{ "resourceType" : "StructureMap", "id" : "ImmunizationMapV4", "language" : "en", "text" : { "status" : "generated", "div" : "

Generated Narrative: StructureMap ImmunizationMapV4

\r\n/// url = 'http://hl7.org/fhir/uv/omop/StructureMap/ImmunizationMapV4'\r\n/// version = '2.0.0-ballot'\r\n/// name = 'ImmunizationMapV4'\r\n/// title = 'Mapping Immunization resource to Drug Exposure OMOP Domain V4'\r\n/// status = 'active'\r\n/// description = 'This mapping maps FHIR Immunization instances to OMOP Drug Exposure Table objects.'\r\n\r\nuses "http://hl7.org/fhir/StructureDefinition/Immunization|4.0.1" alias Immunization as source\r\nuses "http://hl7.org/fhir/uv/omop/StructureDefinition/DrugExposure" alias DrugExposureTable as target\r\n\r\ngroup DrugExposure(source src : Immunization, target tgt : DrugExposureTable) {\r\n  src where (src.occurrence.empty().not()) then {\r\n    // OMOP Drug Exposure ID would be a map from FHIR ID to an external key\r\n    src as s -> tgt then {\r\n      s.identifier as i -> tgt then {\r\n        i.value as id -> tgt.drug_exposure_id = cast(id, 'integer');\r\n      } "immunizationIdFromIdentifier";\r\n    } "immunizationId";\r\n    // OMOP Person ID would be a map from the FHIR Immunization Patient reference to an external key\r\n    src.patient as subject -> tgt then {\r\n      subject.reference as s -> tgt.person_id = (%s.substring(%s.indexOf('/') + 1));\r\n    };\r\n    // OMOP Visit Occurrence ID would be a map from the FHIR Immunization Encounter reference to an external key\r\n    src.encounter as encounter -> tgt then {\r\n      encounter.reference as e -> tgt.visit_occurrence_id = (%e.substring(%e.indexOf('/') + 1));\r\n    };\r\n    src.vaccineCode as s -> tgt then {\r\n      s.coding first as sc -> tgt then {\r\n        sc.code as c ->  tgt.drug_concept_id = translate(c, 'http://hl7.org/fhir/uv/omop/ConceptMap/ImmunizationVaccine', 'code'),  tgt.drug_source_value = cast(c, 'string');\r\n      };\r\n    };\r\n    src.doseQuantity as s -> tgt then {\r\n      s.value as s -> tgt.quantity = cast(s, 'decimal');\r\n    };\r\n    src.route as s -> tgt then {\r\n      s.coding as sc -> tgt then {\r\n        sc.code as c ->  tgt.route_concept_id = translate(c, 'http://hl7.org/fhir/uv/omop/ConceptMap/ImmunizationRoute', 'code'),  tgt.route_source_value = cast(c, 'string');\r\n      };\r\n    };\r\n    src where (src.reportOrigin.empty()) -> tgt.drug_type_concept_id = 32818 "emptysource";\r\n    src.reportOrigin as s -> tgt then {\r\n      s.coding as c -> tgt then {\r\n        c.code as c -> tgt.drug_type_concept_id = translate(c, 'http://hl7.org/fhir/uv/omop/ConceptMap/ImmunizationSource', 'code');\r\n      };\r\n    };\r\n    src.occurrence : dateTime as odt ->  tgt.drug_exposure_start_date = (src.occurrence.toString().substring(0, 10)),  tgt.drug_exposure_start_datetime = cast(odt, 'dateTime'),  tgt.drug_exposure_end_date = (src.occurrence.toString().substring(0, 10)),  tgt.drug_exposure_end_datetime = cast(odt, 'dateTime');\r\n    src.lotNumber as s -> tgt.lot_number;\r\n  } "drugExposureMapping";\r\n}\r\n\r\n
" }, "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg", "valueCode" : "brr" }, { "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm", "valueInteger" : 2, "_valueInteger" : { "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom", "valueCanonical" : "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop" }] } }, { "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status", "valueCode" : "trial-use", "_valueCode" : { "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom", "valueCanonical" : "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop" }] } }], "url" : "http://hl7.org/fhir/uv/omop/StructureMap/ImmunizationMapV4", "identifier" : [{ "system" : "urn:ietf:rfc:3986", "value" : "urn:oid:2.16.840.1.113883.4.642.40.80.43.17" }], "version" : "2.0.0-ballot", "name" : "ImmunizationMapV4", "title" : "Mapping Immunization resource to Drug Exposure OMOP Domain V4", "status" : "active", "date" : "2026-11-06T00:33:48+00:00", "publisher" : "HL7 International / Biomedical Research and Regulation", "contact" : [{ "name" : "HL7 International / Biomedical Research and Regulation", "telecom" : [{ "system" : "url", "value" : "http://www.hl7.org/Special/committees/rcrim" }] }], "description" : "This mapping maps FHIR Immunization instances to OMOP Drug Exposure Table objects.", "jurisdiction" : [{ "coding" : [{ "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm", "code" : "001", "display" : "World" }] }], "structure" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/Immunization|4.0.1", "mode" : "source", "alias" : "Immunization" }, { "url" : "http://hl7.org/fhir/uv/omop/StructureDefinition/DrugExposure", "mode" : "target", "alias" : "DrugExposureTable" }], "group" : [{ "name" : "DrugExposure", "input" : [{ "name" : "src", "type" : "Immunization", "mode" : "source" }, { "name" : "tgt", "type" : "DrugExposureTable", "mode" : "target" }], "rule" : [{ "name" : "drugExposureMapping", "source" : [{ "context" : "src", "condition" : "src.occurrence.empty().not()" }], "rule" : [{ "name" : "immunizationId", "source" : [{ "context" : "src", "variable" : "s" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "immunizationIdFromIdentifier", "source" : [{ "context" : "s", "element" : "identifier", "variable" : "i" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "value", "source" : [{ "context" : "i", "element" : "value", "variable" : "id" }], "target" : [{ "context" : "tgt", "element" : "drug_exposure_id", "transform" : "cast", "parameter" : [{ "valueId" : "id" }, { "valueString" : "integer" }] }] }] }], "documentation" : "OMOP Drug Exposure ID would be a map from FHIR ID to an external key" }, { "name" : "patient", "source" : [{ "context" : "src", "element" : "patient", "variable" : "subject" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "reference", "source" : [{ "context" : "subject", "element" : "reference", "variable" : "s" }], "target" : [{ "context" : "tgt", "element" : "person_id", "transform" : "evaluate", "parameter" : [{ "valueString" : "%s.substring(%s.indexOf('/') + 1)" }] }] }], "documentation" : "OMOP Person ID would be a map from the FHIR Immunization Patient reference to an external key" }, { "name" : "encounter", "source" : [{ "context" : "src", "element" : "encounter", "variable" : "encounter" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "reference", "source" : [{ "context" : "encounter", "element" : "reference", "variable" : "e" }], "target" : [{ "context" : "tgt", "element" : "visit_occurrence_id", "transform" : "evaluate", "parameter" : [{ "valueString" : "%e.substring(%e.indexOf('/') + 1)" }] }] }], "documentation" : "OMOP Visit Occurrence ID would be a map from the FHIR Immunization Encounter reference to an external key" }, { "name" : "vaccineCode", "source" : [{ "context" : "src", "element" : "vaccineCode", "variable" : "s" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "coding", "source" : [{ "context" : "s", "element" : "coding", "listMode" : "first", "variable" : "sc" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "code", "source" : [{ "context" : "sc", "element" : "code", "variable" : "c" }], "target" : [{ "context" : "tgt", "element" : "drug_concept_id", "transform" : "translate", "parameter" : [{ "valueId" : "c" }, { "valueString" : "http://hl7.org/fhir/uv/omop/ConceptMap/ImmunizationVaccine" }, { "valueString" : "code" }] }, { "context" : "tgt", "element" : "drug_source_value", "transform" : "cast", "parameter" : [{ "valueId" : "c" }, { "valueString" : "string" }] }] }] }] }, { "name" : "doseQuantity", "source" : [{ "context" : "src", "element" : "doseQuantity", "variable" : "s" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "value", "source" : [{ "context" : "s", "element" : "value", "variable" : "s" }], "target" : [{ "context" : "tgt", "element" : "quantity", "transform" : "cast", "parameter" : [{ "valueId" : "s" }, { "valueString" : "decimal" }] }] }] }, { "name" : "route", "source" : [{ "context" : "src", "element" : "route", "variable" : "s" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "coding", "source" : [{ "context" : "s", "element" : "coding", "variable" : "sc" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "code", "source" : [{ "context" : "sc", "element" : "code", "variable" : "c" }], "target" : [{ "context" : "tgt", "element" : "route_concept_id", "transform" : "translate", "parameter" : [{ "valueId" : "c" }, { "valueString" : "http://hl7.org/fhir/uv/omop/ConceptMap/ImmunizationRoute" }, { "valueString" : "code" }] }, { "context" : "tgt", "element" : "route_source_value", "transform" : "cast", "parameter" : [{ "valueId" : "c" }, { "valueString" : "string" }] }] }] }] }, { "name" : "emptysource", "source" : [{ "context" : "src", "condition" : "src.reportOrigin.empty()" }], "target" : [{ "context" : "tgt", "element" : "drug_type_concept_id", "transform" : "copy", "parameter" : [{ "valueInteger" : 32818 }] }] }, { "name" : "reportOrigin", "source" : [{ "context" : "src", "element" : "reportOrigin", "variable" : "s" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "coding", "source" : [{ "context" : "s", "element" : "coding", "variable" : "c" }], "target" : [{ "context" : "tgt" }], "rule" : [{ "name" : "code", "source" : [{ "context" : "c", "element" : "code", "variable" : "c" }], "target" : [{ "context" : "tgt", "element" : "drug_type_concept_id", "transform" : "translate", "parameter" : [{ "valueId" : "c" }, { "valueString" : "http://hl7.org/fhir/uv/omop/ConceptMap/ImmunizationSource" }, { "valueString" : "code" }] }] }] }] }, { "name" : "occurrenceDateTime", "source" : [{ "context" : "src", "type" : "dateTime", "element" : "occurrence", "variable" : "odt" }], "target" : [{ "context" : "tgt", "element" : "drug_exposure_start_date", "transform" : "evaluate", "parameter" : [{ "valueString" : "src.occurrence.toString().substring(0, 10)" }] }, { "context" : "tgt", "element" : "drug_exposure_start_datetime", "transform" : "cast", "parameter" : [{ "valueId" : "odt" }, { "valueString" : "dateTime" }] }, { "context" : "tgt", "element" : "drug_exposure_end_date", "transform" : "evaluate", "parameter" : [{ "valueString" : "src.occurrence.toString().substring(0, 10)" }] }, { "context" : "tgt", "element" : "drug_exposure_end_datetime", "transform" : "cast", "parameter" : [{ "valueId" : "odt" }, { "valueString" : "dateTime" }] }] }, { "name" : "lotNumber", "source" : [{ "context" : "src", "element" : "lotNumber", "variable" : "s" }], "target" : [{ "context" : "tgt", "element" : "lot_number" }] }] }] }] }