Ql IA |
94564-2 | SARS-CoV-2 IgM SerPl Ql IA |
94565-9 | SARS-CoV-2 RNA Nph Ql NAA+non-probe |
94639-2 | SARS-CoV-2 ORF1ab Spec Ql NAA+probe |
94640-0 | SARS-CoV-2 S gene Resp Ql NAA+probe |
94641-8 | SARS-CoV-2 S gene Spec Ql NAA+probe |
94647-5 | SARSr-CoV RNA Spec Ql NAA+probe |
94660-8 | SARS-CoV-2 RNA SerPl Ql NAA+probe |
94756-4 | SARS-CoV-2 N gene Resp Ql NAA N1 |
94757-2 | SARS-CoV-2 N gene Resp Ql NAA N2 |
94758-0 | SARS-rel CoV E gene Resp Ql NAA+probe |
94759-8 | SARS-CoV-2 RNA Nph Ql NAA+probe |
94760-6 | SARS-CoV-2 N gene Nph Ql NAA+probe |
94761-4 | SARS-CoV-2 IgG DBS Ql IA |
94762-2 | SARS-CoV-2 Ab SerPl Ql IA |
94763-0 | SARS-CoV-2 Spec Ql Cult |
94765-5 | SARS-rel CoV E gene SerPl Ql NAA+probe |
94766-3 | SARS-CoV-2 N gene SerPl Ql NAA+probe |
94767-1 | SARS-CoV-2 S gene SerPl Ql NAA+probe |
94768-9 | SARS-CoV-2 IgA SerPlBld Ql IA.rapid |
94822-4 | SARS-CoV-2 RNA Sal Ql Seq |
94845-5 | SARS-CoV-2 RNA Sal Ql NAA+probe |
95125-1 | SARS-CoV-2 IgA+IgM SerPl Ql IA |
95209-3 | SARS-CoV+SARS-CoV-2 Ag Resp Ql IA.rapid |
95406-5 | SARS-CoV-2 RNA Nose Ql NAA+probe |
95409-9 | SARS-CoV-2 N gene Nose Ql NAA+probe |
95411-5 | SARS-CoV-2 NAb Ser Ql pVNT |
95416-4 | SARS-CoV-2 IgM DBS Ql IA |
95423-0 | FLUABV + SARS-CoV-2 Resp NAA+probe |
95424-8 | SARS-CoV-2 RNA Resp Ql Seq |
95425-5 | SARS-CoV-2 N gene Sal Ql NAA+probe |
95542-7 | SARS-CoV-2 Ab SerPlBld Ql IA.rapid |
95608-6 | SARS-CoV-2 RNA Resp Ql NAA+non-probe |
95609-4 | SARS-CoV-2 S gene Resp Ql Seq |
95823-1 | SARS-rel CoV E gene Sal Ql NAA+probe |
95824-9 | SARS-CoV-2 ORF1ab Sal Ql NAA+probe |
95825-6 | SARS-CoV-2 Ab DBS Ql IA |
95970-0 | SARS-CoV-2 TCRB Bld Ql Seq |
95971-8 | SARS-CoV-2 IFN-g Bld Ql |
96091-4 | SARS-CoV-2 RdRp Sal Ql NAA+probe |
96119-3 | SARS-CoV-2 Ag Upper resp Ql IA |
96120-1 | SARS-CoV-2 RdRp Lower resp Ql NAA+probe |
96121-9 | SARS-rel CoV E gene Low resp Ql NAA+prb |
96122-7 | SARS-rel CoV E gene Upper resp Ql NAA+prb |
96123-5 | SARS-CoV-2 RdRp Upper resp Ql NAA+probe |
96448-6 | SARS-CoV-2 N gene Sal Ql NAA N1 |
96603-6 | SARS-CoV-2 S RBD NAb SerPl Ql sVNT |
96752-1 | SARS-CoV-2 S gene mut Spec Ql |
96763-8 | SARS-CoV-2 E gene Resp Ql NAA+probe |
96765-3 | SARS-CoV-2 S gene Sal Ql NAA+probe |
96797-6 | SARS-CoV-2 RNA OPA wash Ql NAA+probe |
96829-7 | SARS-CoV-2 RNA Spec Donr Ql NAA+probe |
96957-6 | SARS-CoV-2 M gene Upper resp Ql NAA+prb |
96958-4 | SARS-CoV-2 N gene Sal Ql NAA N2 |
96986-5 | SARS-CoV-2 N gene Nose Ql NAA+non-probe |
97097-0 | SARS-CoV-2 Ag Upper resp Ql IA.rapid |
97098-8 | SARS-CoV-2 Nsp2 Upper resp Ql NAA+probe |
98069-8 | SARS-CoV-2 Ab Sal Ql IA.rapid |
98131-6 | SARS-CoV-2 ORF1b Resp Ql NAA+probe |
98132-4 | SARS-CoV-2 ORF1a Resp Ql NAA+probe |
98493-0 | SARS-CoV-2 ORF1b Sal Ql NAA+probe |
98494-8 | SARS-CoV-2 ORF1a Sal Ql NAA+probe |
99596-9 | SARS-CoV-2 N IgG SerPl Ql IA |
99597-7 | SARS-CoV-2 S IgG SerPl Ql IA |
99772-6 | SARS-CoV-2 IFN-g Bld-Imp |
Expansion from tx.fhir.org based on Loinc v2.81
This value set contains 83 concepts
Code | System | Display |
94307-6 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N1 |
94308-4 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N2 |
94309-2 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen by NAA with probe detection |
94310-0 | http://loinc.org | SARS-related coronavirus N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N3 |
94314-2 | http://loinc.org | SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Specimen by NAA with probe detection |
94315-9 | http://loinc.org | SARS-related coronavirus E gene [Presence] in Specimen by NAA with probe detection |
94316-7 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by NAA with probe detection |
94500-6 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection |
94502-2 | http://loinc.org | SARS-related coronavirus RNA [Presence] in Respiratory system specimen by NAA with probe detection |
94507-1 | http://loinc.org | SARS-CoV-2 (COVID-19) IgG Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay |
94508-9 | http://loinc.org | SARS-CoV-2 (COVID-19) IgM Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay |
94532-9 | http://loinc.org | SARS-related coronavirus+MERS coronavirus RNA [Presence] in Respiratory system specimen by NAA with probe detection |
