@prefix fhir: . @prefix owl: . @prefix rdf: . @prefix rdfs: . @prefix xsd: . # - resource ------------------------------------------------------------------- a fhir:StructureMap ; fhir:nodeRole fhir:treeRoot ; fhir:id [ fhir:v "ObservationMap"] ; # fhir:language [ fhir:v "en"] ; # fhir:text [ fhir:status [ fhir:v "generated" ] ; fhir:div [ fhir:v "

Generated Narrative: StructureMap ObservationMap

Language: en

#xD;\n/// url = 'http://hl7.org/fhir/uv/omop/StructureMap/ObservationMap'#xD;\n/// name = 'ObservationMap'#xD;\n/// title = 'Mapping Observation resource to  Observation OMOP Domain'#xD;\n/// status = 'draft'#xD;\n#xD;\nuses \"http://hl7.org/fhir/StructureDefinition/Observation\" alias Observation as source#xD;\nuses \"http://hl7.org/fhir/uv/omop/StructureDefinition/Observation\" alias ObsTable as target#xD;\n#xD;\ngroup Observe(source src : Observation, target tgt : ObsTable) {#xD;\n  src where ('social-history' | 'imaging' | 'survey' | 'exam' | 'therapy' | 'activity' | 'procedure').supersetOf(Observation.category.coding.code) then {#xD;\n    src.code as s -> tgt then {#xD;\n      s.coding as sc -> tgt then {#xD;\n        sc.code as a -> tgt.observation_concept_id = a;#xD;\n      };#xD;\n    }; // src.id as id -> tgt.observation_id = cast(id, \"integer\");#xD;\n    src.effective : dateTime as a ->  tgt.observation_datetime = a,  tgt.observation_date = cast(a, 'date'); // src.subject as s -> tgt then {#xD;\n    src.effective : instant as einst ->  tgt.observation_datetime = cast(einst, 'dateTime'),  tgt.observation_date = cast(einst, 'date');#xD;\n    src.effective : Period as s -> tgt then {#xD;\n      s.start as ss ->  tgt.observation_datetime = cast(ss, 'dateTime'),  tgt.observation_date = cast(ss, 'date');#xD;\n    };#xD;\n    src.issued as s where (s.toDate != src.effectiveDate) -> tgt.observation_source_value = cast(s, 'string');#xD;\n    src.value : Quantity as s -> tgt then {#xD;\n      s.value as a -> tgt.value_as_number = a;#xD;\n      s.unit as b -> tgt.unit_concept_id = b;#xD;\n    }; // src.performer as s -> tgt then {#xD;\n    src.value : CodeableConcept as s -> tgt then {#xD;\n      s.coding as sc -> tgt then {#xD;\n        sc.code as a -> tgt.value_as_concept_id = a;#xD;\n      };#xD;\n    };#xD;\n    src.value : string as b -> tgt.value_as_string = b;#xD;\n    src.note as d -> tgt.observation_source_value = d;#xD;\n  } \"OnlyObs\";#xD;\n}#xD;\n#xD;\n

"^^rdf:XMLLiteral ] ] ; # fhir:extension ( [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg"^^xsd:anyURI ; fhir:l ] ; fhir:value [ a fhir:Code ; fhir:v "brr" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm"^^xsd:anyURI ; fhir:l ] ; fhir:value [ a fhir:Integer ; fhir:v 1 ; fhir:extension ( [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom"^^xsd:anyURI ; fhir:l ] ; fhir:value [ a fhir:Canonical ; fhir:v "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop"^^xsd:anyURI ; fhir:l ] ] ) ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status"^^xsd:anyURI ; fhir:l ] ; fhir:value [ a fhir:Code ; fhir:v "informative" ; fhir:extension ( [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom"^^xsd:anyURI ; fhir:l ] ; fhir:value [ a fhir:Canonical ; fhir:v "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop"^^xsd:anyURI ; fhir:l ] ] ) ] ] ) ; # fhir:url [ fhir:v "http://hl7.org/fhir/uv/omop/StructureMap/ObservationMap"^^xsd:anyURI ; fhir:l ] ; # fhir:version [ fhir:v "1.0.0"] ; # fhir:name [ fhir:v "ObservationMap"] ; # fhir:title [ fhir:v "Mapping Observation resource to Observation OMOP Domain"] ; # fhir:status [ fhir:v "draft"] ; # fhir:date [ fhir:v "2026-04-02T22:51:15+00:00"^^xsd:dateTime] ; # fhir:publisher [ fhir:v "HL7 International / Biomedical Research and Regulation"] ; # fhir:contact ( [ fhir:name [ fhir:v "HL7 International / Biomedical Research and Regulation" ] ; fhir:telecom ( [ fhir:system [ fhir:v "url" ] ; fhir:value [ fhir:v "http://www.hl7.org/Special/committees/rcrim" ] ] ) ] ) ; # fhir:description [ fhir:v "This mapping maps FHIR Observation instances that are NOT considered measurements to OMOP Observation Table objects. Currently, this is done by considering the category code and mapping 'social-history', 'imaging', 'survey', 'exam', 'therapy', 'activity', and 'procedure' Observations."] ; # fhir:jurisdiction ( [ fhir:coding ( [ fhir:system [ fhir:v "http://unstats.un.org/unsd/methods/m49/m49.htm"^^xsd:anyURI ; fhir:l ] ; fhir:code [ fhir:v "001" ] ; fhir:display [ fhir:v "World" ] ] ) ] ) ; # fhir:structure ( [ fhir:url [ fhir:v "http://hl7.org/fhir/StructureDefinition/Observation"^^xsd:anyURI ; fhir:l ] ; fhir:mode [ fhir:v "source" ] ; fhir:alias [ fhir:v "Observation" ] ] [ fhir:url [ fhir:v "http://hl7.org/fhir/uv/omop/StructureDefinition/Observation"^^xsd:anyURI ; fhir:l ] ; fhir:mode [ fhir:v "target" ] ; fhir:alias [ fhir:v "ObsTable" ] ] ) ; # fhir:group ( [ fhir:name [ fhir:v "Observe" ] ; fhir:input ( [ fhir:name [ fhir:v "src" ] ; fhir:type [ fhir:v "Observation" ] ; fhir:mode [ fhir:v "source" ] ] [ fhir:name [ fhir:v "tgt" ] ; fhir:type [ fhir:v "ObsTable" ] ; fhir:mode [ fhir:v "target" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "OnlyObs" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:condition [ fhir:v "('social-history' | 'imaging' | 'survey' | 'exam' | 'therapy' | 'activity' | 'procedure').supersetOf(Observation.category.coding.code)" ] ] ) ; fhir:rule ( [ fhir:name [ fhir:v "code" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "code" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "tgt" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "coding" ] ; fhir:source ( [ fhir:context [ fhir:v "s" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "sc" ] ] ) ; fhir:target ( [ fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "tgt" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "code" ] ; fhir:source ( [ fhir:context [ fhir:v "sc" ] ; fhir:element [ fhir:v "code" ] ; fhir:variable [ fhir:v "a" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "observation_concept_id" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "a" ] ] ) ] ) ] ) ] ) ; fhir:documentation [ fhir:v "src.id as id -> tgt.observation_id = cast(id, \"integer\");" ] ] [ fhir:name [ fhir:v "effectiveDateTime" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "dateTime" ] ; fhir:element [ fhir:v "effective" ] ; fhir:variable [ fhir:v "a" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "observation_datetime" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "a" ] ] ) ] [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "observation_date" ] ; fhir:transform [ fhir:v "cast" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "a" ] ] [ fhir:value [ a fhir:String ; fhir:v "date" ] ] ) ] ) ; fhir:documentation [ fhir:v "src.subject as s -> tgt then {" ] ] [ fhir:name [ fhir:v "effectiveInstant" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "instant" ] ; fhir:element [ fhir:v "effective" ] ; fhir:variable [ fhir:v "einst" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "observation_datetime" ] ; fhir:transform [ fhir:v "cast" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "einst" ] ] [ fhir:value [ a fhir:String ; fhir:v "dateTime" ] ] ) ] [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "observation_date" ] ; fhir:transform [ fhir:v "cast" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "einst" ] ] [ fhir:value [ a fhir:String ; fhir:v "date" ] ] ) ] ) ] [ fhir:name [ fhir:v "effectivePeriod" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "Period" ] ; fhir:element [ fhir:v "effective" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "tgt" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "start" ] ; fhir:source ( [ fhir:context [ fhir:v "s" ] ; fhir:element [ fhir:v "start" ] ; fhir:variable [ fhir:v "ss" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "observation_datetime" ] ; fhir:transform [ fhir:v "cast" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "ss" ] ] [ fhir:value [ a fhir:String ; fhir:v "dateTime" ] ] ) ] [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "observation_date" ] ; fhir:transform [ fhir:v "cast" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "ss" ] ] [ fhir:value [ a fhir:String ; fhir:v "date" ] ] ) ] ) ] ) ] [ fhir:name [ fhir:v "issued" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "issued" ] ; fhir:variable [ fhir:v "s" ] ; fhir:condition [ fhir:v "(s.toDate != src.effectiveDate)" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "observation_source_value" ] ; fhir:transform [ fhir:v "cast" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "s" ] ] [ fhir:value [ a fhir:String ; fhir:v "string" ] ] ) ] ) ] [ fhir:name [ fhir:v "valueQuantity" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "Quantity" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "tgt" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "value" ] ; fhir:source ( [ fhir:context [ fhir:v "s" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "a" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "value_as_number" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "a" ] ] ) ] ) ] [ fhir:name [ fhir:v "unit" ] ; fhir:source ( [ fhir:context [ fhir:v "s" ] ; fhir:element [ fhir:v "unit" ] ; fhir:variable [ fhir:v "b" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "unit_concept_id" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "b" ] ] ) ] ) ] ) ; fhir:documentation [ fhir:v "src.performer as s -> tgt then {" ] ] [ fhir:name [ fhir:v "valueCodeableConcept" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "CodeableConcept" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "s" ] ] ) ; fhir:target ( [ fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "tgt" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "coding" ] ; fhir:source ( [ fhir:context [ fhir:v "s" ] ; fhir:element [ fhir:v "coding" ] ; fhir:variable [ fhir:v "sc" ] ] ) ; fhir:target ( [ fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "tgt" ] ] ) ] ) ; fhir:rule ( [ fhir:name [ fhir:v "code" ] ; fhir:source ( [ fhir:context [ fhir:v "sc" ] ; fhir:element [ fhir:v "code" ] ; fhir:variable [ fhir:v "a" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "value_as_concept_id" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "a" ] ] ) ] ) ] ) ] ) ] [ fhir:name [ fhir:v "valueString" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:type [ fhir:v "string" ] ; fhir:element [ fhir:v "value" ] ; fhir:variable [ fhir:v "b" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "value_as_string" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "b" ] ] ) ] ) ] [ fhir:name [ fhir:v "note" ] ; fhir:source ( [ fhir:context [ fhir:v "src" ] ; fhir:element [ fhir:v "note" ] ; fhir:variable [ fhir:v "d" ] ] ) ; fhir:target ( [ fhir:context [ fhir:v "tgt" ] ; fhir:element [ fhir:v "observation_source_value" ] ; fhir:transform [ fhir:v "copy" ] ; fhir:parameter ( [ fhir:value [ a fhir:Id ; fhir:v "d" ] ] ) ] ) ] ) ] ) ] ) . # # -------------------------------------------------------------------------------------