94533-7 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory system specimen by NAA with probe detection |
94534-5 | http://loinc.org | SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory system specimen by NAA with probe detection |
94547-7 | http://loinc.org | SARS-CoV-2 (COVID-19) IgG+IgM Ab [Presence] in Serum or Plasma by Immunoassay |
94558-4 | http://loinc.org | SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory system specimen by Rapid immunoassay |
94559-2 | http://loinc.org | SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory system specimen by NAA with probe detection |
94562-6 | http://loinc.org | SARS-CoV-2 (COVID-19) IgA Ab [Presence] in Serum or Plasma by Immunoassay |
94563-4 | http://loinc.org | SARS-CoV-2 (COVID-19) IgG Ab [Presence] in Serum or Plasma by Immunoassay |
94564-2 | http://loinc.org | SARS-CoV-2 (COVID-19) IgM Ab [Presence] in Serum or Plasma by Immunoassay |
94565-9 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with non-probe detection |
94639-2 | http://loinc.org | SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Specimen by NAA with probe detection |
94640-0 | http://loinc.org | SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory system specimen by NAA with probe detection |
94641-8 | http://loinc.org | SARS-CoV-2 (COVID-19) S gene [Presence] in Specimen by NAA with probe detection |
94647-5 | http://loinc.org | SARS-related coronavirus RNA [Presence] in Specimen by NAA with probe detection |
94660-8 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Serum or Plasma by NAA with probe detection |
94756-4 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory system specimen by Nucleic acid amplification using CDC primer-probe set N1 |
94757-2 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory system specimen by Nucleic acid amplification using CDC primer-probe set N2 |
94758-0 | http://loinc.org | SARS-related coronavirus E gene [Presence] in Respiratory system specimen by NAA with probe detection |
94759-8 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection |
94760-6 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Nasopharynx by NAA with probe detection |
94761-4 | http://loinc.org | SARS-CoV-2 (COVID-19) IgG Ab [Presence] in DBS by Immunoassay |
94762-2 | http://loinc.org | SARS-CoV-2 (COVID-19) Ab [Presence] in Serum or Plasma by Immunoassay |
94763-0 | http://loinc.org | SARS-CoV-2 (COVID-19) [Presence] in Specimen by Organism specific culture |
94765-5 | http://loinc.org | SARS-related coronavirus E gene [Presence] in Serum or Plasma by NAA with probe detection |
94766-3 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Serum or Plasma by NAA with probe detection |
94767-1 | http://loinc.org | SARS-CoV-2 (COVID-19) S gene [Presence] in Serum or Plasma by NAA with probe detection |
94768-9 | http://loinc.org | SARS-CoV-2 (COVID-19) IgA Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay |
94822-4 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by Sequencing |
94845-5 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by NAA with probe detection |
95125-1 | http://loinc.org | SARS-CoV-2 (COVID-19) IgA+IgM [Presence] in Serum or Plasma by Immunoassay |
95209-3 | http://loinc.org | SARS-CoV+SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory system specimen by Rapid immunoassay |
95406-5 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Nose by NAA with probe detection |
95409-9 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with probe detection |
95411-5 | http://loinc.org | SARS-CoV-2 (COVID-19) neutralizing antibody [Presence] in Serum by pVNT |
95416-4 | http://loinc.org | SARS-CoV-2 (COVID-19) IgM Ab [Presence] in DBS by Immunoassay |
95423-0 | http://loinc.org | Influenza virus A and B and SARS-CoV-2 (COVID-19) identified in Respiratory system specimen by NAA with probe detection |
95424-8 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by Sequencing |
95425-5 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by NAA with probe detection |
95542-7 | http://loinc.org | SARS-CoV-2 (COVID-19) Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay |
95608-6 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with non-probe detection |
95609-4 | http://loinc.org | SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory system specimen by Sequencing |
95823-1 | http://loinc.org | SARS-related coronavirus E gene [Presence] in Saliva (oral fluid) by NAA with probe detection |
95824-9 | http://loinc.org | SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Saliva (oral fluid) by NAA with probe detection |
95825-6 | http://loinc.org | SARS-CoV-2 (COVID-19) Ab [Presence] in DBS by Immunoassay |
95970-0 | http://loinc.org | SARS-CoV-2 (COVID-19) specific TCRB gene rearrangements [Presence] in Blood by Sequencing |
95971-8 | http://loinc.org | SARS-CoV-2 stimulated gamma interferon [Presence] in Blood |
96091-4 | http://loinc.org | SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Saliva (oral fluid) by NAA with probe detection |
96119-3 | http://loinc.org | SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Immunoassay |
96120-1 | http://loinc.org | SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Lower respiratory specimen by NAA with probe detection |
96121-9 | http://loinc.org | SARS-related coronavirus E gene [Presence] in Lower respiratory specimen by NAA with probe detection |
96122-7 | http://loinc.org | SARS-related coronavirus E gene [Presence] in Upper respiratory specimen by NAA with probe detection |
96123-5 | http://loinc.org | SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Upper respiratory specimen by NAA with probe detection |
96448-6 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N1 |
96603-6 | http://loinc.org | SARS-CoV-2 (COVID-19) S protein RBD neutralizing antibody [Presence] in Serum or Plasma by sVNT |
96752-1 | http://loinc.org | SARS-CoV-2 (COVID-19) S gene mutation [Presence] in Specimen by Molecular genetics method |
96763-8 | http://loinc.org | SARS-CoV-2 (COVID-19) E gene [Presence] in Respiratory system specimen by NAA with probe detection |
96765-3 | http://loinc.org | SARS-CoV-2 (COVID-19) S gene [Presence] in Saliva (oral fluid) by NAA with probe detection |
96797-6 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Oropharyngeal wash by NAA with probe detection |
96829-7 | http://loinc.org | SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen from Donor by NAA with probe detection |
96957-6 | http://loinc.org | SARS-CoV-2 (COVID-19) M gene [Presence] in Upper respiratory specimen by NAA with probe detection |
96958-4 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N2 |
96986-5 | http://loinc.org | SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with non-probe detection |
97097-0 | http://loinc.org | SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Rapid immunoassay |
97098-8 | http://loinc.org | SARS-CoV-2 (COVID-19) Nsp2 gene [Presence] in Upper respiratory specimen by NAA with probe detection |
98069-8 | http://loinc.org | SARS-CoV-2 (COVID-19) Ab [Presence] in Saliva (oral fluid) by Rapid immunoassay |
98131-6 | http://loinc.org | SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Respiratory system specimen by NAA with probe detection |
98132-4 | http://loinc.org | SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Respiratory system specimen by NAA with probe detection |
98493-0 | http://loinc.org | SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Saliva (oral fluid) by NAA with probe detection |
98494-8 | http://loinc.org | SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Saliva (oral fluid) by NAA with probe detection |
99596-9 | http://loinc.org | SARS-CoV-2 (COVID-19) N protein IgG Ab [Presence] in Serum or Plasma by Immunoassay |
99597-7 | http://loinc.org | SARS-CoV-2 (COVID-19) S protein IgG Ab [Presence] in Serum or Plasma by Immunoassay |
99772-6 | http://loinc.org | SARS-CoV-2 stimulated gamma interferon [Interpretation] in Blood Qualitative |
Explanation of the columns that may appear on this page:
Level | A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies |
System | The source of the definition of the code (when the value set draws in codes defined elsewhere) |
Code | The code (used as the code in the resource instance) |
Display | The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application |
Definition | An explanation of the meaning of the concept |
Comments | Additional notes about how to use the code |